RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PCDHA5Q9Y5H7 936 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 PRPF3O43395 683 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 KRT2P35908 639 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 PLCD1P51178 756 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 ZNF827Q17R98 1081 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 RCSD1Q6JBY9 416 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 WDR66Q8TBY9 1149 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 MRFAP1L1Q96HT8 127 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 PHF20Q9BVI0 1012 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 IL17RBQ9NRM6 502 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 SERTAD1Q9UHV2 236 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 TRPC5Q9UL62 973 aaPredicted RBP18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 CCDC88AQ3V6T2 1871 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
CNKSR1-202ENST00000374253 PTPREP23469 700 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 DDR1Q08345 913 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 NCAPHQ15003 741 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 ZNF174Q15697 407 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 XPO4Q9C0E2 1151 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 XBP1P17861 261 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 RBM6P78332 1123 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 C12orf60Q5U649 245 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 OLFM4Q6UX06 510 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 STAG2Q8N3U4 1231 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 TIGD1Q96MW7 591 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 MKNK2Q9HBH9 465 aa18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 RBM28Q9NW13 759 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-202ENST00000374253 ST5P78524 1137 aa18.33■□□□□ 0.53
CNKSR1-202ENST00000374253 GPKOWQ92917 476 aaPredicted RBP eCLIP18.33■□□□□ 0.53
CNKSR1-202ENST00000374253 C16orf45Q96MC5 204 aaPredicted RBP18.33■□□□□ 0.53
CNKSR1-202ENST00000374253 CD209Q9NNX6 404 aa18.33■□□□□ 0.53
CNKSR1-202ENST00000374253 DDAH1O94760 285 aa18.33■□□□□ 0.52
CNKSR1-202ENST00000374253 BMP6P22004 513 aa18.33■□□□□ 0.52
CNKSR1-202ENST00000374253 NPY5RQ15761 445 aa18.33■□□□□ 0.52
CNKSR1-202ENST00000374253 EPSTI1Q96J88 318 aa18.33■□□□□ 0.52
CNKSR1-202ENST00000374253 POLLQ9UGP5 575 aa18.33■□□□□ 0.52
CNKSR1-202ENST00000374253 MKRN1Q9UHC7 482 aaKnown RBP18.33■□□□□ 0.52
CNKSR1-202ENST00000374253 TUBE1Q9UJT0 475 aa18.33■□□□□ 0.52
CNKSR1-202ENST00000374253 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 CASP1P29466 404 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 CDC25BP30305 580 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 SBK1Q52WX2 424 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 LRRC8AQ8IWT6 810 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 FAM13BQ9NYF5 915 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 FAM237AA0A1B0GTK4 181 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 TRIM75PA6NK02 468 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 RIMBP2O15034 1052 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 CALM1P0DP23 149 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 CALM2P0DP24 149 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 CALM3P0DP25 149 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 PCP11498 1178 aaKnown RBP18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 BTDP43251 543 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 CPVLQ9H3G5 476 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 KAT14Q9H8E8 782 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 GGA1Q9UJY5 639 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 STX8Q9UNK0 236 aa18.32■□□□□ 0.52
CNKSR1-202ENST00000374253 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 PPP2R5BQ15173 497 aa18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 PIK3AP1Q6ZUJ8 805 aa18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 HSD3B7Q9H2F3 369 aa18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 KIAA1551Q9HCM1 1747 aa18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 A0A087X0B3 334 aa18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 NLRP5P59047 1200 aa18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 TMC6Q7Z403 805 aa18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 PNMA1Q8ND90 353 aa18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 DHX58Q96C10 678 aa18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 SRPRBQ9Y5M8 271 aaKnown RBP18.31■□□□□ 0.52
CNKSR1-202ENST00000374253 F8W031 263 aaPredicted RBP18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 BAG3O95817 575 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 GOLGA8HP0CJ92 632 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 TSPY3P0CV98 308 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 TSPY8P0CW00 308 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 CRY2Q49AN0 593 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 MFSD14BQ5SR56 506 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 RASGRP4Q8TDF6 673 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 NOL10Q9BSC4 688 aaKnown RBP18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 RTFDC1Q9BY42 306 aaPredicted RBP18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 USP27XA6NNY8 438 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 SCG2P13521 617 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 MDM2Q00987 491 aaPredicted RBP18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 POSTNQ15063 836 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 DPF2Q92785 391 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 RBM17Q96I25 401 aaKnown RBP18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 BPIFA3Q9BQP9 254 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 LAMB1P07942 1786 aa18.3■□□□□ 0.52
CNKSR1-202ENST00000374253 ADRA2BP18089 450 aa18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 AFMP43652 599 aa18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 STAMQ92783 540 aa18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 VWA3AA6NCI4 1184 aa18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 SKILP12757 684 aa18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 TRMT44Q8IYL2 757 aaKnown RBP18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 PROM2Q8N271 834 aa18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 TBC1D16Q8TBP0 767 aa18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 MAN1B1Q9UKM7 699 aa18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 CEP131Q9UPN4 1083 aa18.29■□□□□ 0.52
CNKSR1-202ENST00000374253 FANCCQ00597 558 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 UBR3Q6ZT12 1888 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 ZNF444Q8N0Y2 327 aaPredicted RBP18.28■□□□□ 0.52
CNKSR1-202ENST00000374253 BRMS1Q9HCU9 246 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms