RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 HSD3B7Q9H2F3 369 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 SERTAD1Q9UHV2 236 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 CEP131Q9UPN4 1083 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 IKBKBO14920 756 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 USP5P45974 858 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 PDILTQ8N807 584 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 WDR66Q8TBY9 1149 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 DYNLL2Q96FJ2 89 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 CSRNP2Q9H175 543 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 XDHP47989 1333 aa21.49■■□□□ 1.03
USP49-202ENST00000373010 TRIM75PA6NK02 468 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 WNT7AO00755 349 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 ATP1A3P13637 1013 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 RCSD1Q6JBY9 416 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 C16orf45Q96MC5 204 aaPredicted RBP21.48■■□□□ 1.03
USP49-202ENST00000373010 PRR29P0C7W0 189 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 SKILP12757 684 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 BMP6P22004 513 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 GPSM2P81274 684 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 NPY5RQ15761 445 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 GRAMD1CQ8IYS0 662 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 ZNF579Q8NAF0 562 aaKnown RBP21.48■■□□□ 1.03
USP49-202ENST00000373010 TSC1Q92574 1164 aa21.48■■□□□ 1.03
USP49-202ENST00000373010 MKRN1Q9UHC7 482 aaKnown RBP21.48■■□□□ 1.03
USP49-202ENST00000373010 NEMFO60524 1076 aa21.47■■□□□ 1.03
USP49-202ENST00000373010 SEPT12Q8IYM1 358 aa21.47■■□□□ 1.03
USP49-202ENST00000373010 AFF2P51816 1311 aa21.47■■□□□ 1.03
USP49-202ENST00000373010 VEGFAP15692 232 aaPredicted RBP21.47■■□□□ 1.03
USP49-202ENST00000373010 CCZ1BP86790 482 aa21.47■■□□□ 1.03
USP49-202ENST00000373010 CCZ1P86791 482 aaPredicted RBP21.47■■□□□ 1.03
USP49-202ENST00000373010 FANCCQ00597 558 aa21.47■■□□□ 1.03
USP49-202ENST00000373010 TFAP4Q01664 338 aa21.47■■□□□ 1.03
USP49-202ENST00000373010 HSP90AA2PQ14568 343 aaPredicted RBP21.47■■□□□ 1.03
USP49-202ENST00000373010 C12orf60Q5U649 245 aa21.47■■□□□ 1.03
USP49-202ENST00000373010 TMC6Q7Z403 805 aa21.47■■□□□ 1.03
USP49-202ENST00000373010 ZNF804AQ7Z570 1209 aa21.47■■□□□ 1.03
USP49-202ENST00000373010 RPGRQ92834 1020 aaKnown RBP21.47■■□□□ 1.03
USP49-202ENST00000373010 POSTNQ15063 836 aa21.46■■□□□ 1.03
USP49-202ENST00000373010 TMED8Q6PL24 325 aaPredicted RBP21.46■■□□□ 1.03
USP49-202ENST00000373010 OLFM4Q6UX06 510 aa21.46■■□□□ 1.03
USP49-202ENST00000373010 MYL5Q02045 173 aa21.46■■□□□ 1.03
USP49-202ENST00000373010 TNFRSF25Q93038 417 aa21.46■■□□□ 1.03
USP49-202ENST00000373010 MAN1B1Q9UKM7 699 aa21.46■■□□□ 1.03
USP49-202ENST00000373010 ZBTB22O15209 634 aa21.45■■□□□ 1.02
USP49-202ENST00000373010 ELOA2Q8IYF1 753 aaPredicted RBP21.45■■□□□ 1.02
USP49-202ENST00000373010 OSBPL5Q9H0X9 879 aaPredicted RBP21.45■■□□□ 1.02
USP49-202ENST00000373010 IL17RBQ9NRM6 502 aa21.45■■□□□ 1.02
USP49-202ENST00000373010 USP27XA6NNY8 438 aa21.45■■□□□ 1.02
USP49-202ENST00000373010 ADAMTS3O15072 1205 aa21.45■■□□□ 1.02
USP49-202ENST00000373010 RRP9O43818 475 aaKnown RBP21.45■■□□□ 1.02
USP49-202ENST00000373010 GYS1P13807 737 aa21.45■■□□□ 1.02
USP49-202ENST00000373010 ZNF174Q15697 407 aa21.45■■□□□ 1.02
USP49-202ENST00000373010 TPD52L1Q16890 204 aaPredicted RBP21.45■■□□□ 1.02
USP49-202ENST00000373010 TGFBRAP1Q8WUH2 860 aa21.45■■□□□ 1.02
USP49-202ENST00000373010 BRMS1Q9HCU9 246 aa21.45■■□□□ 1.02
USP49-202ENST00000373010 HOOK1Q9UJC3 728 aaKnown RBP21.45■■□□□ 1.02
USP49-202ENST00000373010 ACTN4O43707 911 aaKnown RBP21.44■■□□□ 1.02
USP49-202ENST00000373010 SCG2P13521 617 aa21.44■■□□□ 1.02
USP49-202ENST00000373010 EPSTI1Q96J88 318 aa21.44■■□□□ 1.02
USP49-202ENST00000373010 BCL11BQ9C0K0 894 aaPredicted RBP21.44■■□□□ 1.02
USP49-202ENST00000373010 IMPACTQ9P2X3 320 aa21.44■■□□□ 1.02
USP49-202ENST00000373010 UBR3Q6ZT12 1888 aa21.44■■□□□ 1.02
USP49-202ENST00000373010 RIOK3O14730 519 aaKnown RBP21.44■■□□□ 1.02
USP49-202ENST00000373010 UFL1O94874 794 aa21.44■■□□□ 1.02
USP49-202ENST00000373010 GSDMDP57764 484 aa21.44■■□□□ 1.02
USP49-202ENST00000373010 DPF2Q92785 391 aa21.44■■□□□ 1.02
USP49-202ENST00000373010 KAT14Q9H8E8 782 aa21.44■■□□□ 1.02
USP49-202ENST00000373010 A0A087X0B3 334 aa21.43■■□□□ 1.02
USP49-202ENST00000373010 ADRA2BP18089 450 aa21.43■■□□□ 1.02
USP49-202ENST00000373010 GSTO1P78417 241 aa21.43■■□□□ 1.02
USP49-202ENST00000373010 ZNF827Q17R98 1081 aa21.43■■□□□ 1.02
USP49-202ENST00000373010 SLC44A5Q8NCS7 719 aa21.43■■□□□ 1.02
USP49-202ENST00000373010 SAP30BPQ9UHR5 308 aaKnown RBP21.43■■□□□ 1.02
USP49-202ENST00000373010 SERPINB2P05120 415 aa21.43■■□□□ 1.02
USP49-202ENST00000373010 TNNT1P13805 278 aa21.43■■□□□ 1.02
USP49-202ENST00000373010 FANCLQ9NW38 375 aa21.43■■□□□ 1.02
USP49-202ENST00000373010 NAV1Q8NEY1 1877 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 USP17L3A6NCW0 530 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 USP17L4A6NCW7 530 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 ONECUT3O60422 494 aaPredicted RBP21.42■■□□□ 1.02
USP49-202ENST00000373010 BAG3O95817 575 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 GTF2F1P35269 517 aaKnown RBP eCLIP21.42■■□□□ 1.02
USP49-202ENST00000373010 NLRP5P59047 1200 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 PFKFB3Q16875 520 aaPredicted RBP21.42■■□□□ 1.02
USP49-202ENST00000373010 TTC38Q5R3I4 469 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 ARMCX5Q6P1M9 558 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 USP17L1Q7RTZ2 530 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 MAPKAPK5Q8IW41 473 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 SMARCE1Q969G3 411 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 DHX58Q96C10 678 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 MKNK2Q9HBH9 465 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 CD209Q9NNX6 404 aa21.42■■□□□ 1.02
USP49-202ENST00000373010 SARSP49591 514 aaKnown RBP21.41■■□□□ 1.02
USP49-202ENST00000373010 CRY2Q49AN0 593 aa21.41■■□□□ 1.02
USP49-202ENST00000373010 C15orf52Q6ZUT6 534 aaKnown RBP21.41■■□□□ 1.02
USP49-202ENST00000373010 PNMA1Q8ND90 353 aa21.41■■□□□ 1.02
USP49-202ENST00000373010 CERKQ8TCT0 537 aa21.41■■□□□ 1.02
USP49-202ENST00000373010 PLCD1P51178 756 aa21.41■■□□□ 1.02
USP49-202ENST00000373010 PPP4CP60510 307 aa21.41■■□□□ 1.02
USP49-202ENST00000373010 ST5P78524 1137 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms