RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 ZNF287Q9HBT7 754 aa28.12■■■□□ 2.09
CITED4-201ENST00000372638 DIAPH3Q9NSV4 1193 aa28.12■■■□□ 2.09
CITED4-201ENST00000372638 CPA4Q9UI42 421 aa28.12■■■□□ 2.09
CITED4-201ENST00000372638 ROBO3Q96MS0 1386 aa28.12■■■□□ 2.09
CITED4-201ENST00000372638 ADGRA2Q96PE1 1338 aa28.11■■■□□ 2.09
CITED4-201ENST00000372638 USP14P54578 494 aa28.11■■■□□ 2.09
CITED4-201ENST00000372638 MFAP1P55081 439 aaKnown RBP28.11■■■□□ 2.09
CITED4-201ENST00000372638 PKN2Q16513 984 aaKnown RBP28.11■■■□□ 2.09
CITED4-201ENST00000372638 STK11IPQ8N1F8 1099 aa28.11■■■□□ 2.09
CITED4-201ENST00000372638 KIAA1683Q9H0B3 1180 aa28.11■■■□□ 2.09
CITED4-201ENST00000372638 SLC3A2P08195 630 aaKnown RBP28.1■■■□□ 2.09
CITED4-201ENST00000372638 OSBPP22059 807 aa28.1■■■□□ 2.09
CITED4-201ENST00000372638 ARHGEF6Q15052 776 aa28.1■■■□□ 2.09
CITED4-201ENST00000372638 VPS53Q5VIR6 699 aa28.1■■■□□ 2.09
CITED4-201ENST00000372638 ACER1Q8TDN7 264 aa28.1■■■□□ 2.09
CITED4-201ENST00000372638 SMCR8Q8TEV9 937 aaPredicted RBP28.1■■■□□ 2.09
CITED4-201ENST00000372638 ABHD8Q96I13 439 aa28.1■■■□□ 2.09
CITED4-201ENST00000372638 EMILIN3Q9NT22 766 aa28.1■■■□□ 2.09
CITED4-201ENST00000372638 CCDC171Q6TFL3 1326 aa28.09■■■□□ 2.09
CITED4-201ENST00000372638 FOXP2O15409 715 aa28.09■■■□□ 2.09
CITED4-201ENST00000372638 GSPT1P15170 499 aaKnown RBP28.09■■■□□ 2.09
CITED4-201ENST00000372638 ALX1Q15699 326 aa28.09■■■□□ 2.09
CITED4-201ENST00000372638 C12orf42Q96LP6 360 aa28.09■■■□□ 2.09
CITED4-201ENST00000372638 HOXA7P31268 230 aaPredicted RBP28.08■■■□□ 2.09
CITED4-201ENST00000372638 PPARAQ07869 468 aa28.08■■■□□ 2.09
CITED4-201ENST00000372638 KIF22Q14807 665 aa28.08■■■□□ 2.09
CITED4-201ENST00000372638 ZYXQ15942 572 aaKnown RBP28.08■■■□□ 2.09
CITED4-201ENST00000372638 CWC27Q6UX04 472 aaKnown RBP28.08■■■□□ 2.09
CITED4-201ENST00000372638 ZNF589Q86UQ0 364 aaPredicted RBP28.08■■■□□ 2.09
CITED4-201ENST00000372638 EFCC1Q9HA90 598 aa28.08■■■□□ 2.09
CITED4-201ENST00000372638 TRIM17Q9Y577 477 aa28.08■■■□□ 2.09
CITED4-201ENST00000372638 HSPD1P10809 573 aaKnown RBP28.07■■■□□ 2.08
CITED4-201ENST00000372638 RASA1P20936 1047 aa28.07■■■□□ 2.08
CITED4-201ENST00000372638 ZNF444Q8N0Y2 327 aaPredicted RBP28.07■■■□□ 2.08
CITED4-201ENST00000372638 CCDC136Q96JN2 1154 aa28.07■■■□□ 2.08
CITED4-201ENST00000372638 ASCC2Q9H1I8 757 aaPredicted RBP28.07■■■□□ 2.08
CITED4-201ENST00000372638 ARHGEF10LQ9HCE6 1279 aa28.07■■■□□ 2.08
CITED4-201ENST00000372638 BCRP11274 1271 aa28.06■■■□□ 2.08
CITED4-201ENST00000372638 IRX3P78415 501 aaPredicted RBP28.06■■■□□ 2.08
CITED4-201ENST00000372638 LACTBP83111 547 aaPredicted RBP28.06■■■□□ 2.08
CITED4-201ENST00000372638 ICA1Q05084 483 aa28.06■■■□□ 2.08
CITED4-201ENST00000372638 PDE4BQ07343 736 aa28.06■■■□□ 2.08
CITED4-201ENST00000372638 OTOP1Q7RTM1 612 aa28.06■■■□□ 2.08
CITED4-201ENST00000372638 KANSL2Q9H9L4 492 aa28.06■■■□□ 2.08
CITED4-201ENST00000372638 A0A1W2PRG0 241 aa28.05■■■□□ 2.08
CITED4-201ENST00000372638 SH2D4AQ9H788 454 aa28.05■■■□□ 2.08
CITED4-201ENST00000372638 FGAP02671 866 aa28.04■■■□□ 2.08
CITED4-201ENST00000372638 GCLCP48506 637 aaPredicted RBP28.04■■■□□ 2.08
CITED4-201ENST00000372638 FBXO46Q6PJ61 603 aaPredicted RBP28.04■■■□□ 2.08
CITED4-201ENST00000372638 CCDC85CA6NKD9 419 aa28.03■■■□□ 2.08
CITED4-201ENST00000372638 PRDM1O75626 825 aa28.03■■■□□ 2.08
CITED4-201ENST00000372638 SIAH1Q8IUQ4 282 aa28.03■■■□□ 2.08
CITED4-201ENST00000372638 ANAPC4Q9UJX5 808 aa28.03■■■□□ 2.08
CITED4-201ENST00000372638 USP17L15C9J2P7 530 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 USP17L13C9JLJ4 530 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 USP17L11C9JVI0 530 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 USP17L18D6R9N7 530 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 USP17L22D6RA61 530 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 USP17L17D6RBQ6 530 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 USP17L19D6RCP7 530 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 USP17L20D6RJB6 530 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 CAP1Q01518 475 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 USP17L24Q0WX57 530 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 CLEC10AQ8IUN9 316 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 P2RX7Q99572 595 aaKnown RBP28.02■■■□□ 2.08
CITED4-201ENST00000372638 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.02■■■□□ 2.08
CITED4-201ENST00000372638 TMX2Q9Y320 296 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 ZMYM6O95789 1325 aa28.02■■■□□ 2.08
CITED4-201ENST00000372638 EEF2P13639 858 aaKnown RBP28.01■■■□□ 2.07
CITED4-201ENST00000372638 VCAM1P19320 739 aa28.01■■■□□ 2.07
CITED4-201ENST00000372638 ANKRD13CQ8N6S4 541 aa28.01■■■□□ 2.07
CITED4-201ENST00000372638 GNRH1P01148 92 aa28■■■□□ 2.07
CITED4-201ENST00000372638 PSMC4P43686 418 aa28■■■□□ 2.07
CITED4-201ENST00000372638 ATP2B2Q01814 1243 aa28■■■□□ 2.07
CITED4-201ENST00000372638 CTDSPL2Q05D32 466 aa28■■■□□ 2.07
CITED4-201ENST00000372638 ARHGAP39Q9C0H5 1083 aa28■■■□□ 2.07
CITED4-201ENST00000372638 FAM110CQ1W6H9 321 aa27.99■■■□□ 2.07
CITED4-201ENST00000372638 CATSPERGQ6ZRH7 1159 aa27.99■■■□□ 2.07
CITED4-201ENST00000372638 RUFY2Q8WXA3 655 aa27.99■■■□□ 2.07
CITED4-201ENST00000372638 VCPKMTQ9H867 229 aa27.99■■■□□ 2.07
CITED4-201ENST00000372638 PTPN22Q9Y2R2 807 aa27.99■■■□□ 2.07
CITED4-201ENST00000372638 ECM2O94769 699 aaPredicted RBP27.98■■■□□ 2.07
CITED4-201ENST00000372638 FMNL1O95466 1100 aaPredicted RBP27.98■■■□□ 2.07
CITED4-201ENST00000372638 HERVK_113P62684 666 aa27.98■■■□□ 2.07
CITED4-201ENST00000372638 GTF3C2Q8WUA4 911 aaPredicted RBP27.98■■■□□ 2.07
CITED4-201ENST00000372638 LPAR1Q92633 364 aa27.98■■■□□ 2.07
CITED4-201ENST00000372638 NYAP2Q9P242 653 aa27.98■■■□□ 2.07
CITED4-201ENST00000372638 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.98■■■□□ 2.07
CITED4-201ENST00000372638 GREB1LQ9C091 1923 aaPredicted RBP27.98■■■□□ 2.07
CITED4-201ENST00000372638 TSPY3P0CV98 308 aa27.97■■■□□ 2.07
CITED4-201ENST00000372638 TSPY8P0CW00 308 aa27.97■■■□□ 2.07
CITED4-201ENST00000372638 CHMLP26374 656 aa27.97■■■□□ 2.07
CITED4-201ENST00000372638 FCGRTP55899 365 aa27.97■■■□□ 2.07
CITED4-201ENST00000372638 TFAP4Q01664 338 aa27.97■■■□□ 2.07
CITED4-201ENST00000372638 NEDD1Q8NHV4 660 aa27.97■■■□□ 2.07
CITED4-201ENST00000372638 RPAP3Q9H6T3 665 aaPredicted RBP27.97■■■□□ 2.07
CITED4-201ENST00000372638 HPS5Q9UPZ3 1129 aa27.97■■■□□ 2.07
CITED4-201ENST00000372638 IGKV6D-41A0A0C4DH26 115 aa27.96■■■□□ 2.07
CITED4-201ENST00000372638 HOXD10P28358 340 aa27.96■■■□□ 2.07
CITED4-201ENST00000372638 CTGFP29279 349 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms