RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 NOSTRINQ8IVI9 506 aa18.22■□□□□ 0.51
CHD1L-203ENST00000369259 EPB41P11171 864 aaKnown RBP18.22■□□□□ 0.51
CHD1L-203ENST00000369259 ELF1P32519 619 aa18.22■□□□□ 0.51
CHD1L-203ENST00000369259 KRT9P35527 623 aa18.22■□□□□ 0.51
CHD1L-203ENST00000369259 CCT6AP40227 531 aaKnown RBP18.22■□□□□ 0.51
CHD1L-203ENST00000369259 SND1Q7KZF4 910 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHD1L-203ENST00000369259 UBE3BQ7Z3V4 1068 aa18.22■□□□□ 0.51
CHD1L-203ENST00000369259 CAGE1Q8TC20 777 aa18.22■□□□□ 0.51
CHD1L-203ENST00000369259 JAKMIP2Q96AA8 810 aa18.22■□□□□ 0.51
CHD1L-203ENST00000369259 CD248Q9HCU0 757 aa18.22■□□□□ 0.51
CHD1L-203ENST00000369259 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
CHD1L-203ENST00000369259 N4BP3O15049 544 aa18.21■□□□□ 0.51
CHD1L-203ENST00000369259 IARSP41252 1262 aaKnown RBP18.21■□□□□ 0.51
CHD1L-203ENST00000369259 TOB1P50616 345 aaPredicted RBP18.21■□□□□ 0.51
CHD1L-203ENST00000369259 TIMM10P62072 90 aa18.21■□□□□ 0.51
CHD1L-203ENST00000369259 PREPLQ4J6C6 727 aaPredicted RBP18.21■□□□□ 0.51
CHD1L-203ENST00000369259 CCDC70Q6NSX1 233 aa18.21■□□□□ 0.51
CHD1L-203ENST00000369259 CHP1Q99653 195 aa18.21■□□□□ 0.51
CHD1L-203ENST00000369259 RXRAP19793 462 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 BRD2P25440 801 aaKnown RBP18.2■□□□□ 0.5
CHD1L-203ENST00000369259 MICALCLQ6ZW33 695 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 YTHDF3Q7Z739 585 aaKnown RBP18.2■□□□□ 0.5
CHD1L-203ENST00000369259 XAGE3Q8WTP9 111 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 GPR108Q9NPR9 543 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 LIMA1Q9UHB6 759 aaKnown RBP18.2■□□□□ 0.5
CHD1L-203ENST00000369259 ZNF213O14771 459 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 SCP2P22307 547 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 KRT31Q15323 416 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 IQCEQ6IPM2 695 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 MIEF2Q96C03 454 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
CHD1L-203ENST00000369259 PLEKHG1Q9ULL1 1385 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 LRRC10BA6NIK2 292 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 MYL6BP14649 208 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 CCDC122Q5T0U0 273 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 EHBP1Q8NDI1 1231 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 PAGR1Q9BTK6 254 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 SRPRBQ9Y5M8 271 aaKnown RBP18.19■□□□□ 0.5
CHD1L-203ENST00000369259 LMO7Q8WWI1 1683 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 PPP1R3GB7ZBB8 358 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 PDCLQ13371 301 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 NTRK3Q16288 839 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 IP6K1Q92551 441 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
CHD1L-203ENST00000369259 DIP2BQ9P265 1576 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 NWD2Q9ULI1 1742 aa18.19■□□□□ 0.5
CHD1L-203ENST00000369259 UBN2Q6ZU65 1347 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 PDE2AO00408 941 aaPredicted RBP18.18■□□□□ 0.5
CHD1L-203ENST00000369259 NF2P35240 595 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 AMOTQ4VCS5 1084 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 TTMPQ5BVD1 217 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 ALS2CLQ60I27 953 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 APOA5Q6Q788 366 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 ATG9AQ7Z3C6 839 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 ABTB2Q8N961 1025 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 RUBCNQ92622 972 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 RRP36Q96EU6 259 aaKnown RBP18.18■□□□□ 0.5
CHD1L-203ENST00000369259 VEZTQ9HBM0 779 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 KLC4Q9NSK0 619 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 MST1RQ04912 1400 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 BTBD18B2RXH4 712 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 SH2B2O14492 632 aaPredicted RBP18.18■□□□□ 0.5
CHD1L-203ENST00000369259 RANBP6O60518 1105 aaKnown RBP18.18■□□□□ 0.5
CHD1L-203ENST00000369259 SMTNP53814 917 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 C2orf54Q08AI8 447 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 RILPL1Q5EBL4 403 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 USP49Q70CQ1 688 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 ARL8AQ96BM9 186 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 VPS16Q9H269 839 aa18.18■□□□□ 0.5
CHD1L-203ENST00000369259 ZEB2O60315 1214 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 AFMP43652 599 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 COPB1P53618 953 aaKnown RBP18.17■□□□□ 0.5
CHD1L-203ENST00000369259 HERVK_113P62684 666 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 SAFBQ15424 915 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHD1L-203ENST00000369259 ZNF662Q6ZS27 426 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 MICU3Q86XE3 530 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 SMYD4Q8IYR2 804 aaPredicted RBP18.17■□□□□ 0.5
CHD1L-203ENST00000369259 N4BP2L2Q92802 583 aaPredicted RBP18.17■□□□□ 0.5
CHD1L-203ENST00000369259 RUFY1Q96T51 708 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 CSRNP2Q9H175 543 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 TMCO5BA8MYB1 307 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 ZNF185O15231 689 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 NAP1L1P55209 391 aaKnown RBP18.17■□□□□ 0.5
CHD1L-203ENST00000369259 WLSQ5T9L3 541 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 LMBR1LQ6UX01 489 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 MMGT1Q8N4V1 131 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 GSDMAQ96QA5 445 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 VCPKMTQ9H867 229 aa18.17■□□□□ 0.5
CHD1L-203ENST00000369259 DDX60Q8IY21 1712 aaKnown RBP18.17■□□□□ 0.5
CHD1L-203ENST00000369259 ANO9A1A5B4 782 aa18.16■□□□□ 0.5
CHD1L-203ENST00000369259 ZFYP08048 801 aaPredicted RBP18.16■□□□□ 0.5
CHD1L-203ENST00000369259 SPAG1Q07617 926 aa18.16■□□□□ 0.5
CHD1L-203ENST00000369259 ACTN3Q08043 901 aaPredicted RBP18.16■□□□□ 0.5
CHD1L-203ENST00000369259 PLCB4Q15147 1175 aa18.16■□□□□ 0.5
CHD1L-203ENST00000369259 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
CHD1L-203ENST00000369259 SH3RF1Q7Z6J0 888 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms