RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.11■□□□□ 0.97
PRDM1-202ENST00000369091 GOLGA8KD6RF30 607 aa21.11■□□□□ 0.97
PRDM1-202ENST00000369091 ACTN4O43707 911 aaKnown RBP21.11■□□□□ 0.97
PRDM1-202ENST00000369091 AFMP43652 599 aa21.11■□□□□ 0.97
PRDM1-202ENST00000369091 FILIP1LQ4L180 1135 aa21.11■□□□□ 0.97
PRDM1-202ENST00000369091 NGDNQ8NEJ9 315 aaKnown RBP21.11■□□□□ 0.97
PRDM1-202ENST00000369091 VPS16Q9H269 839 aa21.11■□□□□ 0.97
PRDM1-202ENST00000369091 FAM184BQ9ULE4 1060 aa21.11■□□□□ 0.97
PRDM1-202ENST00000369091 TIMM10P62072 90 aa21.1■□□□□ 0.97
PRDM1-202ENST00000369091 FBXO2Q9UK22 296 aaPredicted RBP21.1■□□□□ 0.97
PRDM1-202ENST00000369091 SLIT1O75093 1534 aa21.1■□□□□ 0.97
PRDM1-202ENST00000369091 RNF113AO15541 343 aaKnown RBP21.1■□□□□ 0.97
PRDM1-202ENST00000369091 MYL6BP14649 208 aa21.1■□□□□ 0.97
PRDM1-202ENST00000369091 KRT9P35527 623 aa21.1■□□□□ 0.97
PRDM1-202ENST00000369091 CUL4BQ13620 913 aa21.1■□□□□ 0.97
PRDM1-202ENST00000369091 AIDAQ96BJ3 306 aa21.1■□□□□ 0.97
PRDM1-202ENST00000369091 SENP2Q9HC62 589 aa21.1■□□□□ 0.97
PRDM1-202ENST00000369091 KDM6AO15550 1401 aaPredicted RBP21.1■□□□□ 0.97
PRDM1-202ENST00000369091 NDUFA10O95299 355 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 DDX58O95786 925 aaKnown RBP21.09■□□□□ 0.97
PRDM1-202ENST00000369091 DPYDQ12882 1025 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 IQCA1Q86XH1 822 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 KIRREL3Q8IZU9 778 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 TRIML1Q8N9V2 468 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 C4BP0C0L5 1744 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 PDHBP11177 359 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 METAP2P50579 478 aaKnown RBP eCLIP21.09■□□□□ 0.97
PRDM1-202ENST00000369091 HERVK_113P62684 666 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 IMMTQ16891 758 aaKnown RBP21.09■□□□□ 0.97
PRDM1-202ENST00000369091 TAB2Q9NYJ8 693 aa21.09■□□□□ 0.97
PRDM1-202ENST00000369091 EPN1Q9Y6I3 576 aaPredicted RBP21.09■□□□□ 0.97
PRDM1-202ENST00000369091 ATXN2Q99700 1313 aaKnown RBP21.09■□□□□ 0.97
PRDM1-202ENST00000369091 TOB1P50616 345 aaPredicted RBP21.08■□□□□ 0.97
PRDM1-202ENST00000369091 KRT31Q15323 416 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 CCDC122Q5T0U0 273 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 NAA35Q5VZE5 725 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 ZNF530Q6P9A1 599 aaPredicted RBP21.08■□□□□ 0.97
PRDM1-202ENST00000369091 RALYLQ86SE5 291 aaKnown RBP21.08■□□□□ 0.97
PRDM1-202ENST00000369091 N4BP3O15049 544 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 NAP1L1P55209 391 aaKnown RBP21.08■□□□□ 0.97
PRDM1-202ENST00000369091 GUCY1A3Q02108 690 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 APBA1Q02410 837 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 PPARAQ07869 468 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 PAPD7Q5XG87 772 aaKnown RBP21.08■□□□□ 0.97
PRDM1-202ENST00000369091 MICU3Q86XE3 530 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 CEP57Q86XR8 500 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 CCDC13Q8IYE1 715 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 ELOA2Q8IYF1 753 aaPredicted RBP21.08■□□□□ 0.97
PRDM1-202ENST00000369091 MYL10Q9BUA6 226 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 DMGDHQ9UI17 866 aaKnown RBP21.08■□□□□ 0.97
PRDM1-202ENST00000369091 CTNND2Q9UQB3 1225 aa21.08■□□□□ 0.97
PRDM1-202ENST00000369091 PPP1R12AO14974 1030 aaPredicted RBP21.08■□□□□ 0.96
PRDM1-202ENST00000369091 FGAP02671 866 aa21.08■□□□□ 0.96
PRDM1-202ENST00000369091 SSBP05455 408 aaKnown RBP eCLIP21.08■□□□□ 0.96
PRDM1-202ENST00000369091 GCFC2P16383 781 aaKnown RBP21.08■□□□□ 0.96
PRDM1-202ENST00000369091 SKOR1P84550 965 aa21.08■□□□□ 0.96
PRDM1-202ENST00000369091 SLC7A5Q01650 507 aa21.08■□□□□ 0.96
PRDM1-202ENST00000369091 PPARDQ03181 441 aa21.08■□□□□ 0.96
PRDM1-202ENST00000369091 CKAP4Q07065 602 aaKnown RBP21.08■□□□□ 0.96
PRDM1-202ENST00000369091 CCDC40Q4G0X9 1142 aa21.08■□□□□ 0.96
PRDM1-202ENST00000369091 NAIF1Q69YI7 327 aaPredicted RBP21.08■□□□□ 0.96
PRDM1-202ENST00000369091 EGFL6Q8IUX8 553 aa21.08■□□□□ 0.96
PRDM1-202ENST00000369091 NWD2Q9ULI1 1742 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 PTPRUQ92729 1446 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 CEP85LQ5SZL2 805 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 UBE3BQ7Z3V4 1068 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 CTAGE1Q96RT6 745 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 TACO1Q9BSH4 297 aaKnown RBP21.07■□□□□ 0.96
PRDM1-202ENST00000369091 VCPKMTQ9H867 229 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 ITIH6Q6UXX5 1313 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 A0A087X0B3 334 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 BTBD18B2RXH4 712 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 RANBP6O60518 1105 aaKnown RBP21.07■□□□□ 0.96
PRDM1-202ENST00000369091 PDIA6Q15084 440 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 NCOA7Q8NI08 942 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 RNPC3Q96LT9 517 aaKnown RBP21.07■□□□□ 0.96
PRDM1-202ENST00000369091 SLC40A1Q9NP59 571 aa21.07■□□□□ 0.96
PRDM1-202ENST00000369091 RICTORQ6R327 1708 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 PATL2C9JE40 543 aaKnown RBP21.06■□□□□ 0.96
PRDM1-202ENST00000369091 PTPREP23469 700 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 SF3B2Q13435 895 aaKnown RBP21.06■□□□□ 0.96
PRDM1-202ENST00000369091 SPATA20Q8TB22 786 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 SGSM3Q96HU1 749 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 LRRC1Q9BTT6 524 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 OVOS2A0A0G2JMS6 1433 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 PIK3C2AO00443 1686 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 RASSF9O75901 435 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 SEC24CP53992 1094 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 NEXNQ0ZGT2 675 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 TRIM29Q14134 588 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 WASHC4Q2M389 1173 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 WLSQ5T9L3 541 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 ZNF473Q8WTR7 871 aaKnown RBP21.06■□□□□ 0.96
PRDM1-202ENST00000369091 DDX20Q9UHI6 824 aaKnown RBP21.06■□□□□ 0.96
PRDM1-202ENST00000369091 PCDHB6Q9Y5E3 794 aa21.06■□□□□ 0.96
PRDM1-202ENST00000369091 OPA1O60313 960 aa21.05■□□□□ 0.96
PRDM1-202ENST00000369091 MATR3P43243 847 aaKnown RBP eCLIP21.05■□□□□ 0.96
PRDM1-202ENST00000369091 HDLBPQ00341 1268 aaKnown RBP21.05■□□□□ 0.96
PRDM1-202ENST00000369091 IFT88Q13099 833 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms