RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 COG6Q9Y2V7 657 aa19.44■□□□□ 0.7
CKS1B-202ENST00000368436 TCRBV5S4A2TA0A5A2 114 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP17L15C9J2P7 530 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP17L13C9JLJ4 530 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP17L11C9JVI0 530 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP17L18D6R9N7 530 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP17L22D6RA61 530 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP17L17D6RBQ6 530 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP17L19D6RCP7 530 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP17L20D6RJB6 530 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 RAB11FIP3O75154 756 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP14P54578 494 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 USP17L24Q0WX57 530 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 RAB3GAP1Q15042 981 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 CATSPERGQ6ZRH7 1159 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 NECAB2Q7Z6G3 386 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 ACER1Q8TDN7 264 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 FEZ1Q99689 392 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 CRNKL1Q9BZJ0 848 aaKnown RBP19.43■□□□□ 0.7
CKS1B-202ENST00000368436 PORCNQ9H237 461 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 ZNF532Q9HCE3 1301 aa19.43■□□□□ 0.7
CKS1B-202ENST00000368436 APBB1O00213 710 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 GOLIM4O00461 696 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 EVI5O60447 810 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 CNMDO75829 334 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 POLR3DP05423 398 aaPredicted RBP19.42■□□□□ 0.7
CKS1B-202ENST00000368436 IFIT2P09913 472 aaKnown RBP19.42■□□□□ 0.7
CKS1B-202ENST00000368436 GUCY1A2P33402 732 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 MNX1P50219 401 aaPredicted RBP19.42■□□□□ 0.7
CKS1B-202ENST00000368436 ZYXQ15942 572 aaKnown RBP19.42■□□□□ 0.7
CKS1B-202ENST00000368436 MORN1Q5T089 497 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 GPR142Q7Z601 462 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 TRMT44Q8IYL2 757 aaKnown RBP19.42■□□□□ 0.7
CKS1B-202ENST00000368436 DIS3LQ8TF46 1054 aaKnown RBP19.42■□□□□ 0.7
CKS1B-202ENST00000368436 PAGR1Q9BTK6 254 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 CABP5Q9NP86 173 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 RABGAP1Q9Y3P9 1069 aa19.42■□□□□ 0.7
CKS1B-202ENST00000368436 PDE3AQ14432 1141 aa19.41■□□□□ 0.7
CKS1B-202ENST00000368436 LBX2Q6XYB7 198 aa19.41■□□□□ 0.7
CKS1B-202ENST00000368436 PLEKHH3Q7Z736 793 aa19.41■□□□□ 0.7
CKS1B-202ENST00000368436 MCM9Q9NXL9 1143 aa19.41■□□□□ 0.7
CKS1B-202ENST00000368436 OGDHLQ9ULD0 1010 aa19.41■□□□□ 0.7
CKS1B-202ENST00000368436 MYH8P13535 1937 aa19.41■□□□□ 0.7
CKS1B-202ENST00000368436 PRKAR2AP13861 404 aaKnown RBP19.4■□□□□ 0.7
CKS1B-202ENST00000368436 VCAM1P19320 739 aa19.4■□□□□ 0.7
CKS1B-202ENST00000368436 RGS2P41220 211 aa19.4■□□□□ 0.7
CKS1B-202ENST00000368436 EVX2Q03828 476 aa19.4■□□□□ 0.7
CKS1B-202ENST00000368436 CCAR1Q8IX12 1150 aaKnown RBP19.4■□□□□ 0.7
CKS1B-202ENST00000368436 LCORLQ8N3X6 602 aa19.4■□□□□ 0.7
CKS1B-202ENST00000368436 DNAJC2Q99543 621 aaKnown RBP19.4■□□□□ 0.7
CKS1B-202ENST00000368436 CHMP4BQ9H444 224 aaKnown RBP19.4■□□□□ 0.7
CKS1B-202ENST00000368436 MYH7P12883 1935 aa19.4■□□□□ 0.7
CKS1B-202ENST00000368436 ZKSCAN1P17029 563 aaPredicted RBP19.39■□□□□ 0.69
CKS1B-202ENST00000368436 SEPT2Q15019 361 aa19.39■□□□□ 0.69
CKS1B-202ENST00000368436 SDR42E1Q8WUS8 393 aa19.39■□□□□ 0.69
CKS1B-202ENST00000368436 EDC3Q96F86 508 aaKnown RBP19.39■□□□□ 0.69
CKS1B-202ENST00000368436 NBPF3Q9H094 633 aa19.39■□□□□ 0.69
CKS1B-202ENST00000368436 DCP1AQ9NPI6 582 aaPredicted RBP19.39■□□□□ 0.69
CKS1B-202ENST00000368436 RLFQ13129 1914 aa19.39■□□□□ 0.69
CKS1B-202ENST00000368436 ATP5JP18859 108 aa19.38■□□□□ 0.69
CKS1B-202ENST00000368436 CCNA1P78396 465 aa19.38■□□□□ 0.69
CKS1B-202ENST00000368436 CACNB2Q08289 660 aaPredicted RBP19.38■□□□□ 0.69
CKS1B-202ENST00000368436 MAP2K5Q13163 448 aa19.38■□□□□ 0.69
CKS1B-202ENST00000368436 CCL14Q16627 93 aa19.38■□□□□ 0.69
CKS1B-202ENST00000368436 APBA2Q99767 749 aa19.38■□□□□ 0.69
CKS1B-202ENST00000368436 PAG1Q9NWQ8 432 aa19.38■□□□□ 0.69
CKS1B-202ENST00000368436 BAZ2AQ9UIF9 1905 aaKnown RBP19.38■□□□□ 0.69
CKS1B-202ENST00000368436 A0A1W2PPC1 479 aa19.37■□□□□ 0.69
CKS1B-202ENST00000368436 A0A1W2PRG0 241 aa19.37■□□□□ 0.69
CKS1B-202ENST00000368436 GLRX3O76003 335 aaKnown RBP19.37■□□□□ 0.69
CKS1B-202ENST00000368436 ADD2P35612 726 aa19.37■□□□□ 0.69
CKS1B-202ENST00000368436 BOLA2Q9H3K6 86 aa19.37■□□□□ 0.69
CKS1B-202ENST00000368436 C11orf49Q9H6J7 331 aa19.37■□□□□ 0.69
CKS1B-202ENST00000368436 RPAP3Q9H6T3 665 aaPredicted RBP19.37■□□□□ 0.69
CKS1B-202ENST00000368436 BTBD7Q9P203 1132 aa19.37■□□□□ 0.69
CKS1B-202ENST00000368436 SWAP70Q9UH65 585 aa19.37■□□□□ 0.69
CKS1B-202ENST00000368436 RCAN3Q9UKA8 241 aa19.37■□□□□ 0.69
CKS1B-202ENST00000368436 FRMPD3Q5JV73 1810 aa19.37■□□□□ 0.69
CKS1B-202ENST00000368436 SLC15A5A6NIM6 579 aa19.36■□□□□ 0.69
CKS1B-202ENST00000368436 SPDYE16A6NNV3 312 aaPredicted RBP19.36■□□□□ 0.69
CKS1B-202ENST00000368436 CYP2D6P10635 497 aa19.36■□□□□ 0.69
CKS1B-202ENST00000368436 PTPREP23469 700 aa19.36■□□□□ 0.69
CKS1B-202ENST00000368436 LHX8Q68G74 356 aa19.36■□□□□ 0.69
CKS1B-202ENST00000368436 HAUS7Q99871 368 aa19.36■□□□□ 0.69
CKS1B-202ENST00000368436 ARMT1Q9H993 441 aa19.36■□□□□ 0.69
CKS1B-202ENST00000368436 ATP8A2Q9NTI2 1148 aa19.36■□□□□ 0.69
CKS1B-202ENST00000368436 A0A0G2JMZ2 1700 aa19.35■□□□□ 0.69
CKS1B-202ENST00000368436 MPHOSPH10O00566 681 aaKnown RBP19.35■□□□□ 0.69
CKS1B-202ENST00000368436 CCND3P30281 292 aaPredicted RBP19.35■□□□□ 0.69
CKS1B-202ENST00000368436 SLFNL1Q499Z3 407 aa19.35■□□□□ 0.69
CKS1B-202ENST00000368436 TMEM179Q6ZVK1 233 aa19.35■□□□□ 0.69
CKS1B-202ENST00000368436 CWC22Q9HCG8 908 aaKnown RBP19.35■□□□□ 0.69
CKS1B-202ENST00000368436 RANBP2P49792 3224 aaKnown RBP19.34■□□□□ 0.69
CKS1B-202ENST00000368436 PRKAB2O43741 272 aa19.34■□□□□ 0.69
CKS1B-202ENST00000368436 HOXC6P09630 235 aa19.34■□□□□ 0.69
CKS1B-202ENST00000368436 COG2Q14746 738 aa19.34■□□□□ 0.69
CKS1B-202ENST00000368436 SLC44A5Q8NCS7 719 aa19.34■□□□□ 0.69
CKS1B-202ENST00000368436 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.34■□□□□ 0.69
CKS1B-202ENST00000368436 BCL11AQ9H165 835 aa19.34■□□□□ 0.69
CKS1B-202ENST00000368436 HOXC10Q9NYD6 342 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms