RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 DIAPH3Q9NSV4 1193 aa23.75■■□□□ 1.39
H3F3A-204ENST00000366816 TAOK2Q9UL54 1235 aa23.75■■□□□ 1.39
H3F3A-204ENST00000366816 SLC45A1Q9Y2W3 748 aa23.75■■□□□ 1.39
H3F3A-204ENST00000366816 ADGRA2Q96PE1 1338 aa23.75■■□□□ 1.39
H3F3A-204ENST00000366816 PRDM1O75626 825 aa23.74■■□□□ 1.39
H3F3A-204ENST00000366816 NEFLP07196 543 aa23.74■■□□□ 1.39
H3F3A-204ENST00000366816 TMEM179Q6ZVK1 233 aa23.74■■□□□ 1.39
H3F3A-204ENST00000366816 MKNK2Q9HBH9 465 aa23.74■■□□□ 1.39
H3F3A-204ENST00000366816 A0A1W2PRG0 241 aa23.73■■□□□ 1.39
H3F3A-204ENST00000366816 RASA1P20936 1047 aa23.73■■□□□ 1.39
H3F3A-204ENST00000366816 PPARAQ07869 468 aa23.73■■□□□ 1.39
H3F3A-204ENST00000366816 USP17L2Q6R6M4 530 aa23.73■■□□□ 1.39
H3F3A-204ENST00000366816 SIAH1Q8IUQ4 282 aa23.73■■□□□ 1.39
H3F3A-204ENST00000366816 ERO1AQ96HE7 468 aa23.73■■□□□ 1.39
H3F3A-204ENST00000366816 CCDC17Q96LX7 622 aa23.73■■□□□ 1.39
H3F3A-204ENST00000366816 ARHGAP39Q9C0H5 1083 aa23.73■■□□□ 1.39
H3F3A-204ENST00000366816 ROBO3Q96MS0 1386 aa23.73■■□□□ 1.39
H3F3A-204ENST00000366816 CENPBP07199 599 aaPredicted RBP23.72■■□□□ 1.39
H3F3A-204ENST00000366816 HSPD1P10809 573 aaKnown RBP23.72■■□□□ 1.39
H3F3A-204ENST00000366816 CTDSPL2Q05D32 466 aa23.72■■□□□ 1.39
H3F3A-204ENST00000366816 SMCR8Q8TEV9 937 aaPredicted RBP23.72■■□□□ 1.39
H3F3A-204ENST00000366816 ABHD8Q96I13 439 aa23.72■■□□□ 1.39
H3F3A-204ENST00000366816 CCDC136Q96JN2 1154 aa23.72■■□□□ 1.39
H3F3A-204ENST00000366816 KIAA1683Q9H0B3 1180 aa23.72■■□□□ 1.39
H3F3A-204ENST00000366816 ASCC2Q9H1I8 757 aaPredicted RBP23.72■■□□□ 1.39
H3F3A-204ENST00000366816 INCENPQ9NQS7 918 aa23.72■■□□□ 1.39
H3F3A-204ENST00000366816 TRIM17Q9Y577 477 aa23.72■■□□□ 1.39
H3F3A-204ENST00000366816 CCDC171Q6TFL3 1326 aa23.72■■□□□ 1.39
H3F3A-204ENST00000366816 LOC285556D6RIA3 1793 aa23.72■■□□□ 1.39
H3F3A-204ENST00000366816 OTOP1Q7RTM1 612 aa23.71■■□□□ 1.39
H3F3A-204ENST00000366816 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.71■■□□□ 1.39
H3F3A-204ENST00000366816 MYH8P13535 1937 aa23.71■■□□□ 1.39
H3F3A-204ENST00000366816 FGAP02671 866 aa23.7■■□□□ 1.38
H3F3A-204ENST00000366816 BCRP11274 1271 aa23.7■■□□□ 1.38
H3F3A-204ENST00000366816 OSBPP22059 807 aa23.7■■□□□ 1.38
H3F3A-204ENST00000366816 LACTBP83111 547 aaPredicted RBP23.7■■□□□ 1.38
H3F3A-204ENST00000366816 ATP2B2Q01814 1243 aa23.7■■□□□ 1.38
H3F3A-204ENST00000366816 PABPC4Q13310 644 aaKnown RBP eCLIP23.7■■□□□ 1.383e-12■■■■■ 40.1
H3F3A-204ENST00000366816 PNMA3Q9UL41 463 aa23.7■■□□□ 1.38
H3F3A-204ENST00000366816 HIP1O00291 1037 aa23.69■■□□□ 1.38
H3F3A-204ENST00000366816 CTGFP29279 349 aa23.69■■□□□ 1.38
H3F3A-204ENST00000366816 ICA1Q05084 483 aa23.69■■□□□ 1.38
H3F3A-204ENST00000366816 ALX1Q15699 326 aa23.69■■□□□ 1.38
H3F3A-204ENST00000366816 KIAA1755Q5JYT7 1200 aa23.69■■□□□ 1.38
H3F3A-204ENST00000366816 ZNF444Q8N0Y2 327 aaPredicted RBP23.69■■□□□ 1.38
H3F3A-204ENST00000366816 P2RX7Q99572 595 aaKnown RBP23.69■■□□□ 1.38
H3F3A-204ENST00000366816 IL25Q9H293 177 aa23.69■■□□□ 1.38
H3F3A-204ENST00000366816 EFCC1Q9HA90 598 aa23.69■■□□□ 1.38
H3F3A-204ENST00000366816 TACC3Q9Y6A5 838 aa23.69■■□□□ 1.38
H3F3A-204ENST00000366816 PEX10O60683 326 aa23.68■■□□□ 1.38
H3F3A-204ENST00000366816 EEF2P13639 858 aaKnown RBP23.68■■□□□ 1.38
H3F3A-204ENST00000366816 HOXA7P31268 230 aaPredicted RBP23.68■■□□□ 1.38
H3F3A-204ENST00000366816 USP14P54578 494 aa23.68■■□□□ 1.38
H3F3A-204ENST00000366816 IRX3P78415 501 aaPredicted RBP23.68■■□□□ 1.38
H3F3A-204ENST00000366816 ANKRD13CQ8N6S4 541 aa23.68■■□□□ 1.38
H3F3A-204ENST00000366816 C12orf42Q96LP6 360 aa23.68■■□□□ 1.38
H3F3A-204ENST00000366816 KANSL2Q9H9L4 492 aa23.68■■□□□ 1.38
H3F3A-204ENST00000366816 SLC3A2P08195 630 aaKnown RBP23.67■■□□□ 1.38
H3F3A-204ENST00000366816 VCAM1P19320 739 aa23.67■■□□□ 1.38
H3F3A-204ENST00000366816 PDE4BQ07343 736 aa23.67■■□□□ 1.38
H3F3A-204ENST00000366816 FAM47AQ5JRC9 791 aa23.67■■□□□ 1.38
H3F3A-204ENST00000366816 ARHGEF10LQ9HCE6 1279 aa23.67■■□□□ 1.38
H3F3A-204ENST00000366816 ZSWIM8A7E2V4 1837 aa23.67■■□□□ 1.38
H3F3A-204ENST00000366816 MFAP1P55081 439 aaKnown RBP23.66■■□□□ 1.38
H3F3A-204ENST00000366816 HAND2P61296 217 aa23.66■■□□□ 1.38
H3F3A-204ENST00000366816 KIF22Q14807 665 aa23.66■■□□□ 1.38
H3F3A-204ENST00000366816 PKN2Q16513 984 aaKnown RBP23.66■■□□□ 1.38
H3F3A-204ENST00000366816 ZNF287Q9HBT7 754 aa23.66■■□□□ 1.38
H3F3A-204ENST00000366816 TMX2Q9Y320 296 aa23.66■■□□□ 1.38
H3F3A-204ENST00000366816 CHMLP26374 656 aa23.65■■□□□ 1.38
H3F3A-204ENST00000366816 PSMC4P43686 418 aa23.65■■□□□ 1.38
H3F3A-204ENST00000366816 SPICE1Q8N0Z3 855 aa23.65■■□□□ 1.38
H3F3A-204ENST00000366816 TRIM47Q96LD4 638 aa23.65■■□□□ 1.38
H3F3A-204ENST00000366816 RPAP3Q9H6T3 665 aaPredicted RBP23.65■■□□□ 1.38
H3F3A-204ENST00000366816 ANAPC4Q9UJX5 808 aa23.65■■□□□ 1.38
H3F3A-204ENST00000366816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.65■■□□□ 1.38
H3F3A-204ENST00000366816 USP17L15C9J2P7 530 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 USP17L13C9JLJ4 530 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 USP17L11C9JVI0 530 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 USP17L18D6R9N7 530 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 USP17L22D6RA61 530 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 USP17L17D6RBQ6 530 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 USP17L19D6RCP7 530 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 USP17L20D6RJB6 530 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 FMNL1O95466 1100 aaPredicted RBP23.64■■□□□ 1.37
H3F3A-204ENST00000366816 HERVK_113P62684 666 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 TFAP4Q01664 338 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 USP17L24Q0WX57 530 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 FBXO46Q6PJ61 603 aaPredicted RBP23.64■■□□□ 1.37
H3F3A-204ENST00000366816 POTEEQ6S8J3 1075 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 CATSPERGQ6ZRH7 1159 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 HPS5Q9UPZ3 1129 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 PTPN22Q9Y2R2 807 aa23.64■■□□□ 1.37
H3F3A-204ENST00000366816 IGKV6D-41A0A0C4DH26 115 aa23.63■■□□□ 1.37
H3F3A-204ENST00000366816 CCDC85CA6NKD9 419 aa23.63■■□□□ 1.37
H3F3A-204ENST00000366816 TSPY3P0CV98 308 aa23.63■■□□□ 1.37
H3F3A-204ENST00000366816 TSPY8P0CW00 308 aa23.63■■□□□ 1.37
H3F3A-204ENST00000366816 GCLCP48506 637 aaPredicted RBP23.63■■□□□ 1.37
H3F3A-204ENST00000366816 RAD21O60216 631 aa23.62■■□□□ 1.37
H3F3A-204ENST00000366816 ARHGEF6Q15052 776 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms