RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 PPP2R5EQ16537 467 aa6.74□□□□□ -1.33
RNU6-560P-201ENST00000364007 LETMD1Q6P1Q0 360 aa6.74□□□□□ -1.33
RNU6-560P-201ENST00000364007 OGFOD3Q6PK18 319 aa6.74□□□□□ -1.33
RNU6-560P-201ENST00000364007 TNKS2Q9H2K2 1166 aa6.74□□□□□ -1.33
RNU6-560P-201ENST00000364007 STK10O94804 968 aaKnown RBP6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 IGLV1-40P01703 118 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 GUCY2CP25092 1073 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 GBP1P32455 592 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 INTS3Q68E01 1043 aaKnown RBP6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 UNC5AQ6ZN44 842 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 ZNF765Q7L2R6 523 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 FAM214BQ7L5A3 538 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 SHKBP1Q8TBC3 707 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 CYB5D2Q8WUJ1 264 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 TM9SF2Q99805 663 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 CEP131Q9UPN4 1083 aa6.73□□□□□ -1.33
RNU6-560P-201ENST00000364007 A0A1W2PQH9 124 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 ANKS3Q6ZW76 656 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 TTC6Q86TZ1 520 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 TMEM192Q8IY95 271 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 OR6P1Q8NGX9 317 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 DNAJB8Q8NHS0 232 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 GIMAP7Q8NHV1 300 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 HEXIM2Q96MH2 286 aaKnown RBP6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 DBNDD2Q9BQY9 259 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 PRKAG3Q9UGI9 489 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 LTBP3Q9NS15 1303 aa6.72□□□□□ -1.33
RNU6-560P-201ENST00000364007 IGSF3O75054 1194 aa6.71□□□□□ -1.34
RNU6-560P-201ENST00000364007 HNRNPLLQ8WVV9 542 aaKnown RBP6.71□□□□□ -1.34
RNU6-560P-201ENST00000364007 DNAJC2Q99543 621 aaKnown RBP6.71□□□□□ -1.34
RNU6-560P-201ENST00000364007 SEMA6BQ9H3T3 888 aa6.71□□□□□ -1.34
RNU6-560P-201ENST00000364007 COL17A1Q9UMD9 1497 aaPredicted RBP6.71□□□□□ -1.34
RNU6-560P-201ENST00000364007 CASP7P55210 303 aa6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 RBL2Q08999 1139 aa6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 PRSS36Q5K4E3 855 aa6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 TAB3Q8N5C8 712 aaPredicted RBP6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 ZNF512BQ96KM6 892 aaPredicted RBP6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 SLC6A18Q96N87 628 aa6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 OSBPL1AQ9BXW6 950 aa6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 ATG3Q9NT62 314 aa6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 TPX2Q9ULW0 747 aaKnown RBP6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 U3KQE9 123 aa6.7□□□□□ -1.34
RNU6-560P-201ENST00000364007 KLF4O43474 513 aa6.69□□□□□ -1.34
RNU6-560P-201ENST00000364007 CYP27C1Q4G0S4 372 aa6.69□□□□□ -1.34
RNU6-560P-201ENST00000364007 DUSP27Q5VZP5 1158 aa6.69□□□□□ -1.34
RNU6-560P-201ENST00000364007 ZDHHC13Q8IUH4 622 aa6.69□□□□□ -1.34
RNU6-560P-201ENST00000364007 MICAL1Q8TDZ2 1067 aa6.69□□□□□ -1.34
RNU6-560P-201ENST00000364007 VWCEQ96DN2 955 aa6.69□□□□□ -1.34
RNU6-560P-201ENST00000364007 KREMEN1Q96MU8 473 aa6.69□□□□□ -1.34
RNU6-560P-201ENST00000364007 PCDHB10Q9UN67 800 aa6.69□□□□□ -1.34
RNU6-560P-201ENST00000364007 PRR19A6NJB7 356 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 PRR33A8MZF0 331 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 GSC2O15499 205 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 LRRN2O75325 713 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 ITGB7P26010 798 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 CCNFP41002 786 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 C19orf47Q8N9M1 422 aaKnown RBP6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 FAM181AQ8N9Y4 354 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 PMFBP1Q8TBY8 1022 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 PRDM5Q9NQX1 630 aaPredicted RBP6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 FAM86C1Q9NVL1 165 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 ACTR10Q9NZ32 417 aa6.68□□□□□ -1.34
RNU6-560P-201ENST00000364007 C9IYK1 514 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 CLEC3AO75596 197 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 CBX7O95931 251 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 ETV3P41162 512 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 CYP27A1Q02318 531 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 TNNI3KQ59H18 835 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 SFRP5Q5T4F7 317 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 TDRD10Q5VZ19 366 aaKnown RBP6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 LARP1BQ659C4 914 aaKnown RBP6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 PPFIBP1Q86W92 1011 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 CKAP2LQ8IYA6 745 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 CELF2-AS1Q8N7Q2 184 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 UBXN4Q92575 508 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 ARMC5Q96C12 935 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 LRRC4CQ9HCJ2 640 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 ST7Q9NRC1 585 aa6.67□□□□□ -1.34
RNU6-560P-201ENST00000364007 TP53P04637 393 aaPredicted RBP6.66□□□□□ -1.34
RNU6-560P-201ENST00000364007 HOXA10P31260 410 aaPredicted RBP6.66□□□□□ -1.34
RNU6-560P-201ENST00000364007 NBPF12Q5TAG4 269 aaPredicted RBP6.66□□□□□ -1.34
RNU6-560P-201ENST00000364007 Q96M66 194 aa6.66□□□□□ -1.34
RNU6-560P-201ENST00000364007 HIRIP3Q9BW71 556 aaPredicted RBP6.66□□□□□ -1.34
RNU6-560P-201ENST00000364007 SUCOQ9UBS9 1254 aaKnown RBP6.66□□□□□ -1.34
RNU6-560P-201ENST00000364007 GTF2IRD1Q9UHL9 959 aa6.66□□□□□ -1.34
RNU6-560P-201ENST00000364007 ZNF214Q9UL59 606 aaPredicted RBP6.66□□□□□ -1.34
RNU6-560P-201ENST00000364007 R3HCC1Q9Y3T6 440 aaKnown RBP6.66□□□□□ -1.34
RNU6-560P-201ENST00000364007 B2RBV5 119 aa6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 IGF2BP3O00425 579 aaKnown RBP eCLIP6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 CYP26A1O43174 497 aa6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 TGFB1P01137 390 aa6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 PMS1P54277 932 aaKnown RBP6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 OXCT1P55809 520 aa6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 CHMP4BP1P59074 171 aa6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 RAB33AQ14088 237 aa6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 SLC51AQ86UW1 340 aa6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 RNF141Q8WVD5 230 aa6.65□□□□□ -1.34
RNU6-560P-201ENST00000364007 KLHL6Q8WZ60 621 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms