RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 GPR39O43194 453 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 DNAJA2O60884 412 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 EFCAB14O75071 495 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PGRP06401 933 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CPB1P15086 417 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PMS1P54277 932 aaKnown RBP4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PPP2R2AP63151 447 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 GSTM4Q03013 218 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TBC1D8BQ0IIM8 1120 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 STRN3Q13033 797 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PIN1Q13526 163 aaPredicted RBP4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 POU4F3Q15319 338 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 NXNQ6DKJ4 435 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 NSMFQ6X4W1 530 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TRIM67Q6ZTA4 783 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 APBB1IPQ7Z5R6 666 aaPredicted RBP4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SYT9Q86SS6 491 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SPATS2Q86XZ4 545 aaKnown RBP4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TCEAL8Q8IYN2 117 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TTC8Q8TAM2 541 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TTC9Q92623 222 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TNFRSF25Q93038 417 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 WNT8BQ93098 351 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CHMP4CQ96CF2 233 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ZC3H12CQ9C0D7 883 aaKnown RBP4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SMG9Q9H0W8 520 aaKnown RBP4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SH2B1Q9NRF2 756 aaPredicted RBP4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SFMBT1Q9UHJ3 866 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TRIM33Q9UPN9 1127 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 FAM86C2PA6NEL3 165 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MAN1A2O60476 641 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 RFPL1O75677 317 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 DNAJC8O75937 253 aaPredicted RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 LDHAP00338 332 aaKnown RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 AVPP01185 164 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ASLP04424 464 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PABPC1P11940 636 aaKnown RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 FLT3P36888 993 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 NEK4P51957 841 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 YARSP54577 528 aaKnown RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 RALBP1Q15311 655 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 GFOD2Q3B7J2 385 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 YOD1Q5VVQ6 348 aaPredicted RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 HEATR6Q6AI08 1181 aaKnown RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TRIM46Q7Z4K8 759 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ZBTB46Q86UZ6 589 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SLFN12Q8IYM2 578 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 LRRN4CLQ8ND94 238 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 FBXO41Q8TF61 875 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MTMR8Q96EF0 704 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SLC39A13Q96H72 371 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MPHOSPH6Q99547 160 aaKnown RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TTC1Q99614 292 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TRIM39Q9HCM9 518 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 OSGEPQ9NPF4 335 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 AVENQ9NQS1 362 aaPredicted RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 AASDHPPTQ9NRN7 309 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 BSDC1Q9NW68 430 aaPredicted RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SUCOQ9UBS9 1254 aaKnown RBP4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SLC6A14Q9UN76 642 aa4.84□□□□□ -1.63
RNU6-1249P-201ENST00000363237 FAM83GA6ND36 823 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 RGS13O14921 159 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PRODHO43272 600 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 OPA1O60313 960 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ZEB2O60315 1214 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ITGAVP06756 1048 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 U2AF1L5P0DN76 240 aaPredicted RBP4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 BMP1P13497 986 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 EPHA1P21709 976 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 GRK4P32298 578 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 GABREP78334 506 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PIP4K2BP78356 416 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 U2AF1Q01081 240 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 C19orf57Q0VDD7 668 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 STAT4Q14765 748 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 MLC1Q15049 377 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ZRSR2Q15696 482 aaKnown RBP4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 HSP90AB4PQ58FF6 505 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 HP1BP3Q5SSJ5 553 aaPredicted RBP4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SYCP2LQ5T4T6 812 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 FAM102BQ5T8I3 360 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ZNF468Q5VIY5 522 aaPredicted RBP4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 FAM117BQ6P1L5 589 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 MCATQ8IVS2 390 aaKnown RBP4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PHACTR4Q8IZ21 702 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 FAM13CQ8NE31 585 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 USP7Q93009 1102 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ACSF2Q96CM8 615 aaPredicted RBP4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 HOOK2Q96ED9 719 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SLC6A18Q96N87 628 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SMAD5Q99717 465 aaKnown RBP4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 HAUS7Q99871 368 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 LPIN3Q9BQK8 851 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 WNT10AQ9GZT5 417 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CCDC86Q9H6F5 360 aaKnown RBP4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SUSD2Q9UGT4 822 aa4.83□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PRAMEF27A3QJZ7 478 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 DCDC2CA8MYV0 355 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 IFRD1O00458 451 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 NOP56O00567 594 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms