RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 GOLGA8AA7E2F4 631 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 TMEM179Q6ZVK1 233 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 MICU3Q86XE3 530 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 MAP3K14Q99558 947 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 CABP5Q9NP86 173 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 MTMR4Q9NYA4 1195 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 GREB1LQ9C091 1923 aaPredicted RBP21.07■□□□□ 0.96
CCDC7-203ENST00000362006 MPHOSPH10O00566 681 aaKnown RBP21.07■□□□□ 0.96
CCDC7-203ENST00000362006 CPLX1O14810 134 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 CDKL5O76039 1030 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 TOP1P11387 765 aaKnown RBP21.07■□□□□ 0.96
CCDC7-203ENST00000362006 EPHX2P34913 555 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 HMGN5P82970 282 aaKnown RBP21.07■□□□□ 0.96
CCDC7-203ENST00000362006 ABCB5Q2M3G0 1257 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 DCPSQ96C86 337 aaKnown RBP21.07■□□□□ 0.96
CCDC7-203ENST00000362006 CEP95Q96GE4 821 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCDC7-203ENST00000362006 STX8Q9UNK0 236 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 WDR90Q96KV7 1748 aa21.07■□□□□ 0.96
CCDC7-203ENST00000362006 FAM196BA6NMK8 535 aa21.06■□□□□ 0.96
CCDC7-203ENST00000362006 FANCBQ8NB91 859 aa21.06■□□□□ 0.96
CCDC7-203ENST00000362006 KANSL2Q9H9L4 492 aa21.06■□□□□ 0.96
CCDC7-203ENST00000362006 KIF3AQ9Y496 699 aa21.06■□□□□ 0.96
CCDC7-203ENST00000362006 TTLL1O95922 423 aa21.05■□□□□ 0.96
CCDC7-203ENST00000362006 RTN1Q16799 776 aa21.05■□□□□ 0.96
CCDC7-203ENST00000362006 DCAF15Q66K64 600 aa21.05■□□□□ 0.96
CCDC7-203ENST00000362006 SMARCC2Q8TAQ2 1214 aa21.05■□□□□ 0.96
CCDC7-203ENST00000362006 RBM28Q9NW13 759 aaKnown RBP21.05■□□□□ 0.96
CCDC7-203ENST00000362006 NUCB2P80303 420 aa21.05■□□□□ 0.96
CCDC7-203ENST00000362006 TROAPQ12815 778 aa21.05■□□□□ 0.96
CCDC7-203ENST00000362006 PNMA8AQ86V59 439 aaPredicted RBP21.05■□□□□ 0.96
CCDC7-203ENST00000362006 PNMA1Q8ND90 353 aa21.05■□□□□ 0.96
CCDC7-203ENST00000362006 TMEM47Q9BQJ4 181 aa21.05■□□□□ 0.96
CCDC7-203ENST00000362006 NCOA5Q9HCD5 579 aaKnown RBP21.05■□□□□ 0.96
CCDC7-203ENST00000362006 GINM1Q9NU53 330 aa21.05■□□□□ 0.96
CCDC7-203ENST00000362006 GJB2P29033 226 aa21.04■□□□□ 0.96
CCDC7-203ENST00000362006 NSUN7Q8NE18 718 aaKnown RBP21.04■□□□□ 0.96
CCDC7-203ENST00000362006 NUP133Q8WUM0 1156 aa21.04■□□□□ 0.96
CCDC7-203ENST00000362006 SRCAPQ6ZRS2 3230 aa21.04■□□□□ 0.96
CCDC7-203ENST00000362006 PDCP20941 246 aa21.04■□□□□ 0.96
CCDC7-203ENST00000362006 SUPT20HL1Q3ZLR7 823 aa21.04■□□□□ 0.96
CCDC7-203ENST00000362006 CTCFLQ8NI51 663 aaPredicted RBP21.04■□□□□ 0.96
CCDC7-203ENST00000362006 MYL10Q9BUA6 226 aa21.04■□□□□ 0.96
CCDC7-203ENST00000362006 NYAP2Q9P242 653 aa21.04■□□□□ 0.96
CCDC7-203ENST00000362006 KIF5BP33176 963 aa21.03■□□□□ 0.96
CCDC7-203ENST00000362006 SULF1Q8IWU6 871 aa21.03■□□□□ 0.96
CCDC7-203ENST00000362006 TAF1DQ9H5J8 278 aaPredicted RBP21.03■□□□□ 0.96
CCDC7-203ENST00000362006 POLR2AP24928 1970 aaKnown RBP21.03■□□□□ 0.96
CCDC7-203ENST00000362006 SLURP2P0DP57 97 aa21.02■□□□□ 0.96
CCDC7-203ENST00000362006 MIGA2Q7L4E1 593 aa21.02■□□□□ 0.96
CCDC7-203ENST00000362006 RAB11FIP4Q86YS3 637 aa21.02■□□□□ 0.96
CCDC7-203ENST00000362006 CDAN1Q8IWY9 1227 aa21.02■□□□□ 0.96
CCDC7-203ENST00000362006 CTDNEP1O95476 244 aa21.02■□□□□ 0.96
CCDC7-203ENST00000362006 RXRAP19793 462 aa21.02■□□□□ 0.96
CCDC7-203ENST00000362006 CDC27P30260 824 aa21.02■□□□□ 0.96
CCDC7-203ENST00000362006 ADD1P35611 737 aaKnown RBP21.02■□□□□ 0.96
CCDC7-203ENST00000362006 MKL1Q969V6 931 aa21.02■□□□□ 0.96
CCDC7-203ENST00000362006 FAM217BQ9NTX9 383 aaPredicted RBP21.02■□□□□ 0.96
CCDC7-203ENST00000362006 SYNPO2Q9UMS6 1093 aa21.02■□□□□ 0.96
CCDC7-203ENST00000362006 PTPDC1A2A3K4 754 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 CAP2P40123 477 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 NBPF12Q5TAG4 269 aaPredicted RBP21.01■□□□□ 0.95
CCDC7-203ENST00000362006 CCDC144CPQ8IYA2 1237 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 FAM184AQ8NB25 1140 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 ZNF341Q9BYN7 854 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 CLIP2Q9UDT6 1046 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 SCAF8Q9UPN6 1271 aaKnown RBP21.01■□□□□ 0.95
CCDC7-203ENST00000362006 GDF11O95390 407 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 GH2P01242 217 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 IFNAR1P17181 557 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 GNAQP50148 359 aa21.01■□□□□ 0.95
CCDC7-203ENST00000362006 SEPT2Q15019 361 aa21■□□□□ 0.95
CCDC7-203ENST00000362006 MYH4Q9Y623 1939 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 PHF20L1A8MW92 1017 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 POTECB2RU33 542 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 JAK2O60674 1132 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 ASNSP08243 561 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 ICA1Q05084 483 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 GRM4Q14833 912 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 NTRK3Q16288 839 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 CTNND1O60716 968 aaKnown RBP20.99■□□□□ 0.95
CCDC7-203ENST00000362006 GUCY1A2P33402 732 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 RRP1BQ14684 758 aaKnown RBP20.99■□□□□ 0.95
CCDC7-203ENST00000362006 LZTS2Q9BRK4 669 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 ZBTB21Q9ULJ3 1066 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 STK36Q9NRP7 1315 aa20.99■□□□□ 0.95
CCDC7-203ENST00000362006 SSRP1Q08945 709 aaKnown RBP20.98■□□□□ 0.95
CCDC7-203ENST00000362006 RAB3GAP1Q15042 981 aa20.98■□□□□ 0.95
CCDC7-203ENST00000362006 LARP1BQ659C4 914 aaKnown RBP20.98■□□□□ 0.95
CCDC7-203ENST00000362006 TRIM22Q8IYM9 498 aa20.98■□□□□ 0.95
CCDC7-203ENST00000362006 RGS22Q8NE09 1264 aa20.98■□□□□ 0.95
CCDC7-203ENST00000362006 EEF2P13639 858 aaKnown RBP20.98■□□□□ 0.95
CCDC7-203ENST00000362006 KRT26Q7Z3Y9 468 aa20.98■□□□□ 0.95
CCDC7-203ENST00000362006 DDX11Q96FC9 970 aa20.98■□□□□ 0.95
CCDC7-203ENST00000362006 ARHGEF10LQ9HCE6 1279 aa20.98■□□□□ 0.95
CCDC7-203ENST00000362006 ORC3Q9UBD5 711 aaPredicted RBP20.98■□□□□ 0.95
CCDC7-203ENST00000362006 ZNF112Q9UJU3 913 aa20.98■□□□□ 0.95
CCDC7-203ENST00000362006 VEGFAP15692 232 aaPredicted RBP20.97■□□□□ 0.95
CCDC7-203ENST00000362006 SYT1P21579 422 aa20.97■□□□□ 0.95
CCDC7-203ENST00000362006 ATP2B2Q01814 1243 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms