RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 RTN1Q16799 776 aa19.4■□□□□ 0.7
SDCBP2-202ENST00000360779 TATDN1Q6P1N9 297 aa19.4■□□□□ 0.7
SDCBP2-202ENST00000360779 USP50Q70EL3 339 aaPredicted RBP19.4■□□□□ 0.7
SDCBP2-202ENST00000360779 FAM184AQ8NB25 1140 aa19.4■□□□□ 0.7
SDCBP2-202ENST00000360779 CHMP5Q9NZZ3 219 aa19.4■□□□□ 0.7
SDCBP2-202ENST00000360779 SIPA1L1O43166 1804 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 PLIN4Q96Q06 1357 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 CDKL5O76039 1030 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 DDAH1O94760 285 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 RAB3GAP1Q15042 981 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 SULF1Q8IWU6 871 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 PNMA1Q8ND90 353 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 CTCFLQ8NI51 663 aaPredicted RBP19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 DDX11Q96FC9 970 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 HPS5Q9UPZ3 1129 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 PPP2R3BQ9Y5P8 575 aa19.39■□□□□ 0.69
SDCBP2-202ENST00000360779 PITPNM2Q9BZ72 1349 aa19.38■□□□□ 0.69
SDCBP2-202ENST00000360779 CCDC196A0A1B0GTZ2 297 aa19.38■□□□□ 0.69
SDCBP2-202ENST00000360779 DCAF15Q66K64 600 aa19.38■□□□□ 0.69
SDCBP2-202ENST00000360779 TMEM179Q6ZVK1 233 aa19.38■□□□□ 0.69
SDCBP2-202ENST00000360779 METTL16Q86W50 562 aaKnown RBP19.38■□□□□ 0.69
SDCBP2-202ENST00000360779 TMEM47Q9BQJ4 181 aa19.38■□□□□ 0.69
SDCBP2-202ENST00000360779 LLPHQ9BRT6 129 aaKnown RBP19.38■□□□□ 0.69
SDCBP2-202ENST00000360779 CLIP2Q9UDT6 1046 aa19.38■□□□□ 0.69
SDCBP2-202ENST00000360779 CLEC11AQ9Y240 323 aa19.38■□□□□ 0.69
SDCBP2-202ENST00000360779 PTPDC1A2A3K4 754 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 RAD21O60216 631 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 TBC1D12O60347 775 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 TTLL1O95922 423 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 TOP1P11387 765 aaKnown RBP19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 NBPF12Q5TAG4 269 aaPredicted RBP19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 PRAMEF18Q5VWM3 479 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 RCSD1Q6JBY9 416 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 CLEC10AQ8IUN9 316 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 TEPSINQ96N21 525 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 MTMR4Q9NYA4 1195 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 CIZ1Q9ULV3 898 aaPredicted RBP19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 KIF3AQ9Y496 699 aa19.37■□□□□ 0.69
SDCBP2-202ENST00000360779 JAK2O60674 1132 aa19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 PPFIA3O75145 1194 aa19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 GH2P01242 217 aa19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 ADD1P35611 737 aaKnown RBP19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 RCAN1P53805 252 aa19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 HMGN5P82970 282 aaKnown RBP19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 ICA1Q05084 483 aa19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 SEPT2Q15019 361 aa19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 FANCBQ8NB91 859 aa19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 ANKS1AQ92625 1134 aa19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 RBM28Q9NW13 759 aaKnown RBP19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 ISY1Q9ULR0 285 aaKnown RBP19.36■□□□□ 0.69
SDCBP2-202ENST00000360779 KIF5BP33176 963 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 LRRC47Q8N1G4 583 aaKnown RBP19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 NSUN7Q8NE18 718 aaKnown RBP19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 KANSL2Q9H9L4 492 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 IGKV6D-41A0A0C4DH26 115 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 CDC27P30260 824 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 FOSBP53539 338 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 NUCB2P80303 420 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 SHROOM1Q2M3G4 852 aaPredicted RBP19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 SUPT20HL1Q3ZLR7 823 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 KRT26Q7Z3Y9 468 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 PNMA8AQ86V59 439 aaPredicted RBP19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 ZNF341Q9BYN7 854 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 PGAP2Q9UHJ9 254 aa19.35■□□□□ 0.69
SDCBP2-202ENST00000360779 ADM5C9JUS6 153 aa19.34■□□□□ 0.69
SDCBP2-202ENST00000360779 AKAP17AQ02040 695 aaKnown RBP19.34■□□□□ 0.69
SDCBP2-202ENST00000360779 PPP2R5BQ15173 497 aa19.34■□□□□ 0.69
SDCBP2-202ENST00000360779 CCDC82Q8N4S0 544 aa19.34■□□□□ 0.69
SDCBP2-202ENST00000360779 CTDNEP1O95476 244 aa19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 EEF2P13639 858 aaKnown RBP19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 PDCP20941 246 aa19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 SSRP1Q08945 709 aaKnown RBP19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 TROAPQ12815 778 aa19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 RRP1BQ14684 758 aaKnown RBP19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 FOXD4L5Q5VV16 416 aaPredicted RBP19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 LARP1BQ659C4 914 aaKnown RBP19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 TRIM22Q8IYM9 498 aa19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 ZC3H15Q8WU90 426 aaKnown RBP19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 FOXD4L4Q8WXT5 416 aaPredicted RBP19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 SLC26A6Q9BXS9 759 aa19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 ARHGEF10LQ9HCE6 1279 aa19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 ORC3Q9UBD5 711 aaPredicted RBP19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 ZBTB21Q9ULJ3 1066 aa19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 NID2Q14112 1375 aa19.33■□□□□ 0.68
SDCBP2-202ENST00000360779 VPS37CA5D8V6 355 aaPredicted RBP19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 NF2P35240 595 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 CAP2P40123 477 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 PRKG1Q13976 671 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 SMARCC2Q8TAQ2 1214 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 ZNF526Q8TF50 670 aaPredicted RBP19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 PHKBQ93100 1093 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 RRAGCQ9HB90 399 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 NYAP2Q9P242 653 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 SRCAPQ6ZRS2 3230 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 WDR90Q96KV7 1748 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 SCN4AP35499 1836 aa19.32■□□□□ 0.68
SDCBP2-202ENST00000360779 H3BQV1 296 aa19.31■□□□□ 0.68
SDCBP2-202ENST00000360779 PARP1P09874 1014 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms