RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 KRT26Q7Z3Y9 468 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 ZNF654Q8IZM8 581 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 CEP95Q96GE4 821 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 HPS5Q9UPZ3 1129 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 PPP2R3BQ9Y5P8 575 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 GREB1LQ9C091 1923 aaPredicted RBP25.6■■□□□ 1.69
HOXA4-201ENST00000360046 ADM5C9JUS6 153 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 TBC1D12O60347 775 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 METAP2P50579 478 aaKnown RBP eCLIP25.6■■□□□ 1.69
HOXA4-201ENST00000360046 CATIPQ7Z7H3 387 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.6■■□□□ 1.69
HOXA4-201ENST00000360046 KAT14Q9H8E8 782 aa25.6■■□□□ 1.69
HOXA4-201ENST00000360046 POTEIP0CG38 1075 aa25.59■■□□□ 1.69
HOXA4-201ENST00000360046 POTEJP0CG39 1038 aa25.59■■□□□ 1.69
HOXA4-201ENST00000360046 ABCB5Q2M3G0 1257 aa25.59■■□□□ 1.69
HOXA4-201ENST00000360046 USP48Q86UV5 1035 aa25.59■■□□□ 1.69
HOXA4-201ENST00000360046 CCDC144CPQ8IYA2 1237 aa25.59■■□□□ 1.69
HOXA4-201ENST00000360046 GOLGA8AA7E2F4 631 aa25.58■■□□□ 1.69
HOXA4-201ENST00000360046 YY1P25490 414 aa25.58■■□□□ 1.69
HOXA4-201ENST00000360046 DLK2Q6UY11 383 aa25.58■■□□□ 1.69
HOXA4-201ENST00000360046 NUP133Q8WUM0 1156 aa25.58■■□□□ 1.69
HOXA4-201ENST00000360046 SHROOM1Q2M3G4 852 aaPredicted RBP25.57■■□□□ 1.68
HOXA4-201ENST00000360046 CLEC10AQ8IUN9 316 aa25.57■■□□□ 1.68
HOXA4-201ENST00000360046 ANKS1AQ92625 1134 aa25.57■■□□□ 1.68
HOXA4-201ENST00000360046 MTMR4Q9NYA4 1195 aa25.57■■□□□ 1.68
HOXA4-201ENST00000360046 SMC3Q9UQE7 1217 aa25.57■■□□□ 1.68
HOXA4-201ENST00000360046 IGKV6D-41A0A0C4DH26 115 aa25.57■■□□□ 1.68
HOXA4-201ENST00000360046 DTNBO60941 627 aa25.57■■□□□ 1.68
HOXA4-201ENST00000360046 HOOK2Q96ED9 719 aa25.57■■□□□ 1.68
HOXA4-201ENST00000360046 CABP5Q9NP86 173 aa25.57■■□□□ 1.68
HOXA4-201ENST00000360046 DHX16O60231 1041 aaKnown RBP25.56■■□□□ 1.68
HOXA4-201ENST00000360046 RRP1BQ14684 758 aaKnown RBP25.56■■□□□ 1.68
HOXA4-201ENST00000360046 SUPT20HL1Q3ZLR7 823 aa25.56■■□□□ 1.68
HOXA4-201ENST00000360046 TMEM179Q6ZVK1 233 aa25.56■■□□□ 1.68
HOXA4-201ENST00000360046 PNMA1Q8ND90 353 aa25.56■■□□□ 1.68
HOXA4-201ENST00000360046 CHMP4CQ96CF2 233 aa25.56■■□□□ 1.68
HOXA4-201ENST00000360046 TMEM47Q9BQJ4 181 aa25.56■■□□□ 1.68
HOXA4-201ENST00000360046 CPLX1O14810 134 aa25.55■■□□□ 1.68
HOXA4-201ENST00000360046 GH2P01242 217 aa25.55■■□□□ 1.68
HOXA4-201ENST00000360046 MAP3K10Q02779 954 aa25.55■■□□□ 1.68
HOXA4-201ENST00000360046 DCAF15Q66K64 600 aa25.55■■□□□ 1.68
HOXA4-201ENST00000360046 GLIS2Q9BZE0 524 aaPredicted RBP25.55■■□□□ 1.68
HOXA4-201ENST00000360046 CWC22Q9HCG8 908 aaKnown RBP25.55■■□□□ 1.68
HOXA4-201ENST00000360046 MYH4Q9Y623 1939 aa25.55■■□□□ 1.68
HOXA4-201ENST00000360046 DDAH1O94760 285 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 TTLL1O95922 423 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 RCAN1P53805 252 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 ATP2B2Q01814 1243 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 RAB3GAP1Q15042 981 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 MAP1SQ66K74 1059 aaPredicted RBP25.54■■□□□ 1.68
HOXA4-201ENST00000360046 CDC37L1Q7L3B6 337 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 CALM1P0DP23 149 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 CALM2P0DP24 149 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 CALM3P0DP25 149 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 TOP1P11387 765 aaKnown RBP25.54■■□□□ 1.68
HOXA4-201ENST00000360046 SEPT2Q15019 361 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 RTN1Q16799 776 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 PPP4R3BQ5MIZ7 849 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 CLIP2Q9UDT6 1046 aa25.54■■□□□ 1.68
HOXA4-201ENST00000360046 NID2Q14112 1375 aa25.53■■□□□ 1.68
HOXA4-201ENST00000360046 TROAPQ12815 778 aa25.53■■□□□ 1.68
HOXA4-201ENST00000360046 PRKG1Q13976 671 aa25.53■■□□□ 1.68
HOXA4-201ENST00000360046 FANCBQ8NB91 859 aa25.53■■□□□ 1.68
HOXA4-201ENST00000360046 LLPHQ9BRT6 129 aaKnown RBP25.53■■□□□ 1.68
HOXA4-201ENST00000360046 KANSL2Q9H9L4 492 aa25.53■■□□□ 1.68
HOXA4-201ENST00000360046 MTMR7Q9Y216 660 aa25.53■■□□□ 1.68
HOXA4-201ENST00000360046 ATAD5Q96QE3 1844 aa25.52■■□□□ 1.68
HOXA4-201ENST00000360046 GJB2P29033 226 aa25.52■■□□□ 1.68
HOXA4-201ENST00000360046 CDC27P30260 824 aa25.52■■□□□ 1.68
HOXA4-201ENST00000360046 ADD1P35611 737 aaKnown RBP25.52■■□□□ 1.68
HOXA4-201ENST00000360046 NOVP48745 357 aa25.52■■□□□ 1.68
HOXA4-201ENST00000360046 JAG1P78504 1218 aa25.52■■□□□ 1.68
HOXA4-201ENST00000360046 ICA1Q05084 483 aa25.52■■□□□ 1.68
HOXA4-201ENST00000360046 JAK2O60674 1132 aa25.51■■□□□ 1.68
HOXA4-201ENST00000360046 GUCY1A2P33402 732 aa25.51■■□□□ 1.68
HOXA4-201ENST00000360046 CAP2P40123 477 aa25.51■■□□□ 1.68
HOXA4-201ENST00000360046 CPLX2Q6PUV4 134 aaKnown RBP25.51■■□□□ 1.68
HOXA4-201ENST00000360046 LDHDQ86WU2 507 aa25.51■■□□□ 1.68
HOXA4-201ENST00000360046 LRRC47Q8N1G4 583 aaKnown RBP25.51■■□□□ 1.68
HOXA4-201ENST00000360046 NSUN7Q8NE18 718 aaKnown RBP25.51■■□□□ 1.68
HOXA4-201ENST00000360046 CDCA5Q96FF9 252 aa25.51■■□□□ 1.68
HOXA4-201ENST00000360046 ZNF341Q9BYN7 854 aa25.51■■□□□ 1.68
HOXA4-201ENST00000360046 ZBTB21Q9ULJ3 1066 aa25.51■■□□□ 1.68
HOXA4-201ENST00000360046 FZD1Q9UP38 647 aa25.51■■□□□ 1.68
HOXA4-201ENST00000360046 CCDC196A0A1B0GTZ2 297 aa25.51■■□□□ 1.67
HOXA4-201ENST00000360046 PTPDC1A2A3K4 754 aa25.51■■□□□ 1.67
HOXA4-201ENST00000360046 PHF20L1A8MW92 1017 aa25.51■■□□□ 1.67
HOXA4-201ENST00000360046 CTDNEP1O95476 244 aa25.51■■□□□ 1.67
HOXA4-201ENST00000360046 CTCFLQ8NI51 663 aaPredicted RBP25.51■■□□□ 1.67
HOXA4-201ENST00000360046 DDX11Q96FC9 970 aa25.51■■□□□ 1.67
HOXA4-201ENST00000360046 GPBP1L1Q9HC44 474 aaPredicted RBP25.51■■□□□ 1.67
HOXA4-201ENST00000360046 SSC5DA1L4H1 1573 aa25.5■■□□□ 1.67
HOXA4-201ENST00000360046 PPFIA3O75145 1194 aa25.5■■□□□ 1.67
HOXA4-201ENST00000360046 DDIT3P35638 169 aa25.5■■□□□ 1.67
HOXA4-201ENST00000360046 FAM217BQ9NTX9 383 aaPredicted RBP25.5■■□□□ 1.67
HOXA4-201ENST00000360046 CDKL5O76039 1030 aa25.49■■□□□ 1.67
HOXA4-201ENST00000360046 EEF2P13639 858 aaKnown RBP25.49■■□□□ 1.67
HOXA4-201ENST00000360046 NF2P35240 595 aa25.49■■□□□ 1.67
HOXA4-201ENST00000360046 PPP2R5BQ15173 497 aa25.49■■□□□ 1.67
HOXA4-201ENST00000360046 RBM28Q9NW13 759 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms