RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 AKAP17AQ02040 695 aaKnown RBP20.17■□□□□ 0.82
GYPC-202ENST00000356887 GABPB1Q06547 395 aaPredicted RBP20.17■□□□□ 0.82
GYPC-202ENST00000356887 SPECC1LQ69YQ0 1117 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 TRMT44Q8IYL2 757 aaKnown RBP20.17■□□□□ 0.82
GYPC-202ENST00000356887 KRT222Q8N1A0 295 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 TC2NQ8N9U0 490 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 RIOK1Q9BRS2 568 aaKnown RBP20.17■□□□□ 0.82
GYPC-202ENST00000356887 PHF20Q9BVI0 1012 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 LAMB2P55268 1798 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 A0A0G2JS52 829 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 FAM205CA6NFA0 338 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 PRPF3O43395 683 aaKnown RBP20.17■□□□□ 0.82
GYPC-202ENST00000356887 STX10O60499 249 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 XBP1P17861 261 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 ENAHQ8N8S7 591 aaPredicted RBP20.17■□□□□ 0.82
GYPC-202ENST00000356887 ZSCAN10Q96SZ4 725 aaPredicted RBP20.17■□□□□ 0.82
GYPC-202ENST00000356887 CDC5LQ99459 802 aaKnown RBP20.17■□□□□ 0.82
GYPC-202ENST00000356887 ZNF446Q9NWS9 450 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 RAI14Q9P0K7 980 aa20.17■□□□□ 0.82
GYPC-202ENST00000356887 NR1I3Q14994 352 aa20.16■□□□□ 0.82
GYPC-202ENST00000356887 CT47A1Q5JQC4 288 aaPredicted RBP20.16■□□□□ 0.82
GYPC-202ENST00000356887 SRRTQ9BXP5 876 aaKnown RBP20.16■□□□□ 0.82
GYPC-202ENST00000356887 SAMSN1Q9NSI8 373 aaKnown RBP20.16■□□□□ 0.82
GYPC-202ENST00000356887 VPS54Q9P1Q0 977 aa20.16■□□□□ 0.82
GYPC-202ENST00000356887 ABCF2Q9UG63 623 aa20.16■□□□□ 0.82
GYPC-202ENST00000356887 RREB1Q92766 1687 aa20.16■□□□□ 0.82
GYPC-202ENST00000356887 KRT2P35908 639 aa20.15■□□□□ 0.82
GYPC-202ENST00000356887 EARS2Q5JPH6 523 aaKnown RBP20.15■□□□□ 0.82
GYPC-202ENST00000356887 GJD4Q96KN9 370 aaPredicted RBP20.15■□□□□ 0.82
GYPC-202ENST00000356887 COL4A1P02462 1669 aa20.15■□□□□ 0.82
GYPC-202ENST00000356887 A0A087X0B3 334 aa20.15■□□□□ 0.82
GYPC-202ENST00000356887 GYG1P46976 350 aa20.15■□□□□ 0.82
GYPC-202ENST00000356887 ITPK1Q13572 414 aa20.15■□□□□ 0.82
GYPC-202ENST00000356887 SH3RF1Q7Z6J0 888 aa20.15■□□□□ 0.82
GYPC-202ENST00000356887 GNL3LQ9NVN8 582 aaKnown RBP20.15■□□□□ 0.82
GYPC-202ENST00000356887 ZHX1Q9UKY1 873 aaPredicted RBP20.15■□□□□ 0.82
GYPC-202ENST00000356887 GOLGA6L9A6NEM1 432 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 FGRP09769 529 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 ADKP55263 362 aaKnown RBP20.14■□□□□ 0.81
GYPC-202ENST00000356887 CATIPQ7Z7H3 387 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 DHX58Q96C10 678 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 BRIP1Q9BX63 1249 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 PARP3Q9Y6F1 533 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 V9GY48 417 aaPredicted RBP20.14■□□□□ 0.81
GYPC-202ENST00000356887 CICQ96RK0 1608 aaPredicted RBP20.14■□□□□ 0.81
GYPC-202ENST00000356887 LOC102724428A0A0B4J2F2 783 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 A0A1B0GTH6 734 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 URI1O94763 535 aaPredicted RBP20.14■□□□□ 0.81
GYPC-202ENST00000356887 SLFN14P0C7P3 912 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 SIK1P57059 783 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 ACSBG1Q96GR2 724 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 PAGE5Q96GU1 130 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 EPSTI1Q96J88 318 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 RBM28Q9NW13 759 aaKnown RBP20.14■□□□□ 0.81
GYPC-202ENST00000356887 TRPC5Q9UL62 973 aaPredicted RBP20.14■□□□□ 0.81
GYPC-202ENST00000356887 COL1A1P02452 1464 aaPredicted RBP20.14■□□□□ 0.81
GYPC-202ENST00000356887 DUOX1Q9NRD9 1551 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 CACNA1SQ13698 1873 aa20.14■□□□□ 0.81
GYPC-202ENST00000356887 PRDM1O75626 825 aa20.13■□□□□ 0.81
GYPC-202ENST00000356887 PLEKHA8P1O95397 391 aa20.13■□□□□ 0.81
GYPC-202ENST00000356887 DYNLL1P63167 89 aaKnown RBP20.13■□□□□ 0.81
GYPC-202ENST00000356887 UBE4AQ14139 1066 aa20.13■□□□□ 0.81
GYPC-202ENST00000356887 ARHGAP29Q52LW3 1261 aa20.13■□□□□ 0.81
GYPC-202ENST00000356887 IFIT1BQ5T764 474 aaKnown RBP20.13■□□□□ 0.81
GYPC-202ENST00000356887 FERMT2Q96AC1 680 aa20.13■□□□□ 0.81
GYPC-202ENST00000356887 CCDC34Q96HJ3 373 aa20.13■□□□□ 0.81
GYPC-202ENST00000356887 MYH2Q9UKX2 1941 aa20.13■□□□□ 0.81
GYPC-202ENST00000356887 CYP2D7A0A087X1C5 515 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 hCG_1642624A0A1W2PR95 340 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 WTIPA6NIX2 430 aaPredicted RBP20.12■□□□□ 0.81
GYPC-202ENST00000356887 BMP15O95972 392 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 TROAPQ12815 778 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 SPATA1Q5VX52 437 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 TOGARAM2Q6ZUX3 1019 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 APTXQ7Z2E3 356 aaKnown RBP20.12■□□□□ 0.81
GYPC-202ENST00000356887 TNFRSF25Q93038 417 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 MYH14Q7Z406 1995 aaKnown RBP20.12■□□□□ 0.81
GYPC-202ENST00000356887 TADA3O75528 432 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 CALM1P0DP23 149 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 CALM2P0DP24 149 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 CALM3P0DP25 149 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 CLCN6P51797 869 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 CUL4BQ13620 913 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 UBXN4Q92575 508 aa20.12■□□□□ 0.81
GYPC-202ENST00000356887 WNT7AO00755 349 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 IGSF3O75054 1194 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 PCP11498 1178 aaKnown RBP20.11■□□□□ 0.81
GYPC-202ENST00000356887 CD44P16070 742 aaKnown RBP20.11■□□□□ 0.81
GYPC-202ENST00000356887 AFMP43652 599 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 BMS1Q14692 1282 aaKnown RBP20.11■□□□□ 0.81
GYPC-202ENST00000356887 NPY5RQ15761 445 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 ANKRD18AQ8IVF6 992 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 ZNF384Q8TF68 577 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 SYMPKQ92797 1274 aaKnown RBP20.11■□□□□ 0.81
GYPC-202ENST00000356887 DPYDQ12882 1025 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 TMTC3Q6ZXV5 915 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 IQCA1Q86XH1 822 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 MNS1Q8NEH6 495 aa20.11■□□□□ 0.81
GYPC-202ENST00000356887 CARD6Q9BX69 1037 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms