RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 ARID3AQ99856 593 aa27.19■■□□□ 1.94
USP25-203ENST00000351097 OSBPL5Q9H0X9 879 aaPredicted RBP27.19■■□□□ 1.94
USP25-203ENST00000351097 UBE2Q2LH0YL09 131 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 FMNL1O95466 1100 aaPredicted RBP27.18■■□□□ 1.94
USP25-203ENST00000351097 ALDH1B1P30837 517 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 TRIM29Q14134 588 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 MFSD14BQ5SR56 506 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 FANCBQ8NB91 859 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 SLC26A6Q9BXS9 759 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 BIN1O00499 593 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 SYKP43405 635 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 USP5P45974 858 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 SSRP1Q08945 709 aaKnown RBP27.18■■□□□ 1.94
USP25-203ENST00000351097 IQCA1Q86XH1 822 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 HPSEQ9Y251 543 aa27.18■■□□□ 1.94
USP25-203ENST00000351097 COL11A2P13942 1736 aaPredicted RBP27.18■■□□□ 1.94
USP25-203ENST00000351097 MYH2Q9UKX2 1941 aa27.17■■□□□ 1.94
USP25-203ENST00000351097 U2AF2P26368 475 aaKnown RBP eCLIP27.17■■□□□ 1.942e-6■■■■□ 21.4
USP25-203ENST00000351097 PTPAQ15257 358 aa27.17■■□□□ 1.94
USP25-203ENST00000351097 NUP133Q8WUM0 1156 aa27.17■■□□□ 1.94
USP25-203ENST00000351097 MASTLQ96GX5 879 aa27.17■■□□□ 1.94
USP25-203ENST00000351097 CEP135Q66GS9 1140 aa27.16■■□□□ 1.94
USP25-203ENST00000351097 FAM205AQ6ZU69 1335 aa27.16■■□□□ 1.94
USP25-203ENST00000351097 CCDC196A0A1B0GTZ2 297 aa27.16■■□□□ 1.94
USP25-203ENST00000351097 RIMBP2O15034 1052 aa27.16■■□□□ 1.94
USP25-203ENST00000351097 IFIT1BQ5T764 474 aaKnown RBP27.16■■□□□ 1.94
USP25-203ENST00000351097 C12orf60Q5U649 245 aa27.16■■□□□ 1.94
USP25-203ENST00000351097 TBC1D22AQ8WUA7 517 aa27.16■■□□□ 1.94
USP25-203ENST00000351097 MAP3K14Q99558 947 aa27.16■■□□□ 1.94
USP25-203ENST00000351097 NOL10Q9BSC4 688 aaKnown RBP27.16■■□□□ 1.94
USP25-203ENST00000351097 FAM237AA0A1B0GTK4 181 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 PDE4BQ07343 736 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 SYCP1Q15431 976 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 SLC4A8Q2Y0W8 1093 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 COA1Q9GZY4 146 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 KCND1Q9NSA2 647 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 ECM29Q5VYK3 1845 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 SMC2O95347 1197 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 BTDP43251 543 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 SHC4Q6S5L8 630 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 CCDC112Q8NEF3 446 aa27.15■■□□□ 1.94
USP25-203ENST00000351097 XPO4Q9C0E2 1151 aaKnown RBP27.15■■□□□ 1.94
USP25-203ENST00000351097 GPR75-ASB3A0A0A6YYF3 556 aa27.14■■□□□ 1.94
USP25-203ENST00000351097 USP27XA6NNY8 438 aa27.14■■□□□ 1.94
USP25-203ENST00000351097 NCAPHQ15003 741 aa27.14■■□□□ 1.94
USP25-203ENST00000351097 EZH2Q15910 746 aaKnown RBP27.14■■□□□ 1.94
USP25-203ENST00000351097 FAM47AQ5JRC9 791 aa27.14■■□□□ 1.94
USP25-203ENST00000351097 CMTR1Q8N1G2 835 aaKnown RBP27.14■■□□□ 1.94
USP25-203ENST00000351097 PDCL2Q8N4E4 241 aa27.14■■□□□ 1.94
USP25-203ENST00000351097 CRACR2BQ8N4Y2 399 aaPredicted RBP27.14■■□□□ 1.94
USP25-203ENST00000351097 TGFBRAP1Q8WUH2 860 aa27.14■■□□□ 1.94
USP25-203ENST00000351097 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.14■■□□□ 1.94
USP25-203ENST00000351097 IFNKQ9P0W0 207 aa27.14■■□□□ 1.94
USP25-203ENST00000351097 TUBE1Q9UJT0 475 aa27.14■■□□□ 1.94
USP25-203ENST00000351097 IKBKBO14920 756 aa27.14■■□□□ 1.93
USP25-203ENST00000351097 GUCY1A2P33402 732 aa27.14■■□□□ 1.93
USP25-203ENST00000351097 RESP18Q5W5W9 173 aa27.14■■□□□ 1.93
USP25-203ENST00000351097 NYAP1Q6ZVC0 841 aa27.14■■□□□ 1.93
USP25-203ENST00000351097 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.14■■□□□ 1.93
USP25-203ENST00000351097 GTF2IP78347 998 aa27.13■■□□□ 1.93
USP25-203ENST00000351097 PTPN14Q15678 1187 aa27.13■■□□□ 1.93
USP25-203ENST00000351097 DPP8Q6V1X1 898 aaPredicted RBP27.13■■□□□ 1.93
USP25-203ENST00000351097 CERS3Q8IU89 383 aa27.13■■□□□ 1.93
USP25-203ENST00000351097 CCDC150Q8NCX0 1101 aa27.13■■□□□ 1.93
USP25-203ENST00000351097 FAM163AQ96GL9 167 aaPredicted RBP27.13■■□□□ 1.93
USP25-203ENST00000351097 CAMKK2Q96RR4 588 aa27.13■■□□□ 1.93
USP25-203ENST00000351097 NMT2O60551 498 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 PPP2R5BQ15173 497 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 SLC15A2Q16348 729 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 TRIM22Q8IYM9 498 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 CCDC82Q8N4S0 544 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 WASF1Q92558 559 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 ZC3H12CQ9C0D7 883 aaKnown RBP27.12■■□□□ 1.93
USP25-203ENST00000351097 TAOK2Q9UL54 1235 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 ROBO3Q96MS0 1386 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 CUTAO60888 179 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 EN1Q05925 392 aaPredicted RBP27.12■■□□□ 1.93
USP25-203ENST00000351097 TROAPQ12815 778 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 DHX8Q14562 1220 aaKnown RBP27.12■■□□□ 1.93
USP25-203ENST00000351097 CATIPQ7Z7H3 387 aa27.12■■□□□ 1.93
USP25-203ENST00000351097 CCAR2Q8N163 923 aaKnown RBP27.12■■□□□ 1.93
USP25-203ENST00000351097 DLEC1Q9Y238 1755 aa27.11■■□□□ 1.93
USP25-203ENST00000351097 GAKO14976 1311 aa27.11■■□□□ 1.93
USP25-203ENST00000351097 NCBP1Q09161 790 aaKnown RBP27.11■■□□□ 1.93
USP25-203ENST00000351097 MAPKAPK5Q8IW41 473 aa27.11■■□□□ 1.93
USP25-203ENST00000351097 ZNF622Q969S3 477 aaKnown RBP eCLIP27.11■■□□□ 1.933e-6■■□□□ 13.4
USP25-203ENST00000351097 PPP4R3BQ5MIZ7 849 aa27.1■■□□□ 1.93
USP25-203ENST00000351097 TMC6Q7Z403 805 aa27.1■■□□□ 1.93
USP25-203ENST00000351097 ZNF592Q92610 1267 aa27.1■■□□□ 1.93
USP25-203ENST00000351097 DYNLL2Q96FJ2 89 aa27.1■■□□□ 1.93
USP25-203ENST00000351097 TSPY2A6NKD2 308 aa27.09■■□□□ 1.93
USP25-203ENST00000351097 DEXIO95424 95 aa27.09■■□□□ 1.93
USP25-203ENST00000351097 C2CD5Q86YS7 1000 aa27.09■■□□□ 1.93
USP25-203ENST00000351097 SLF2Q8IX21 1173 aa27.09■■□□□ 1.93
USP25-203ENST00000351097 RHBDL3P58872 404 aa27.09■■□□□ 1.93
USP25-203ENST00000351097 CLIC6Q96NY7 704 aa27.09■■□□□ 1.93
USP25-203ENST00000351097 DDAH1O94760 285 aa27.08■■□□□ 1.93
USP25-203ENST00000351097 NOSTRINQ8IVI9 506 aa27.08■■□□□ 1.93
USP25-203ENST00000351097 AMOTL1Q8IY63 956 aa27.08■■□□□ 1.93
USP25-203ENST00000351097 CALM1P0DP23 149 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms