RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 LRRD1A4D1F6 860 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 TRAF1Q13077 416 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 RRAGAQ7L523 313 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 TADA2BQ86TJ2 420 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.05■□□□□ 0.81e-8■■■■■ 54.3
SMC4-201ENST00000344722 KIF21AQ7Z4S6 1674 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 CETN3O15182 167 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 ZNF853P0CG23 659 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 PPARDQ03181 441 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 TRIM68Q6AZZ1 485 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 TTC19Q6DKK2 380 aaPredicted RBP20.05■□□□□ 0.8
SMC4-201ENST00000344722 ZNF365Q70YC5 407 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 ARMC9Q7Z3E5 817 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 SAMM50Q9Y512 469 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 V9GY48 417 aaPredicted RBP20.05■□□□□ 0.8
SMC4-201ENST00000344722 A0A0D9SFI3 127 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 H7C1D1 291 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 BLZF1Q9H2G9 400 aa20.05■□□□□ 0.8
SMC4-201ENST00000344722 MAP7D1Q3KQU3 841 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 EDC4Q6P2E9 1401 aaKnown RBP20.04■□□□□ 0.8
SMC4-201ENST00000344722 ERCC5P28715 1186 aaPredicted RBP20.04■□□□□ 0.8
SMC4-201ENST00000344722 STX2P32856 288 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 TNNI2P48788 182 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 TIMM10P62072 90 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 MAP7Q14244 749 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 LETM2Q2VYF4 491 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 CFAP157Q5JU67 520 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 PHLDB3Q6NSJ2 640 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 NOSTRINQ8IVI9 506 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 METTL22Q9BUU2 404 aaPredicted RBP20.04■□□□□ 0.8
SMC4-201ENST00000344722 SYNCQ9H7C4 482 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 APBB1IPQ7Z5R6 666 aaPredicted RBP20.04■□□□□ 0.8
SMC4-201ENST00000344722 VSTM4Q8IW00 320 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 MAP4K1Q92918 833 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 SUCLG2Q96I99 432 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 RCOR1Q9UKL0 485 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 CLIC4Q9Y696 253 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 HLA-DOAP06340 250 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 IRX5P78411 483 aaPredicted RBP20.04■□□□□ 0.8
SMC4-201ENST00000344722 RNF168Q8IYW5 571 aaPredicted RBP20.04■□□□□ 0.8
SMC4-201ENST00000344722 MIGA1Q8NAN2 632 aa20.04■□□□□ 0.8
SMC4-201ENST00000344722 CCDC197Q8NCU1 140 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 CASP14P31944 242 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 ZNF526Q8TF50 670 aaPredicted RBP20.03■□□□□ 0.8
SMC4-201ENST00000344722 ADCY9O60503 1353 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 RAB3IL1Q8TBN0 382 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 ASIC3Q9UHC3 531 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 KCNJ14Q9UNX9 436 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 FRMD4BQ9Y2L6 1034 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 FRMD3A2A2Y4 597 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 CALUO43852 315 aaPredicted RBP20.03■□□□□ 0.8
SMC4-201ENST00000344722 STAG1Q8WVM7 1258 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 POLR3EQ9NVU0 708 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 SCRN1Q12765 414 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 CC2D1AQ6P1N0 951 aaPredicted RBP20.03■□□□□ 0.8
SMC4-201ENST00000344722 TRIM4Q9C037 500 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 ABCB6Q9NP58 842 aa20.03■□□□□ 0.8
SMC4-201ENST00000344722 FAM207AQ9NSI2 230 aaPredicted RBP20.03■□□□□ 0.8
SMC4-201ENST00000344722 PPP6R2O75170 966 aa20.02■□□□□ 0.8
SMC4-201ENST00000344722 ADCK5Q3MIX3 580 aa20.02■□□□□ 0.8
SMC4-201ENST00000344722 EIF3CLB5ME19 914 aaKnown RBP20.02■□□□□ 0.8
SMC4-201ENST00000344722 KCTD16Q68DU8 428 aa20.02■□□□□ 0.8
SMC4-201ENST00000344722 PLEKHF1Q96S99 279 aa20.02■□□□□ 0.8
SMC4-201ENST00000344722 EIF3CQ99613 913 aaKnown RBP20.02■□□□□ 0.8
SMC4-201ENST00000344722 RNMTO43148 476 aaKnown RBP20.02■□□□□ 0.8
SMC4-201ENST00000344722 PLA2G4DQ86XP0 818 aa20.02■□□□□ 0.8
SMC4-201ENST00000344722 N4BP2L2Q92802 583 aaPredicted RBP20.02■□□□□ 0.8
SMC4-201ENST00000344722 USP44Q9H0E7 712 aa20.02■□□□□ 0.8
SMC4-201ENST00000344722 CASQ2O14958 399 aaPredicted RBP20.02■□□□□ 0.79
SMC4-201ENST00000344722 KLHDC4Q8TBB5 520 aa20.02■□□□□ 0.79
SMC4-201ENST00000344722 PLEKHA4Q9H4M7 779 aa20.02■□□□□ 0.79
SMC4-201ENST00000344722 ZPR1O75312 459 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 RPSAP08865 295 aaKnown RBP20.01■□□□□ 0.79
SMC4-201ENST00000344722 FAM114A2Q9NRY5 505 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 ZNF518AQ6AHZ1 1483 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 SF3A3Q12874 501 aaKnown RBP eCLIP20.01■□□□□ 0.793e-7■■■■■ 122.4
SMC4-201ENST00000344722 INF2Q27J81 1249 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 ALS2CLQ60I27 953 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 CCDC105Q8IYK2 499 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 CEP120Q8N960 986 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 AMFRQ9UKV5 643 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 POGZQ7Z3K3 1410 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 SLC39A14Q15043 492 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 ZNF827Q17R98 1081 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 KIFAP3Q92845 792 aa20.01■□□□□ 0.79
SMC4-201ENST00000344722 KRIT1O00522 736 aa20■□□□□ 0.79
SMC4-201ENST00000344722 KCNK3O14649 394 aa20■□□□□ 0.79
SMC4-201ENST00000344722 ZMYM6O95789 1325 aa20■□□□□ 0.79
SMC4-201ENST00000344722 COPB1P53618 953 aaKnown RBP20■□□□□ 0.79
SMC4-201ENST00000344722 RBL2Q08999 1139 aa20■□□□□ 0.79
SMC4-201ENST00000344722 ANKRD20A3Q5VUR7 823 aa20■□□□□ 0.79
SMC4-201ENST00000344722 MGARPQ8TDB4 240 aa20■□□□□ 0.79
SMC4-201ENST00000344722 SBNO1A3KN83 1393 aa20■□□□□ 0.79
SMC4-201ENST00000344722 CCDC169A6NNP5 214 aa20■□□□□ 0.79
SMC4-201ENST00000344722 NDC80O14777 642 aa20■□□□□ 0.79
SMC4-201ENST00000344722 GUCY2DQ02846 1103 aa20■□□□□ 0.79
SMC4-201ENST00000344722 GOLGA8FQ08AF8 430 aa20■□□□□ 0.79
SMC4-201ENST00000344722 GOLGA8DPQ0D2H9 430 aa20■□□□□ 0.79
SMC4-201ENST00000344722 STAMQ92783 540 aa20■□□□□ 0.79
SMC4-201ENST00000344722 PCDHA5Q9Y5H7 936 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms