RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 PHF20Q9BVI0 1012 aa14.61□□□□□ -0.07
RNF13-201ENST00000344229 TUBE1Q9UJT0 475 aa14.61□□□□□ -0.07
RNF13-201ENST00000344229 HSPA1LP34931 641 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 NCAPHQ15003 741 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 NOM1Q5C9Z4 860 aaKnown RBP14.6□□□□□ -0.07
RNF13-201ENST00000344229 SRBD1Q8N5C6 995 aaKnown RBP14.6□□□□□ -0.07
RNF13-201ENST00000344229 NAT10Q9H0A0 1025 aaKnown RBP14.6□□□□□ -0.07
RNF13-201ENST00000344229 MCM9Q9NXL9 1143 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 ARPP21Q9UBL0 812 aaPredicted RBP14.6□□□□□ -0.07
RNF13-201ENST00000344229 KCNH3Q9ULD8 1083 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 XDHP47989 1333 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 WNT7AO00755 349 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 ATP2B1P20020 1258 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 RILPL1Q5EBL4 403 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 RCSD1Q6JBY9 416 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 TMTC3Q6ZXV5 915 aa14.6□□□□□ -0.07
RNF13-201ENST00000344229 LDHBP07195 334 aaKnown RBP14.59□□□□□ -0.07
RNF13-201ENST00000344229 VEGFAP15692 232 aaPredicted RBP14.59□□□□□ -0.07
RNF13-201ENST00000344229 PTPREP23469 700 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 NPY5RQ15761 445 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 DYNLL2Q96FJ2 89 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 CNTNAP5Q8WYK1 1306 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 ADAMTS3O15072 1205 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 DDAH1O94760 285 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 CRY2Q49AN0 593 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 DNTTIP2Q5QJE6 756 aaKnown RBP14.59□□□□□ -0.07
RNF13-201ENST00000344229 SPTY2D1Q68D10 685 aaPredicted RBP14.59□□□□□ -0.07
RNF13-201ENST00000344229 KRBA2Q6ZNG9 492 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 HSD3B7Q9H2F3 369 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 IL17RBQ9NRM6 502 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 RBM28Q9NW13 759 aaKnown RBP14.59□□□□□ -0.07
RNF13-201ENST00000344229 ADRA2BP18089 450 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 MDM2Q00987 491 aaPredicted RBP14.59□□□□□ -0.07
RNF13-201ENST00000344229 C12orf60Q5U649 245 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 USP49Q70CQ1 688 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 WDR66Q8TBY9 1149 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 CERKQ8TCT0 537 aa14.59□□□□□ -0.07
RNF13-201ENST00000344229 SERPINB2P05120 415 aa14.58□□□□□ -0.08
RNF13-201ENST00000344229 AKAP17AQ02040 695 aaKnown RBP14.58□□□□□ -0.08
RNF13-201ENST00000344229 ZNF710Q8N1W2 664 aa14.58□□□□□ -0.08
RNF13-201ENST00000344229 TRPC5Q9UL62 973 aaPredicted RBP14.58□□□□□ -0.08
RNF13-201ENST00000344229 CALM1P0DP23 149 aa14.58□□□□□ -0.08
RNF13-201ENST00000344229 CALM2P0DP24 149 aa14.58□□□□□ -0.08
RNF13-201ENST00000344229 CALM3P0DP25 149 aa14.58□□□□□ -0.08
RNF13-201ENST00000344229 TSC1Q92574 1164 aa14.58□□□□□ -0.08
RNF13-201ENST00000344229 RPGRQ92834 1020 aaKnown RBP14.58□□□□□ -0.08
RNF13-201ENST00000344229 TNFRSF25Q93038 417 aa14.58□□□□□ -0.08
RNF13-201ENST00000344229 LTBP1Q14766 1721 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 TSPY2A6NKD2 308 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 BMP6P22004 513 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 PDE4BQ07343 736 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 ZRSR1Q15695 479 aaKnown RBP14.57□□□□□ -0.08
RNF13-201ENST00000344229 C15orf52Q6ZUT6 534 aaKnown RBP14.57□□□□□ -0.08
RNF13-201ENST00000344229 MYH1P12882 1939 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 ANKRD31Q8N7Z5 1873 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 KRT2P35908 639 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 USP5P45974 858 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 TFAP4Q01664 338 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 DDR1Q08345 913 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 ZNF804AQ7Z570 1209 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 LRRC8AQ8IWT6 810 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 CNNM3Q8NE01 707 aa14.57□□□□□ -0.08
RNF13-201ENST00000344229 SRPRBQ9Y5M8 271 aaKnown RBP14.57□□□□□ -0.08
RNF13-201ENST00000344229 PLCD1P51178 756 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 TGFBRAP1Q8WUH2 860 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 CSRNP2Q9H175 543 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 CD209Q9NNX6 404 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 PCDHA5Q9Y5H7 936 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 DDX60LQ5H9U9 1706 aaKnown RBP14.56□□□□□ -0.08
RNF13-201ENST00000344229 POLR2DO15514 142 aaKnown RBP14.56□□□□□ -0.08
RNF13-201ENST00000344229 UFL1O94874 794 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 PRR29P0C7W0 189 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 TMED8Q6PL24 325 aaPredicted RBP14.56□□□□□ -0.08
RNF13-201ENST00000344229 SLC44A5Q8NCS7 719 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 RTFDC1Q9BY42 306 aaPredicted RBP14.56□□□□□ -0.08
RNF13-201ENST00000344229 SERTAD1Q9UHV2 236 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 PPP4CP60510 307 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 GRAMD1CQ8IYS0 662 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
RNF13-201ENST00000344229 CTCFLQ8NI51 663 aaPredicted RBP14.56□□□□□ -0.08
RNF13-201ENST00000344229 XPO4Q9C0E2 1151 aaKnown RBP14.56□□□□□ -0.08
RNF13-201ENST00000344229 POLLQ9UGP5 575 aa14.56□□□□□ -0.08
RNF13-201ENST00000344229 FOCADQ5VW36 1801 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 USP17L3A6NCW0 530 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 USP17L4A6NCW7 530 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 TRIM37O94972 964 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 USP17L1Q7RTZ2 530 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 FILIP1Q7Z7B0 1213 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 ATP1A3P13637 1013 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 XBP1P17861 261 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 ST5P78524 1137 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 MAPKAPK5Q8IW41 473 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 PROM2Q8N271 834 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 STAG2Q8N3U4 1231 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 QTRT2Q9H974 415 aaKnown RBP14.55□□□□□ -0.08
RNF13-201ENST00000344229 IFNKQ9P0W0 207 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 SAP30BPQ9UHR5 308 aaKnown RBP14.55□□□□□ -0.08
RNF13-201ENST00000344229 ROBO3Q96MS0 1386 aa14.55□□□□□ -0.08
RNF13-201ENST00000344229 LRRC37AA6NMS7 1700 aa14.54□□□□□ -0.08
RNF13-201ENST00000344229 A0A087X0B3 334 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms