RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SH2D4AQ9H788 454 aa22.87■■□□□ 1.25
SYNE4-202ENST00000340477 OSBPP22059 807 aa22.86■■□□□ 1.25
SYNE4-202ENST00000340477 PDE4BQ07343 736 aa22.86■■□□□ 1.25
SYNE4-202ENST00000340477 SEPT2Q15019 361 aa22.86■■□□□ 1.25
SYNE4-202ENST00000340477 ARHGEF10LQ9HCE6 1279 aa22.86■■□□□ 1.25
SYNE4-202ENST00000340477 AKR1B1P15121 316 aa22.85■■□□□ 1.25
SYNE4-202ENST00000340477 ICA1Q05084 483 aa22.85■■□□□ 1.25
SYNE4-202ENST00000340477 PPARAQ07869 468 aa22.85■■□□□ 1.25
SYNE4-202ENST00000340477 TREML2Q5T2D2 321 aa22.85■■□□□ 1.25
SYNE4-202ENST00000340477 CWC27Q6UX04 472 aaKnown RBP22.85■■□□□ 1.25
SYNE4-202ENST00000340477 STK11IPQ8N1F8 1099 aa22.85■■□□□ 1.25
SYNE4-202ENST00000340477 CYP2C8P10632 490 aa22.84■■□□□ 1.25
SYNE4-202ENST00000340477 GSPT1P15170 499 aaKnown RBP22.84■■□□□ 1.25
SYNE4-202ENST00000340477 IRX3P78415 501 aaPredicted RBP22.84■■□□□ 1.25
SYNE4-202ENST00000340477 ZYXQ15942 572 aaKnown RBP22.84■■□□□ 1.25
SYNE4-202ENST00000340477 PKN2Q16513 984 aaKnown RBP22.84■■□□□ 1.25
SYNE4-202ENST00000340477 KIAA1683Q9H0B3 1180 aa22.84■■□□□ 1.25
SYNE4-202ENST00000340477 ZNF444Q8N0Y2 327 aaPredicted RBP22.83■■□□□ 1.25
SYNE4-202ENST00000340477 CD99L2Q8TCZ2 262 aa22.83■■□□□ 1.25
SYNE4-202ENST00000340477 MCOLN1Q9GZU1 580 aa22.83■■□□□ 1.25
SYNE4-202ENST00000340477 CPA4Q9UI42 421 aa22.83■■□□□ 1.25
SYNE4-202ENST00000340477 ZMYM6O95789 1325 aa22.82■■□□□ 1.24
SYNE4-202ENST00000340477 SMIM22K7EJ46 135 aa22.82■■□□□ 1.24
SYNE4-202ENST00000340477 HSPD1P10809 573 aaKnown RBP22.82■■□□□ 1.24
SYNE4-202ENST00000340477 GUCY1A2P33402 732 aa22.82■■□□□ 1.24
SYNE4-202ENST00000340477 ALX1Q15699 326 aa22.82■■□□□ 1.24
SYNE4-202ENST00000340477 VPS53Q5VIR6 699 aa22.82■■□□□ 1.24
SYNE4-202ENST00000340477 ZNF589Q86UQ0 364 aaPredicted RBP22.82■■□□□ 1.24
SYNE4-202ENST00000340477 RUFY2Q8WXA3 655 aa22.82■■□□□ 1.24
SYNE4-202ENST00000340477 KANSL2Q9H9L4 492 aa22.82■■□□□ 1.24
SYNE4-202ENST00000340477 ADGRA2Q96PE1 1338 aa22.82■■□□□ 1.24
SYNE4-202ENST00000340477 ATP2B2Q01814 1243 aa22.81■■□□□ 1.24
SYNE4-202ENST00000340477 C17orf99Q6UX52 265 aa22.81■■□□□ 1.24
SYNE4-202ENST00000340477 C12orf42Q96LP6 360 aa22.81■■□□□ 1.24
SYNE4-202ENST00000340477 EFCC1Q9HA90 598 aa22.81■■□□□ 1.24
SYNE4-202ENST00000340477 TRIM17Q9Y577 477 aa22.81■■□□□ 1.24
SYNE4-202ENST00000340477 RAD50Q92878 1312 aa22.81■■□□□ 1.24
SYNE4-202ENST00000340477 RASA1P20936 1047 aa22.8■■□□□ 1.24
SYNE4-202ENST00000340477 GCLCP48506 637 aaPredicted RBP22.8■■□□□ 1.24
SYNE4-202ENST00000340477 ACER1Q8TDN7 264 aa22.8■■□□□ 1.24
SYNE4-202ENST00000340477 ASCC2Q9H1I8 757 aaPredicted RBP22.8■■□□□ 1.24
SYNE4-202ENST00000340477 GREB1LQ9C091 1923 aaPredicted RBP22.8■■□□□ 1.24
SYNE4-202ENST00000340477 PRDM1O75626 825 aa22.79■■□□□ 1.24
SYNE4-202ENST00000340477 TSPY3P0CV98 308 aa22.79■■□□□ 1.24
SYNE4-202ENST00000340477 TSPY8P0CW00 308 aa22.79■■□□□ 1.24
SYNE4-202ENST00000340477 HOXA7P31268 230 aaPredicted RBP22.79■■□□□ 1.24
SYNE4-202ENST00000340477 LACTBP83111 547 aaPredicted RBP22.79■■□□□ 1.24
SYNE4-202ENST00000340477 ERICH6BQ5W0A0 696 aa22.79■■□□□ 1.24
SYNE4-202ENST00000340477 GTF3C2Q8WUA4 911 aaPredicted RBP22.79■■□□□ 1.24
SYNE4-202ENST00000340477 EMILIN3Q9NT22 766 aa22.79■■□□□ 1.24
SYNE4-202ENST00000340477 USP17L15C9J2P7 530 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 USP17L13C9JLJ4 530 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 USP17L11C9JVI0 530 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 USP17L18D6R9N7 530 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 USP17L22D6RA61 530 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 USP17L17D6RBQ6 530 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 USP17L19D6RCP7 530 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 USP17L20D6RJB6 530 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 FOXP2O15409 715 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 FGAP02671 866 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 USP17L24Q0WX57 530 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 PPP4R3BQ5MIZ7 849 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 LPAR1Q92633 364 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 ANAPC4Q9UJX5 808 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 LAMA4Q16363 1823 aa22.78■■□□□ 1.24
SYNE4-202ENST00000340477 GNRH1P01148 92 aa22.77■■□□□ 1.24
SYNE4-202ENST00000340477 BCRP11274 1271 aa22.77■■□□□ 1.24
SYNE4-202ENST00000340477 VCAM1P19320 739 aa22.77■■□□□ 1.24
SYNE4-202ENST00000340477 CTDSPL2Q05D32 466 aa22.77■■□□□ 1.24
SYNE4-202ENST00000340477 OTOP1Q7RTM1 612 aa22.77■■□□□ 1.24
SYNE4-202ENST00000340477 GOPCQ9HD26 462 aa22.77■■□□□ 1.24
SYNE4-202ENST00000340477 TOMM22Q9NS69 142 aa22.77■■□□□ 1.24
SYNE4-202ENST00000340477 MYH4Q9Y623 1939 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 EEF2P13639 858 aaKnown RBP22.76■■□□□ 1.23
SYNE4-202ENST00000340477 FCGRTP55899 365 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 FAM110CQ1W6H9 321 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 FBXO46Q6PJ61 603 aaPredicted RBP22.76■■□□□ 1.23
SYNE4-202ENST00000340477 CLEC10AQ8IUN9 316 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 ANKRD13CQ8N6S4 541 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 ABHD8Q96I13 439 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 DSCC1Q9BVC3 393 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 CTNNA3Q9UI47 895 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 TMX2Q9Y320 296 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 MGAMO43451 1857 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 PLIN4Q96Q06 1357 aa22.76■■□□□ 1.23
SYNE4-202ENST00000340477 A0A1W2PRG0 241 aa22.75■■□□□ 1.23
SYNE4-202ENST00000340477 TSPY2A6NKD2 308 aa22.75■■□□□ 1.23
SYNE4-202ENST00000340477 RAD21O60216 631 aa22.75■■□□□ 1.23
SYNE4-202ENST00000340477 FMNL1O95466 1100 aaPredicted RBP22.75■■□□□ 1.23
SYNE4-202ENST00000340477 HERVK_113P62684 666 aa22.75■■□□□ 1.23
SYNE4-202ENST00000340477 TANGO6Q9C0B7 1094 aa22.75■■□□□ 1.23
SYNE4-202ENST00000340477 RNF41Q9H4P4 317 aaPredicted RBP22.75■■□□□ 1.23
SYNE4-202ENST00000340477 RPAP3Q9H6T3 665 aaPredicted RBP22.75■■□□□ 1.23
SYNE4-202ENST00000340477 VCPKMTQ9H867 229 aa22.75■■□□□ 1.23
SYNE4-202ENST00000340477 PCP11498 1178 aaKnown RBP22.74■■□□□ 1.23
SYNE4-202ENST00000340477 CHMLP26374 656 aa22.74■■□□□ 1.23
SYNE4-202ENST00000340477 HOXD10P28358 340 aa22.74■■□□□ 1.23
SYNE4-202ENST00000340477 PPP4R2Q9NY27 417 aa22.74■■□□□ 1.23
SYNE4-202ENST00000340477 NYAP2Q9P242 653 aa22.74■■□□□ 1.23
SYNE4-202ENST00000340477 ZNF213O14771 459 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms