RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 SH2D4AQ9H788 454 aa13.5□□□□□ -0.25
SLC28A1-202ENST00000338602 ATAD5Q96QE3 1844 aa13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 PDE4BQ07343 736 aa13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 SEPT2Q15019 361 aa13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 TTC22Q5TAA0 569 aa13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 CCDC129Q6ZRS4 1044 aa13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 ZNF444Q8N0Y2 327 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 FAM227BQ96M60 508 aa13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 ARHGEF10LQ9HCE6 1279 aa13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 EPB41L4AQ9HCS5 686 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 BAZ2AQ9UIF9 1905 aaKnown RBP13.49□□□□□ -0.25
SLC28A1-202ENST00000338602 A0A0D9SFI3 127 aa13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 CYP2C8P10632 490 aa13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 IRX3P78415 501 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 EVX2Q03828 476 aa13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 SHROOM1Q2M3G4 852 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 C17orf99Q6UX52 265 aa13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 KIAA1683Q9H0B3 1180 aa13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 EFCC1Q9HA90 598 aa13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 CPA4Q9UI42 421 aa13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 GTF3C3Q9Y5Q9 886 aa13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 CCDC171Q6TFL3 1326 aa13.48□□□□□ -0.25
SLC28A1-202ENST00000338602 PHIPQ8WWQ0 1821 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 ROBO3Q96MS0 1386 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 AKR1B1P15121 316 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 GCLCP48506 637 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 PPARAQ07869 468 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 ALX1Q15699 326 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 TREML2Q5T2D2 321 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 CWC27Q6UX04 472 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 STK11IPQ8N1F8 1099 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 CD99L2Q8TCZ2 262 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 RUFY2Q8WXA3 655 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 KANSL2Q9H9L4 492 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 TRIM17Q9Y577 477 aa13.47□□□□□ -0.25
SLC28A1-202ENST00000338602 GNRH1P01148 92 aa13.46□□□□□ -0.25
SLC28A1-202ENST00000338602 HSPD1P10809 573 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-202ENST00000338602 HOXA7P31268 230 aaPredicted RBP13.46□□□□□ -0.25
SLC28A1-202ENST00000338602 GUCY1A2P33402 732 aa13.46□□□□□ -0.25
SLC28A1-202ENST00000338602 ICA1Q05084 483 aa13.46□□□□□ -0.25
SLC28A1-202ENST00000338602 ZYXQ15942 572 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-202ENST00000338602 GTF3C2Q8WUA4 911 aaPredicted RBP13.46□□□□□ -0.25
SLC28A1-202ENST00000338602 C12orf42Q96LP6 360 aa13.46□□□□□ -0.25
SLC28A1-202ENST00000338602 EMILIN3Q9NT22 766 aa13.46□□□□□ -0.25
SLC28A1-202ENST00000338602 USP17L15C9J2P7 530 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 USP17L13C9JLJ4 530 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 USP17L11C9JVI0 530 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 USP17L18D6R9N7 530 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 USP17L22D6RA61 530 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 USP17L17D6RBQ6 530 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 USP17L19D6RCP7 530 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 USP17L20D6RJB6 530 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 HOXD10P28358 340 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 LACTBP83111 547 aaPredicted RBP13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 ATP2B2Q01814 1243 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 USP17L24Q0WX57 530 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 FBXO46Q6PJ61 603 aaPredicted RBP13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 OTOP1Q7RTM1 612 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 ACER1Q8TDN7 264 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 ASCC2Q9H1I8 757 aaPredicted RBP13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 ZMYM6O95789 1325 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 ADGRA2Q96PE1 1338 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 SMIM22K7EJ46 135 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 FMNL1O95466 1100 aaPredicted RBP13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 FGAP02671 866 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 TSPY3P0CV98 308 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 TSPY8P0CW00 308 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 GSPT1P15170 499 aaKnown RBP13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 RASA1P20936 1047 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 PRMT2P55345 433 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 FCGRTP55899 365 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 VPS53Q5VIR6 699 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 ERICH6BQ5W0A0 696 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 ZNF589Q86UQ0 364 aaPredicted RBP13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 LPAR1Q92633 364 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 ANAPC4Q9UJX5 808 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 TMX2Q9Y320 296 aa13.45□□□□□ -0.26
SLC28A1-202ENST00000338602 PTPRFP10586 1907 aa13.44□□□□□ -0.26
SLC28A1-202ENST00000338602 MYH8P13535 1937 aa13.44□□□□□ -0.26
SLC28A1-202ENST00000338602 PRDM1O75626 825 aa13.44□□□□□ -0.26
SLC28A1-202ENST00000338602 BCRP11274 1271 aa13.44□□□□□ -0.26
SLC28A1-202ENST00000338602 PSMC4P43686 418 aa13.44□□□□□ -0.26
SLC28A1-202ENST00000338602 FAM110CQ1W6H9 321 aa13.44□□□□□ -0.26
SLC28A1-202ENST00000338602 ANKRD13CQ8N6S4 541 aa13.44□□□□□ -0.26
SLC28A1-202ENST00000338602 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
SLC28A1-202ENST00000338602 CTNNA3Q9UI47 895 aa13.44□□□□□ -0.26
SLC28A1-202ENST00000338602 RAD50Q92878 1312 aa13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 LOC285556D6RIA3 1793 aa13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 ZNF213O14771 459 aa13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 PCP11498 1178 aaKnown RBP13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 EEF2P13639 858 aaKnown RBP13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 VCAM1P19320 739 aa13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 HERVK_113P62684 666 aa13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 CATSPERGQ6ZRH7 1159 aa13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 CCAR1Q8IX12 1150 aaKnown RBP13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 P2RX7Q99572 595 aaKnown RBP13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 DSCC1Q9BVC3 393 aa13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 RNF41Q9H4P4 317 aaPredicted RBP13.43□□□□□ -0.26
SLC28A1-202ENST00000338602 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms