RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 USP17L11C9JVI0 530 aa29.62■■■□□ 2.33
CDKN3-202ENST00000335183 USP17L18D6R9N7 530 aa29.62■■■□□ 2.33
CDKN3-202ENST00000335183 USP17L22D6RA61 530 aa29.62■■■□□ 2.33
CDKN3-202ENST00000335183 USP17L17D6RBQ6 530 aa29.62■■■□□ 2.33
CDKN3-202ENST00000335183 USP17L19D6RCP7 530 aa29.62■■■□□ 2.33
CDKN3-202ENST00000335183 USP17L20D6RJB6 530 aa29.62■■■□□ 2.33
CDKN3-202ENST00000335183 USP14P54578 494 aa29.62■■■□□ 2.33
CDKN3-202ENST00000335183 USP17L24Q0WX57 530 aa29.62■■■□□ 2.33
CDKN3-202ENST00000335183 TMED8Q6PL24 325 aaPredicted RBP29.62■■■□□ 2.33
CDKN3-202ENST00000335183 RHPN1Q8TCX5 695 aa29.62■■■□□ 2.33
CDKN3-202ENST00000335183 RIOK1Q9BRS2 568 aaKnown RBP29.62■■■□□ 2.33
CDKN3-202ENST00000335183 MYH8P13535 1937 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 MAGEB6P1A0A0J9YX57 407 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 A0A1W2PPC1 479 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 APBB1O00213 710 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 POLR3DP05423 398 aaPredicted RBP29.61■■■□□ 2.33
CDKN3-202ENST00000335183 MNX1P50219 401 aaPredicted RBP29.61■■■□□ 2.33
CDKN3-202ENST00000335183 PLCD1P51178 756 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 CACNB2Q08289 660 aaPredicted RBP29.61■■■□□ 2.33
CDKN3-202ENST00000335183 CCL14Q16627 93 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 HSP90AB4PQ58FF6 505 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 MORN1Q5T089 497 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 ACER1Q8TDN7 264 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 USP6NLQ92738 828 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 BCL11AQ9H165 835 aa29.61■■■□□ 2.33
CDKN3-202ENST00000335183 ZMYND8Q9ULU4 1186 aaPredicted RBP29.61■■■□□ 2.33
CDKN3-202ENST00000335183 FRMPD3Q5JV73 1810 aa29.6■■■□□ 2.33
CDKN3-202ENST00000335183 TTF1Q15361 905 aaPredicted RBP29.6■■■□□ 2.33
CDKN3-202ENST00000335183 WDR78Q5VTH9 848 aa29.6■■■□□ 2.33
CDKN3-202ENST00000335183 APBA2Q99767 749 aa29.6■■■□□ 2.33
CDKN3-202ENST00000335183 RABGAP1Q9Y3P9 1069 aa29.6■■■□□ 2.33
CDKN3-202ENST00000335183 CNMDO75829 334 aa29.59■■■□□ 2.33
CDKN3-202ENST00000335183 VCAM1P19320 739 aa29.59■■■□□ 2.33
CDKN3-202ENST00000335183 SHMT1P34896 483 aa29.59■■■□□ 2.33
CDKN3-202ENST00000335183 CATSPERGQ6ZRH7 1159 aa29.59■■■□□ 2.33
CDKN3-202ENST00000335183 KIAA1683Q9H0B3 1180 aa29.59■■■□□ 2.33
CDKN3-202ENST00000335183 CCND3P30281 292 aaPredicted RBP29.58■■■□□ 2.33
CDKN3-202ENST00000335183 CCNA1P78396 465 aa29.58■■■□□ 2.33
CDKN3-202ENST00000335183 SLC9C2Q5TAH2 1124 aa29.58■■■□□ 2.33
CDKN3-202ENST00000335183 SZT2Q5T011 3432 aa29.58■■■□□ 2.33
CDKN3-202ENST00000335183 PDE6AP16499 860 aa29.57■■■□□ 2.32
CDKN3-202ENST00000335183 SYN1P17600 705 aa29.57■■■□□ 2.32
CDKN3-202ENST00000335183 MAP2K5Q13163 448 aa29.57■■■□□ 2.32
CDKN3-202ENST00000335183 CLASRPQ8N2M8 674 aaKnown RBP29.57■■■□□ 2.32
CDKN3-202ENST00000335183 DNAJC2Q99543 621 aaKnown RBP29.57■■■□□ 2.32
CDKN3-202ENST00000335183 CRNKL1Q9BZJ0 848 aaKnown RBP29.57■■■□□ 2.32
CDKN3-202ENST00000335183 MCM9Q9NXL9 1143 aa29.57■■■□□ 2.32
CDKN3-202ENST00000335183 RANBP2P49792 3224 aaKnown RBP29.56■■■□□ 2.32
CDKN3-202ENST00000335183 ZBED9Q6R2W3 1325 aa29.56■■■□□ 2.32
CDKN3-202ENST00000335183 GLRX3O76003 335 aaKnown RBP29.56■■■□□ 2.32
CDKN3-202ENST00000335183 RPAP3Q9H6T3 665 aaPredicted RBP29.56■■■□□ 2.32
CDKN3-202ENST00000335183 ZNF532Q9HCE3 1301 aa29.55■■■□□ 2.32
CDKN3-202ENST00000335183 GOLIM4O00461 696 aa29.55■■■□□ 2.32
CDKN3-202ENST00000335183 MPHOSPH10O00566 681 aaKnown RBP29.55■■■□□ 2.32
CDKN3-202ENST00000335183 SOX1O00570 391 aaPredicted RBP29.55■■■□□ 2.32
CDKN3-202ENST00000335183 GUCY1A2P33402 732 aa29.55■■■□□ 2.32
CDKN3-202ENST00000335183 SEPT2Q15019 361 aa29.55■■■□□ 2.32
CDKN3-202ENST00000335183 EDC3Q96F86 508 aaKnown RBP29.55■■■□□ 2.32
CDKN3-202ENST00000335183 PFASO15067 1338 aa29.54■■■□□ 2.32
CDKN3-202ENST00000335183 IFIT2P09913 472 aaKnown RBP29.54■■■□□ 2.32
CDKN3-202ENST00000335183 EVX2Q03828 476 aa29.54■■■□□ 2.32
CDKN3-202ENST00000335183 KIF1BPQ96EK5 621 aa29.54■■■□□ 2.32
CDKN3-202ENST00000335183 GDF15Q99988 308 aa29.54■■■□□ 2.32
CDKN3-202ENST00000335183 BTBD7Q9P203 1132 aa29.54■■■□□ 2.32
CDKN3-202ENST00000335183 BAZ2AQ9UIF9 1905 aaKnown RBP29.53■■■□□ 2.32
CDKN3-202ENST00000335183 MS4A1P11836 297 aa29.53■■■□□ 2.32
CDKN3-202ENST00000335183 GABPAQ06546 454 aa29.53■■■□□ 2.32
CDKN3-202ENST00000335183 SDR42E1Q8WUS8 393 aa29.53■■■□□ 2.32
CDKN3-202ENST00000335183 LRCH3Q96II8 777 aa29.53■■■□□ 2.32
CDKN3-202ENST00000335183 IVNS1ABPQ9Y6Y0 642 aa29.53■■■□□ 2.32
CDKN3-202ENST00000335183 SPDYE16A6NNV3 312 aaPredicted RBP29.52■■■□□ 2.32
CDKN3-202ENST00000335183 LHX8Q68G74 356 aa29.52■■■□□ 2.32
CDKN3-202ENST00000335183 LBX2Q6XYB7 198 aa29.52■■■□□ 2.32
CDKN3-202ENST00000335183 LCORLQ8N3X6 602 aa29.52■■■□□ 2.32
CDKN3-202ENST00000335183 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.52■■■□□ 2.32
CDKN3-202ENST00000335183 SLC15A5A6NIM6 579 aa29.51■■■□□ 2.31
CDKN3-202ENST00000335183 HMMRO75330 724 aa29.51■■■□□ 2.31
CDKN3-202ENST00000335183 PTPREP23469 700 aa29.51■■■□□ 2.31
CDKN3-202ENST00000335183 BMP8BP34820 402 aa29.51■■■□□ 2.31
CDKN3-202ENST00000335183 MFSD14CQ5VZR4 134 aa29.51■■■□□ 2.31
CDKN3-202ENST00000335183 DIEXFQ68CQ4 756 aaKnown RBP29.51■■■□□ 2.31
CDKN3-202ENST00000335183 RPAP2Q8IXW5 612 aaPredicted RBP29.51■■■□□ 2.31
CDKN3-202ENST00000335183 FLRT1Q9NZU1 646 aa29.51■■■□□ 2.31
CDKN3-202ENST00000335183 MYH7P12883 1935 aa29.5■■■□□ 2.31
CDKN3-202ENST00000335183 DCP1AQ9NPI6 582 aaPredicted RBP29.5■■■□□ 2.31
CDKN3-202ENST00000335183 COG6Q9Y2V7 657 aa29.5■■■□□ 2.31
CDKN3-202ENST00000335183 A0A1W2PRG0 241 aa29.49■■■□□ 2.31
CDKN3-202ENST00000335183 TCRBV5S4A2TA0A5A2 114 aa29.49■■■□□ 2.31
CDKN3-202ENST00000335183 CYP2D6P10635 497 aa29.49■■■□□ 2.31
CDKN3-202ENST00000335183 MAGEA10P43363 369 aaPredicted RBP29.49■■■□□ 2.31
CDKN3-202ENST00000335183 ARMT1Q9H993 441 aa29.49■■■□□ 2.31
CDKN3-202ENST00000335183 COL6A1P12109 1028 aa29.48■■■□□ 2.31
CDKN3-202ENST00000335183 ATP2B2Q01814 1243 aa29.48■■■□□ 2.31
CDKN3-202ENST00000335183 SLC44A5Q8NCS7 719 aa29.48■■■□□ 2.31
CDKN3-202ENST00000335183 TANGO6Q9C0B7 1094 aa29.48■■■□□ 2.31
CDKN3-202ENST00000335183 DDX19BQ9UMR2 479 aa29.48■■■□□ 2.31
CDKN3-202ENST00000335183 RLFQ13129 1914 aa29.47■■■□□ 2.31
CDKN3-202ENST00000335183 CNGA1P29973 690 aa29.47■■■□□ 2.31
CDKN3-202ENST00000335183 GRB14Q14449 540 aa29.47■■■□□ 2.31
CDKN3-202ENST00000335183 SIRT2Q8IXJ6 389 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms