RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 LRRC8AQ8IWT6 810 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 DNM3Q9UQ16 869 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 TNFAIP3P21580 790 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 DNAJC21Q5F1R6 531 aaKnown RBP19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 SEL1L2Q5TEA6 688 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 FBF1Q8TES7 1133 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 NT5C3AQ9H0P0 336 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 TSKSQ9UJT2 592 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 NDUFA8P51970 172 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 BLIDQ8IZY5 108 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 NSUN7Q8NE18 718 aaKnown RBP19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 TET3O43151 1660 aa19.05■□□□□ 0.64
TRAPPC11-201ENST00000334690 BACH1O14867 736 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 FAM47AQ5JRC9 791 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 CCDC50Q8IVM0 306 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 IFT20Q8IY31 132 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 POLR3EQ9NVU0 708 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 RCOR1Q9UKL0 485 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 PLS1Q14651 629 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 TGFBRAP1Q8WUH2 860 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 ACTN4O43707 911 aaKnown RBP19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 SMTNP53814 917 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 GALNT17Q6IS24 598 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 DYMQ7RTS9 669 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 ZNF589Q86UQ0 364 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 GPR161Q8N6U8 529 aaKnown RBP19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 AFAP1L1Q8TED9 768 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 BLZF1Q9H2G9 400 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 ZBTB21Q9ULJ3 1066 aa19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.04■□□□□ 0.64
TRAPPC11-201ENST00000334690 GJC1P36383 396 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 ADKP55263 362 aaKnown RBP19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 PPP1R7Q15435 360 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 KIFAP3Q92845 792 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 SELENOSQ9BQE4 189 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 LMTK3Q96Q04 1460 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 ARHGEF35A5YM69 484 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 SCG2P13521 617 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 APOA5Q6Q788 366 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 TICAM2Q86XR7 235 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 ADCY10Q96PN6 1610 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 SMCO2A6NFE2 343 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 FLOT1O75955 427 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 NBPF14Q5TI25 921 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 PNMA1Q8ND90 353 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 LRRC45Q96CN5 670 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 TSNARE1Q96NA8 513 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 PAIP2Q9BPZ3 127 aaKnown RBP19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 FANCLQ9NW38 375 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 IQGAP3Q86VI3 1631 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 PSDA5PKW4 1024 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 DNM2P50570 870 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 GREM2Q9H772 168 aa19.03■□□□□ 0.64
TRAPPC11-201ENST00000334690 H7C1D1 291 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 SPOPO43791 374 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 PHKA1P46020 1223 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 BCAMP50895 628 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 UTP14CQ5TAP6 766 aaKnown RBP19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 SPATA1Q5VX52 437 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 MICALL1Q8N3F8 863 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 PUS3Q9BZE2 481 aaKnown RBP19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 DDAH1O94760 285 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 KLHL30Q0D2K2 578 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 ATP8A2Q9NTI2 1148 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 ERBB3P21860 1342 aa19.02■□□□□ 0.64
TRAPPC11-201ENST00000334690 GYG1P46976 350 aa19.02■□□□□ 0.63
TRAPPC11-201ENST00000334690 RBM26Q5T8P6 1007 aaKnown RBP19.02■□□□□ 0.63
TRAPPC11-201ENST00000334690 SDR42E1Q8WUS8 393 aa19.02■□□□□ 0.63
TRAPPC11-201ENST00000334690 PCDHA5Q9Y5H7 936 aa19.02■□□□□ 0.63
TRAPPC11-201ENST00000334690 DKC1O60832 514 aaKnown RBP eCLIP19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 PPP6R2O75170 966 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 NECTIN1Q15223 517 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 DPP8Q6V1X1 898 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 SREK1Q8WXA9 508 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 GTPBP6O43824 516 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 NCAPH2Q6IBW4 605 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 CCDC25Q86WR0 208 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 PI4K2BQ8TCG2 481 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 FNBP1Q96RU3 617 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 CLIC4Q9Y696 253 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 CARMIL3Q8ND23 1372 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 ARHGAP31Q2M1Z3 1444 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 WDR44Q5JSH3 913 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 UBLCP1Q8WVY7 318 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 CARD10Q9BWT7 1032 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 IFIH1Q9BYX4 1025 aaKnown RBP19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 BRD3Q15059 726 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 CFAP221Q4G0U5 840 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 RNF26Q9BY78 433 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 ZNF215Q9UL58 517 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 SAR1BQ9Y6B6 198 aa19.01■□□□□ 0.63
TRAPPC11-201ENST00000334690 KCNJ18B7U540 433 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 GNA14O95837 355 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 ADORA1P30542 326 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 IL6STP40189 918 aaPredicted RBP19■□□□□ 0.63
TRAPPC11-201ENST00000334690 PTPN12Q05209 780 aaKnown RBP19■□□□□ 0.63
TRAPPC11-201ENST00000334690 KCNJ12Q14500 433 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 WHAMMP3Q1A5X7 153 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 CSRNP2Q9H175 543 aa19■□□□□ 0.63
TRAPPC11-201ENST00000334690 FOXP1Q9H334 677 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms