RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 DACT1Q9NYF0 836 aa19.45■□□□□ 0.7
PDCD1-201ENST00000334409 GOLGA6L19H0YKK7 550 aa19.44■□□□□ 0.7
PDCD1-201ENST00000334409 ZNF213O14771 459 aa19.44■□□□□ 0.7
PDCD1-201ENST00000334409 CTDSPL2Q05D32 466 aa19.44■□□□□ 0.7
PDCD1-201ENST00000334409 STK3Q13188 491 aa19.44■□□□□ 0.7
PDCD1-201ENST00000334409 IMMTQ16891 758 aaKnown RBP19.44■□□□□ 0.7
PDCD1-201ENST00000334409 TGFBRAP1Q8WUH2 860 aa19.44■□□□□ 0.7
PDCD1-201ENST00000334409 LLPHQ9BRT6 129 aaKnown RBP19.44■□□□□ 0.7
PDCD1-201ENST00000334409 NBPF3Q9H094 633 aa19.44■□□□□ 0.7
PDCD1-201ENST00000334409 VPS33BQ9H267 617 aa19.44■□□□□ 0.7
PDCD1-201ENST00000334409 PSD3Q9NYI0 1048 aa19.44■□□□□ 0.7
PDCD1-201ENST00000334409 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDCD1-201ENST00000334409 BAZ2AQ9UIF9 1905 aaKnown RBP19.44■□□□□ 0.7
PDCD1-201ENST00000334409 GPR75-ASB3A0A0A6YYF3 556 aa19.43■□□□□ 0.7
PDCD1-201ENST00000334409 MINDY4BA8MYZ0 360 aa19.43■□□□□ 0.7
PDCD1-201ENST00000334409 BAG3O95817 575 aa19.43■□□□□ 0.7
PDCD1-201ENST00000334409 HMGB1P09429 215 aaKnown RBP19.43■□□□□ 0.7
PDCD1-201ENST00000334409 Q6ZUG5 572 aa19.43■□□□□ 0.7
PDCD1-201ENST00000334409 SRRTQ9BXP5 876 aaKnown RBP19.43■□□□□ 0.7
PDCD1-201ENST00000334409 CRNKL1Q9BZJ0 848 aaKnown RBP19.43■□□□□ 0.7
PDCD1-201ENST00000334409 UBXN6Q9BZV1 441 aa19.43■□□□□ 0.7
PDCD1-201ENST00000334409 SUGT1Q9Y2Z0 365 aa19.43■□□□□ 0.7
PDCD1-201ENST00000334409 ZNF646O15015 1829 aaPredicted RBP19.43■□□□□ 0.7
PDCD1-201ENST00000334409 CRKP46108 304 aa19.43■□□□□ 0.7
PDCD1-201ENST00000334409 NOM1Q5C9Z4 860 aaKnown RBP19.43■□□□□ 0.7
PDCD1-201ENST00000334409 RSBN1LQ6PCB5 846 aaPredicted RBP19.43■□□□□ 0.7
PDCD1-201ENST00000334409 NACAP1Q9BZK3 213 aa19.43■□□□□ 0.7
PDCD1-201ENST00000334409 E7EWF7 191 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 DHX16O60231 1041 aaKnown RBP19.42■□□□□ 0.7
PDCD1-201ENST00000334409 VIL1P09327 827 aaKnown RBP19.42■□□□□ 0.7
PDCD1-201ENST00000334409 USP5P45974 858 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 KRBA2Q6ZNG9 492 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 MAPKAPK5Q8IW41 473 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 SLF2Q8IX21 1173 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 IQUBQ8NA54 791 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 SMARCC2Q8TAQ2 1214 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 NKX2-3Q8TAU0 364 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 GOLGA5Q8TBA6 731 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 TEKT1Q969V4 418 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 TFIP11Q9UBB9 837 aaKnown RBP19.42■□□□□ 0.7
PDCD1-201ENST00000334409 GAKO14976 1311 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 SHTN1A0MZ66 631 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 MYO1CO00159 1063 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 JAK2O60674 1132 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 CYP2D6P10635 497 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 CCZ1BP86790 482 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 CCZ1P86791 482 aaPredicted RBP19.42■□□□□ 0.7
PDCD1-201ENST00000334409 SNW1Q13573 536 aaKnown RBP19.42■□□□□ 0.7
PDCD1-201ENST00000334409 CAMK4Q16566 473 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 ICE2Q659A1 982 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 SYT10Q6XYQ8 523 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 CHST3Q7LGC8 479 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 TBC1D10CQ8IV04 446 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 BRF1Q92994 677 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 FAM163AQ96GL9 167 aaPredicted RBP19.42■□□□□ 0.7
PDCD1-201ENST00000334409 TRERF1Q96PN7 1200 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 DCP1AQ9NPI6 582 aaPredicted RBP19.42■□□□□ 0.7
PDCD1-201ENST00000334409 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 TACC3Q9Y6A5 838 aa19.42■□□□□ 0.7
PDCD1-201ENST00000334409 LTBP3Q9NS15 1303 aa19.41■□□□□ 0.7
PDCD1-201ENST00000334409 CCDC69A6NI79 296 aa19.41■□□□□ 0.7
PDCD1-201ENST00000334409 USP27XA6NNY8 438 aa19.41■□□□□ 0.7
PDCD1-201ENST00000334409 GTF2A1P52655 376 aaPredicted RBP19.41■□□□□ 0.7
PDCD1-201ENST00000334409 RHBDL3P58872 404 aa19.41■□□□□ 0.7
PDCD1-201ENST00000334409 PPP4CP60510 307 aa19.41■□□□□ 0.7
PDCD1-201ENST00000334409 TEX11Q8IYF3 940 aa19.41■□□□□ 0.7
PDCD1-201ENST00000334409 PGBD1Q96JS3 809 aa19.41■□□□□ 0.7
PDCD1-201ENST00000334409 LRRC2Q9BYS8 371 aa19.41■□□□□ 0.7
PDCD1-201ENST00000334409 SAP30BPQ9UHR5 308 aaKnown RBP19.41■□□□□ 0.7
PDCD1-201ENST00000334409 GJA3Q9Y6H8 435 aa19.41■□□□□ 0.7
PDCD1-201ENST00000334409 USP17L12C9JPN9 530 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 USP17L21D6R901 530 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 PFKFB2O60825 505 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 USP17L8P0C7I0 530 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 CACNB3P54284 484 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 FKBP1AP62942 108 aaKnown RBP19.4■□□□□ 0.7
PDCD1-201ENST00000334409 ALX1Q15699 326 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 ZSCAN26Q16670 478 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 CIAPIN1Q6FI81 312 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 APOBEC3HQ6NTF7 200 aaKnown RBP19.4■□□□□ 0.7
PDCD1-201ENST00000334409 MCM9Q9NXL9 1143 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 IMPACTQ9P2X3 320 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.4■□□□□ 0.7
PDCD1-201ENST00000334409 H3BQV1 296 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 CCP110O43303 1012 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 PICALMQ13492 652 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 ERCC6LQ2NKX8 1250 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 USP40Q9NVE5 1235 aa19.4■□□□□ 0.7
PDCD1-201ENST00000334409 NRDCO43847 1150 aa19.39■□□□□ 0.69
PDCD1-201ENST00000334409 DHX32Q7L7V1 743 aaKnown RBP19.39■□□□□ 0.69
PDCD1-201ENST00000334409 CKAP2LQ8IYA6 745 aa19.39■□□□□ 0.69
PDCD1-201ENST00000334409 FBXO18Q8NFZ0 1043 aa19.39■□□□□ 0.69
PDCD1-201ENST00000334409 BICD2Q8TD16 824 aa19.39■□□□□ 0.69
PDCD1-201ENST00000334409 SCRN1Q12765 414 aa19.39■□□□□ 0.69
PDCD1-201ENST00000334409 CFAP100Q494V2 611 aa19.39■□□□□ 0.69
PDCD1-201ENST00000334409 ARHGAP29Q52LW3 1261 aa19.39■□□□□ 0.69
PDCD1-201ENST00000334409 CDC42EP5Q6NZY7 148 aa19.39■□□□□ 0.69
PDCD1-201ENST00000334409 HHIPL2Q6UWX4 724 aa19.39■□□□□ 0.69
PDCD1-201ENST00000334409 NEK11Q8NG66 645 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms