RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 NUDT16Q96DE0 195 aaKnown RBP9.43□□□□□ -0.9
SKA2-201ENST00000330137 RUFY1Q96T51 708 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 MOV10L1Q9BXT6 1211 aaKnown RBP9.43□□□□□ -0.9
SKA2-201ENST00000330137 CD248Q9HCU0 757 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 SLC40A1Q9NP59 571 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 MAN1B1Q9UKM7 699 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 KCNH3Q9ULD8 1083 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 COL15A1P39059 1388 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 HSF2BPO75031 334 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 GHRP10912 638 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 CDKAL1Q5VV42 579 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 NAA35Q5VZE5 725 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 ARFGAP2Q8N6H7 521 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 ZNF483Q8TF39 744 aaPredicted RBP9.43□□□□□ -0.9
SKA2-201ENST00000330137 ETAA1Q9NY74 926 aa9.43□□□□□ -0.9
SKA2-201ENST00000330137 PRPHP41219 470 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 CLNS1AP54105 237 aaKnown RBP9.42□□□□□ -0.9
SKA2-201ENST00000330137 SPAG1Q07617 926 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 TBC1D8BQ0IIM8 1120 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 TRAF1Q13077 416 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 XRCC4Q13426 336 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 POSTNQ15063 836 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 MREGQ8N565 214 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 DDX20Q9UHI6 824 aaKnown RBP9.42□□□□□ -0.9
SKA2-201ENST00000330137 BMP6P22004 513 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 LSP1P33241 339 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 KRT83P78385 493 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 PDE4BQ07343 736 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 BIRC2Q13490 618 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 RIPK1Q13546 671 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 RBBP5Q15291 538 aaKnown RBP9.42□□□□□ -0.9
SKA2-201ENST00000330137 CYB5D1Q6P9G0 228 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 FOXP4Q8IVH2 680 aaPredicted RBP9.42□□□□□ -0.9
SKA2-201ENST00000330137 ANKRD27Q96NW4 1050 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 MAP3K14Q99558 947 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 BOLA2Q9H3K6 86 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 ZRANB1Q9UGI0 708 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 ZNF609O15014 1411 aa9.42□□□□□ -0.9
SKA2-201ENST00000330137 MGRN1O60291 552 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 PPP1R37O75864 691 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 CDKL5O76039 1030 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 PAX7P23759 505 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 STOX1Q6ZVD7 989 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 NBPF5PQ86XG9 351 aaPredicted RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 FUKQ8N0W3 1084 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 ZNF473Q8WTR7 871 aaKnown RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 CDC5LQ99459 802 aaKnown RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 HAUS7Q99871 368 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 PHAXQ9H814 394 aaKnown RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 ABHD10Q9NUJ1 306 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 HMGB1P1B2RPK0 211 aaPredicted RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 DNAJC8O75937 253 aaPredicted RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 HSPA1LP34931 641 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 PDCD2Q16342 344 aaPredicted RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 PTGISQ16647 500 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 NCAPH2Q6IBW4 605 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 CCDC121Q6ZUS5 278 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 CADPS2Q86UW7 1296 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 EIF1ADQ8N9N8 165 aaKnown RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 KRI1Q8N9T8 703 aaKnown RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 C9orf78Q9NZ63 289 aaPredicted RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 SLAIN2Q9P270 581 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 UBN2Q6ZU65 1347 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 PI4KAP2A4QPH2 592 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 E7EWF7 191 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 KRT86O43790 486 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 GYPCP04921 128 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 CCT2P78371 535 aaKnown RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 LONRF3Q496Y0 759 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 NAIF1Q69YI7 327 aaPredicted RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 CCDC155Q8N6L0 562 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 PI4KAP1Q8N8J0 262 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 RIN2Q8WYP3 895 aaPredicted RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 CCDC47Q96A33 483 aaKnown RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 MMS19Q96T76 1030 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 TMX4Q9H1E5 349 aaPredicted RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 EBF2Q9HAK2 575 aa9.41□□□□□ -0.9
SKA2-201ENST00000330137 LIMA1Q9UHB6 759 aaKnown RBP9.41□□□□□ -0.9
SKA2-201ENST00000330137 BCL9LQ86UU0 1499 aa9.4□□□□□ -0.9
SKA2-201ENST00000330137 PLEKHG3A1L390 1219 aa9.4□□□□□ -0.9
SKA2-201ENST00000330137 POLR3DP05423 398 aaPredicted RBP9.4□□□□□ -0.9
SKA2-201ENST00000330137 FMR1Q06787 632 aaKnown RBP eCLIP9.4□□□□□ -0.9
SKA2-201ENST00000330137 TTC39AQ5SRH9 613 aa9.4□□□□□ -0.9
SKA2-201ENST00000330137 CDCA2Q69YH5 1023 aaPredicted RBP9.4□□□□□ -0.9
SKA2-201ENST00000330137 TTLL7Q6ZT98 887 aa9.4□□□□□ -0.9
SKA2-201ENST00000330137 CCDC26Q8TAB7 109 aa9.4□□□□□ -0.9
SKA2-201ENST00000330137 TSGA10Q9BZW7 698 aa9.4□□□□□ -0.9
SKA2-201ENST00000330137 EPN1Q9Y6I3 576 aaPredicted RBP9.4□□□□□ -0.9
SKA2-201ENST00000330137 C4AP0C0L4 1744 aa9.4□□□□□ -0.9
SKA2-201ENST00000330137 C4BP0C0L5 1744 aa9.4□□□□□ -0.9
SKA2-201ENST00000330137 ROBO2Q9HCK4 1378 aa9.4□□□□□ -0.9
SKA2-201ENST00000330137 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.4□□□□□ -0.91
SKA2-201ENST00000330137 FOXO3O43524 673 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 NDUFA10O95299 355 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 CDC27P30260 824 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 CASP14P31944 242 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 INHBEP58166 350 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 GUCY1B3Q02153 619 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 NLRP14Q86W24 1093 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 KBTBD3Q8NAB2 608 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms