RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PHF20Q9BVI0 1012 aa19.86■□□□□ 0.77
COL9A1-201ENST00000320755 SRP68Q9UHB9 627 aaKnown RBP19.86■□□□□ 0.77
COL9A1-201ENST00000320755 DACH1Q9UI36 760 aa19.86■□□□□ 0.77
COL9A1-201ENST00000320755 LRP5O75197 1615 aa19.86■□□□□ 0.77
COL9A1-201ENST00000320755 FUT2Q10981 343 aa19.86■□□□□ 0.77
COL9A1-201ENST00000320755 PTF1AQ7RTS3 328 aa19.86■□□□□ 0.77
COL9A1-201ENST00000320755 ZNF579Q8NAF0 562 aaKnown RBP19.86■□□□□ 0.77
COL9A1-201ENST00000320755 FEZ1Q99689 392 aa19.86■□□□□ 0.77
COL9A1-201ENST00000320755 DESI2Q9BSY9 194 aa19.86■□□□□ 0.77
COL9A1-201ENST00000320755 PRPF3O43395 683 aaKnown RBP19.85■□□□□ 0.77
COL9A1-201ENST00000320755 PIK3AP1Q6ZUJ8 805 aa19.85■□□□□ 0.77
COL9A1-201ENST00000320755 SRBD1Q8N5C6 995 aaKnown RBP19.85■□□□□ 0.77
COL9A1-201ENST00000320755 ZNF397Q8NF99 534 aaPredicted RBP19.85■□□□□ 0.77
COL9A1-201ENST00000320755 CTCFLQ8NI51 663 aaPredicted RBP19.85■□□□□ 0.77
COL9A1-201ENST00000320755 ENOX1Q8TC92 643 aaKnown RBP19.85■□□□□ 0.77
COL9A1-201ENST00000320755 CDCA7Q9BWT1 371 aaPredicted RBP19.85■□□□□ 0.77
COL9A1-201ENST00000320755 PTGDRQ13258 359 aa19.85■□□□□ 0.77
COL9A1-201ENST00000320755 DHX8Q14562 1220 aaKnown RBP19.85■□□□□ 0.77
COL9A1-201ENST00000320755 SPECC1LQ69YQ0 1117 aa19.85■□□□□ 0.77
COL9A1-201ENST00000320755 BLZF1Q9H2G9 400 aa19.85■□□□□ 0.77
COL9A1-201ENST00000320755 BRMS1Q9HCU9 246 aa19.85■□□□□ 0.77
COL9A1-201ENST00000320755 OGFRQ9NZT2 677 aa19.85■□□□□ 0.77
COL9A1-201ENST00000320755 TEX33O43247 280 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 MCM7P33993 719 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 NLRP5P59047 1200 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 RPS8P62241 208 aaKnown RBP19.84■□□□□ 0.77
COL9A1-201ENST00000320755 KANK3Q6NY19 840 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 NSUN4Q96CB9 384 aaKnown RBP19.84■□□□□ 0.77
COL9A1-201ENST00000320755 PAGE5Q96GU1 130 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 MTA3Q9BTC8 594 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 PPP2R2CQ9Y2T4 447 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL9A1-201ENST00000320755 NID2Q14112 1375 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 ADAMTS3O15072 1205 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 CD44P16070 742 aaKnown RBP19.84■□□□□ 0.77
COL9A1-201ENST00000320755 CDC25AP30304 524 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 FAM98CQ17RN3 349 aaKnown RBP19.84■□□□□ 0.77
COL9A1-201ENST00000320755 REXO1L1PQ8IX06 675 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 PKNOX2Q96KN3 472 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 BRIP1Q9BX63 1249 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 DOCK2Q92608 1830 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 TSPY2A6NKD2 308 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 ZNF18P17022 549 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 TTC38Q5R3I4 469 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 TOGARAM2Q6ZUX3 1019 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 SLC51AQ86UW1 340 aa19.84■□□□□ 0.77
COL9A1-201ENST00000320755 COL14A1Q05707 1796 aaKnown RBP19.84■□□□□ 0.77
COL9A1-201ENST00000320755 FANCGO15287 622 aa19.83■□□□□ 0.77
COL9A1-201ENST00000320755 SF3B3Q15393 1217 aaKnown RBP19.83■□□□□ 0.77
COL9A1-201ENST00000320755 NT5DC1Q5TFE4 455 aa19.83■□□□□ 0.77
COL9A1-201ENST00000320755 TRIM65Q6PJ69 517 aa19.83■□□□□ 0.77
COL9A1-201ENST00000320755 TXNRD3Q86VQ6 643 aa19.83■□□□□ 0.77
COL9A1-201ENST00000320755 DCP1AQ9NPI6 582 aaPredicted RBP19.83■□□□□ 0.77
COL9A1-201ENST00000320755 HIBADHP31937 336 aaKnown RBP19.83■□□□□ 0.76
COL9A1-201ENST00000320755 PLCD1P51178 756 aa19.83■□□□□ 0.76
COL9A1-201ENST00000320755 RCAN1P53805 252 aa19.83■□□□□ 0.76
COL9A1-201ENST00000320755 GNG11P61952 73 aa19.83■□□□□ 0.76
COL9A1-201ENST00000320755 TMTC3Q6ZXV5 915 aa19.83■□□□□ 0.76
COL9A1-201ENST00000320755 TC2NQ8N9U0 490 aa19.83■□□□□ 0.76
COL9A1-201ENST00000320755 L2HGDHQ9H9P8 463 aa19.83■□□□□ 0.76
COL9A1-201ENST00000320755 DDX41Q9UJV9 622 aaKnown RBP19.83■□□□□ 0.76
COL9A1-201ENST00000320755 ARHGAP6O43182 974 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 CCP110O43303 1012 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 SLFN14P0C7P3 912 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 KARSQ15046 597 aaKnown RBP19.82■□□□□ 0.76
COL9A1-201ENST00000320755 NBPF5PQ86XG9 351 aaPredicted RBP19.82■□□□□ 0.76
COL9A1-201ENST00000320755 TMEM139Q8IV31 216 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 CCDC34Q96HJ3 373 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 MCM9Q9NXL9 1143 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 ZSCAN12O43309 604 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 KCNJ6P48051 423 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 MTF1Q14872 753 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 PPP2R5BQ15173 497 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 ARHGAP29Q52LW3 1261 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 CLEC4GQ6UXB4 293 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 MNS1Q8NEH6 495 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 CRNKL1Q9BZJ0 848 aaKnown RBP19.82■□□□□ 0.76
COL9A1-201ENST00000320755 RBM28Q9NW13 759 aaKnown RBP19.82■□□□□ 0.76
COL9A1-201ENST00000320755 ARAP2Q8WZ64 1704 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 USP17L8P0C7I0 530 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 SMARCC1Q92922 1105 aaPredicted RBP19.82■□□□□ 0.76
COL9A1-201ENST00000320755 NLRP3Q96P20 1036 aa19.82■□□□□ 0.76
COL9A1-201ENST00000320755 MYH6P13533 1939 aa19.81■□□□□ 0.76
COL9A1-201ENST00000320755 CARD6Q9BX69 1037 aa19.81■□□□□ 0.76
COL9A1-201ENST00000320755 MAPK8IP1Q9UQF2 711 aa19.81■□□□□ 0.76
COL9A1-201ENST00000320755 FAM182BQ5T319 152 aa19.81■□□□□ 0.76
COL9A1-201ENST00000320755 FBXO33Q7Z6M2 555 aa19.81■□□□□ 0.76
COL9A1-201ENST00000320755 GPKOWQ92917 476 aaPredicted RBP eCLIP19.81■□□□□ 0.76
COL9A1-201ENST00000320755 SETDB2Q96T68 719 aa19.81■□□□□ 0.76
COL9A1-201ENST00000320755 BCL9LQ86UU0 1499 aa19.81■□□□□ 0.76
COL9A1-201ENST00000320755 TIAM2Q8IVF5 1701 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 CCDC93Q567U6 631 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 ELOA2Q8IYF1 753 aaPredicted RBP19.8■□□□□ 0.76
COL9A1-201ENST00000320755 TRIML1Q8N9V2 468 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 RASGRP4Q8TDF6 673 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 WDR24Q96S15 920 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 CALM1P0DP23 149 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 CALM2P0DP24 149 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 CALM3P0DP25 149 aa19.8■□□□□ 0.76
COL9A1-201ENST00000320755 TBX2Q13207 712 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms