RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SGMS1Q86VZ5 419 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
VRK3-201ENST00000316763 NKX2-3Q8TAU0 364 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 IGDCC4Q8TDY8 1250 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 SDF4Q9BRK5 362 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
VRK3-201ENST00000316763 RNF41Q9H4P4 317 aaPredicted RBP16.37■□□□□ 0.21
VRK3-201ENST00000316763 TTF2Q9UNY4 1162 aaKnown RBP16.37■□□□□ 0.21
VRK3-201ENST00000316763 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
VRK3-201ENST00000316763 MYH2Q9UKX2 1941 aa16.36■□□□□ 0.21
VRK3-201ENST00000316763 BECN2A8MW95 431 aa16.36■□□□□ 0.21
VRK3-201ENST00000316763 RRP9O43818 475 aaKnown RBP16.36■□□□□ 0.21
VRK3-201ENST00000316763 CDC25BP30305 580 aa16.36■□□□□ 0.21
VRK3-201ENST00000316763 TRIM29Q14134 588 aa16.36■□□□□ 0.21
VRK3-201ENST00000316763 IQCB1Q15051 598 aa16.36■□□□□ 0.21
VRK3-201ENST00000316763 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
VRK3-201ENST00000316763 ANO1Q5XXA6 986 aa16.36■□□□□ 0.21
VRK3-201ENST00000316763 HHIPL2Q6UWX4 724 aa16.36■□□□□ 0.21
VRK3-201ENST00000316763 INCENPQ9NQS7 918 aa16.36■□□□□ 0.21
VRK3-201ENST00000316763 ARPP21Q9UBL0 812 aaPredicted RBP16.36■□□□□ 0.21
VRK3-201ENST00000316763 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 GOLGA8AA7E2F4 631 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 PCP11498 1178 aaKnown RBP16.35■□□□□ 0.21
VRK3-201ENST00000316763 GNL2Q13823 731 aaKnown RBP16.35■□□□□ 0.21
VRK3-201ENST00000316763 SART3Q15020 963 aaKnown RBP16.35■□□□□ 0.21
VRK3-201ENST00000316763 SARM1Q6SZW1 724 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 CEP57L1Q8IYX8 460 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 KIAA1524Q8TCG1 905 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 KCNF1Q9H3M0 494 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 LY9Q9HBG7 655 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 GJA3Q9Y6H8 435 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 CYP2D7A0A087X1C5 515 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 F8W031 263 aaPredicted RBP16.35■□□□□ 0.21
VRK3-201ENST00000316763 SMIM22K7EJ46 135 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 IFIT3O14879 490 aaKnown RBP16.35■□□□□ 0.21
VRK3-201ENST00000316763 HDLBPQ00341 1268 aaKnown RBP16.35■□□□□ 0.21
VRK3-201ENST00000316763 MICU3Q86XE3 530 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 KIAA0825Q8IV33 1275 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 JMYQ8N9B5 988 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 WASF1Q92558 559 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 GMLQ99445 158 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 SLC12A7Q9Y666 1083 aa16.35■□□□□ 0.21
VRK3-201ENST00000316763 A0A1B0GVL5 298 aa16.34■□□□□ 0.21
VRK3-201ENST00000316763 DYNC1I1O14576 645 aa16.34■□□□□ 0.21
VRK3-201ENST00000316763 USP5P45974 858 aa16.34■□□□□ 0.21
VRK3-201ENST00000316763 HSP90AA2PQ14568 343 aaPredicted RBP16.34■□□□□ 0.21
VRK3-201ENST00000316763 C11orf57Q6ZUT1 292 aaPredicted RBP16.34■□□□□ 0.21
VRK3-201ENST00000316763 TGFBRAP1Q8WUH2 860 aa16.34■□□□□ 0.21
VRK3-201ENST00000316763 MTA3Q9BTC8 594 aa16.34■□□□□ 0.21
VRK3-201ENST00000316763 ZSWIM5Q9P217 1185 aa16.34■□□□□ 0.21
VRK3-201ENST00000316763 MYO3BQ8WXR4 1341 aa16.34■□□□□ 0.21
VRK3-201ENST00000316763 KIF28PB7ZC32 967 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 PTGS1P23219 599 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 NDUFA8P51970 172 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 SSRP1Q08945 709 aaKnown RBP16.33■□□□□ 0.21
VRK3-201ENST00000316763 C12orf60Q5U649 245 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 KRT40Q6A162 431 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 CCDC186Q7Z3E2 898 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 AGBL3Q8NEM8 1001 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 TEKT1Q969V4 418 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 MCM9Q9NXL9 1143 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 CLIP2Q9UDT6 1046 aa16.33■□□□□ 0.21
VRK3-201ENST00000316763 STK36Q9NRP7 1315 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 ERICH2A1L162 156 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 DDNO94850 711 aaPredicted RBP16.33■□□□□ 0.2
VRK3-201ENST00000316763 USP17L8P0C7I0 530 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 CMA1P23946 247 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 CDC27P30260 824 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 SCNN1DP51172 638 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 SLC39A14Q15043 492 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 APOBEC3HQ6NTF7 200 aaKnown RBP16.33■□□□□ 0.2
VRK3-201ENST00000316763 TEX11Q8IYF3 940 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 GPC2Q8N158 579 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 TMTC2Q8N394 836 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
VRK3-201ENST00000316763 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
VRK3-201ENST00000316763 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
VRK3-201ENST00000316763 CRKP46108 304 aa16.32■□□□□ 0.2
VRK3-201ENST00000316763 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
VRK3-201ENST00000316763 MRFAP1L1Q96HT8 127 aa16.32■□□□□ 0.2
VRK3-201ENST00000316763 GJB4Q9NTQ9 266 aa16.32■□□□□ 0.2
VRK3-201ENST00000316763 PYCARDQ9ULZ3 195 aa16.32■□□□□ 0.2
VRK3-201ENST00000316763 BAZ2AQ9UIF9 1905 aaKnown RBP16.32■□□□□ 0.2
VRK3-201ENST00000316763 ROBO3Q96MS0 1386 aa16.32■□□□□ 0.2
VRK3-201ENST00000316763 FLT1P17948 1338 aa16.32■□□□□ 0.2
VRK3-201ENST00000316763 ORC4O43929 436 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 CYP2D6P10635 497 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 RXRAP19793 462 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 EVX2Q03828 476 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 NTRK3Q16288 839 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 PHKBQ93100 1093 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 TOMM22Q9NS69 142 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 SERPINA10Q9UK55 444 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 ECM29Q5VYK3 1845 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 PPP6R2O75170 966 aa16.31■□□□□ 0.2
VRK3-201ENST00000316763 RPS12P25398 132 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms