RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 BMP6P22004 513 aa21.46■■□□□ 1.03
HERPUD2-201ENST00000311350 METAP2P50579 478 aaKnown RBP eCLIP21.46■■□□□ 1.03
HERPUD2-201ENST00000311350 SCARF1Q14162 830 aa21.46■■□□□ 1.03
HERPUD2-201ENST00000311350 UBE3CQ15386 1083 aa21.46■■□□□ 1.03
HERPUD2-201ENST00000311350 CCDC102AQ96A19 550 aa21.46■■□□□ 1.03
HERPUD2-201ENST00000311350 RTCBQ9Y3I0 505 aaKnown RBP21.46■■□□□ 1.03
HERPUD2-201ENST00000311350 COL24A1Q17RW2 1714 aa21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 E2F4Q16254 413 aa21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 VPS37DQ86XT2 251 aa21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 ZBTB38Q8NAP3 1195 aaPredicted RBP21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 SOWAHDA6NJG2 315 aa21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 FOXN1O15353 648 aa21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 STX10O60499 249 aa21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 ALX1Q15699 326 aa21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 MAP3K14Q99558 947 aa21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 NBPF3Q9H094 633 aa21.45■■□□□ 1.02
HERPUD2-201ENST00000311350 NID2Q14112 1375 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 RPS6KA5O75582 802 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 VSNL1P62760 191 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 IFIT5Q13325 482 aaKnown RBP21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 KRT40Q6A162 431 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 CNNM3Q8NE01 707 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 HNRNPLLQ8WVV9 542 aaKnown RBP21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 GOLGA6L9A6NEM1 432 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 CORO7P57737 925 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 SHC4Q6S5L8 630 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 SGMS1Q86VZ5 419 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 CLIC6Q96NY7 704 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 RIPOR2Q9Y4F9 1068 aa21.44■■□□□ 1.02
HERPUD2-201ENST00000311350 TEX13AQ9BXU3 409 aaPredicted RBP21.43■■□□□ 1.02
HERPUD2-201ENST00000311350 RAB21Q9UL25 225 aa21.43■■□□□ 1.02
HERPUD2-201ENST00000311350 CASP8Q14790 479 aa21.43■■□□□ 1.02
HERPUD2-201ENST00000311350 APOA5Q6Q788 366 aa21.43■■□□□ 1.02
HERPUD2-201ENST00000311350 OLFM4Q6UX06 510 aa21.43■■□□□ 1.02
HERPUD2-201ENST00000311350 METTL16Q86W50 562 aaKnown RBP21.43■■□□□ 1.02
HERPUD2-201ENST00000311350 COL5A3P25940 1745 aaPredicted RBP21.42■■□□□ 1.02
HERPUD2-201ENST00000311350 USP5P45974 858 aa21.42■■□□□ 1.02
HERPUD2-201ENST00000311350 CRKLP46109 303 aaKnown RBP21.42■■□□□ 1.02
HERPUD2-201ENST00000311350 TRAPPC3LQ5T215 181 aa21.42■■□□□ 1.02
HERPUD2-201ENST00000311350 TRMT44Q8IYL2 757 aaKnown RBP21.42■■□□□ 1.02
HERPUD2-201ENST00000311350 GPATCH11Q8N954 259 aa21.42■■□□□ 1.02
HERPUD2-201ENST00000311350 LRRIQ3A6PVS8 624 aaPredicted RBP21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 RPS6KA4O75676 772 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 LONRF3Q496Y0 759 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 PCDHA5Q9Y5H7 936 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 DCAF8L1A6NGE4 600 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 ADRA2BP18089 450 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 ATP2B1P20020 1258 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 MCAMP43121 646 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 FMR1Q06787 632 aaKnown RBP eCLIP21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 NTRK3Q16288 839 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 SPECC1LQ69YQ0 1117 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 CYB5R4Q7L1T6 521 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 TBC1D10CQ8IV04 446 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 AIFM3Q96NN9 605 aa21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 HOOK1Q9UJC3 728 aaKnown RBP21.41■■□□□ 1.02
HERPUD2-201ENST00000311350 ABL1P00519 1130 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 LIFRP42702 1097 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 CCDC102BQ68D86 513 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 RAD9BQ6WBX8 426 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 KIF6Q6ZMV9 814 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 TEX2Q8IWB9 1127 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 DNAJC10Q8IXB1 793 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 MSANTD4Q8NCY6 345 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 WASF1Q92558 559 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 FAM204AQ9H8W3 233 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 CICQ96RK0 1608 aaPredicted RBP21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 AKAP11Q9UKA4 1901 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 TRIM29Q14134 588 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 BRMS1Q9HCU9 246 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 CDC23Q9UJX2 597 aa21.4■■□□□ 1.02
HERPUD2-201ENST00000311350 ZBTB43O43298 467 aa21.39■■□□□ 1.02
HERPUD2-201ENST00000311350 EIF3JO75822 258 aaKnown RBP21.39■■□□□ 1.02
HERPUD2-201ENST00000311350 METTL24Q5JXM2 366 aa21.39■■□□□ 1.02
HERPUD2-201ENST00000311350 SPECC1Q5M775 1068 aa21.39■■□□□ 1.02
HERPUD2-201ENST00000311350 ZNF569Q5MCW4 686 aa21.39■■□□□ 1.02
HERPUD2-201ENST00000311350 IGDCC4Q8TDY8 1250 aa21.39■■□□□ 1.02
HERPUD2-201ENST00000311350 IARSP41252 1262 aaKnown RBP21.39■■□□□ 1.01
HERPUD2-201ENST00000311350 CPLX3Q8WVH0 158 aa21.39■■□□□ 1.01
HERPUD2-201ENST00000311350 PPM1EQ8WY54 764 aa21.39■■□□□ 1.01
HERPUD2-201ENST00000311350 ARHGEF1Q92888 912 aaKnown RBP21.39■■□□□ 1.01
HERPUD2-201ENST00000311350 NCAPGQ9BPX3 1015 aa21.39■■□□□ 1.01
HERPUD2-201ENST00000311350 UQCRFS1P1P0C7P4 283 aa21.38■■□□□ 1.01
HERPUD2-201ENST00000311350 ARID4AP29374 1257 aaPredicted RBP21.38■■□□□ 1.01
HERPUD2-201ENST00000311350 VGLL2Q8N8G2 317 aa21.38■■□□□ 1.01
HERPUD2-201ENST00000311350 SECISBP2LQ93073 1101 aaKnown RBP21.38■■□□□ 1.01
HERPUD2-201ENST00000311350 MTA3Q9BTC8 594 aa21.38■■□□□ 1.01
HERPUD2-201ENST00000311350 MKRN1Q9UHC7 482 aaKnown RBP21.38■■□□□ 1.01
HERPUD2-201ENST00000311350 NFE2L3Q9Y4A8 694 aa21.38■■□□□ 1.01
HERPUD2-201ENST00000311350 ERLIN1O75477 346 aa21.37■■□□□ 1.01
HERPUD2-201ENST00000311350 CCDC175P0C221 793 aa21.37■■□□□ 1.01
HERPUD2-201ENST00000311350 KIF4BQ2VIQ3 1234 aa21.37■■□□□ 1.01
HERPUD2-201ENST00000311350 HSP90AB3PQ58FF7 597 aa21.37■■□□□ 1.01
HERPUD2-201ENST00000311350 SLC9C2Q5TAH2 1124 aa21.37■■□□□ 1.01
HERPUD2-201ENST00000311350 INTS5Q6P9B9 1019 aaKnown RBP21.37■■□□□ 1.01
HERPUD2-201ENST00000311350 KRI1Q8N9T8 703 aaKnown RBP21.37■■□□□ 1.01
HERPUD2-201ENST00000311350 LY9Q9HBG7 655 aa21.37■■□□□ 1.01
HERPUD2-201ENST00000311350 SAMSN1Q9NSI8 373 aaKnown RBP21.37■■□□□ 1.01
HERPUD2-201ENST00000311350 KCNH3Q9ULD8 1083 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms