RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 CARMIL3Q8ND23 1372 aa18.27■□□□□ 0.52
BRD3-201ENST00000303407 ADKP55263 362 aaKnown RBP18.27■□□□□ 0.52
BRD3-201ENST00000303407 FERMT1Q9BQL6 677 aa18.27■□□□□ 0.52
BRD3-201ENST00000303407 STMN4Q9H169 189 aaPredicted RBP18.27■□□□□ 0.52
BRD3-201ENST00000303407 BACH1O14867 736 aa18.27■□□□□ 0.51
BRD3-201ENST00000303407 KRT9P35527 623 aa18.27■□□□□ 0.51
BRD3-201ENST00000303407 BLIDQ8IZY5 108 aa18.27■□□□□ 0.51
BRD3-201ENST00000303407 REXO1Q8N1G1 1221 aaKnown RBP18.27■□□□□ 0.51
BRD3-201ENST00000303407 TBC1D22AQ8WUA7 517 aa18.27■□□□□ 0.51
BRD3-201ENST00000303407 ATRIPQ8WXE1 791 aa18.27■□□□□ 0.51
BRD3-201ENST00000303407 CEP152O94986 1710 aa18.27■□□□□ 0.51
BRD3-201ENST00000303407 ERBB3P21860 1342 aa18.27■□□□□ 0.51
BRD3-201ENST00000303407 ZYXQ15942 572 aaKnown RBP18.27■□□□□ 0.51
BRD3-201ENST00000303407 SELENOSQ9BQE4 189 aa18.27■□□□□ 0.51
BRD3-201ENST00000303407 NSRP1Q9H0G5 558 aaKnown RBP18.27■□□□□ 0.51
BRD3-201ENST00000303407 ADGRB3O60242 1522 aa18.27■□□□□ 0.51
BRD3-201ENST00000303407 CETN3O15182 167 aa18.26■□□□□ 0.51
BRD3-201ENST00000303407 PAIP2Q9BPZ3 127 aaKnown RBP18.26■□□□□ 0.51
BRD3-201ENST00000303407 CRKLP46109 303 aaKnown RBP18.26■□□□□ 0.51
BRD3-201ENST00000303407 KRBA2Q6ZNG9 492 aa18.26■□□□□ 0.51
BRD3-201ENST00000303407 DDAH1O94760 285 aa18.26■□□□□ 0.51
BRD3-201ENST00000303407 KIF4AO95239 1232 aa18.26■□□□□ 0.51
BRD3-201ENST00000303407 USP21Q9UK80 565 aa18.26■□□□□ 0.51
BRD3-201ENST00000303407 HOMER2Q9NSB8 354 aa18.26■□□□□ 0.51
BRD3-201ENST00000303407 ZNF500O60304 480 aaPredicted RBP18.25■□□□□ 0.51
BRD3-201ENST00000303407 ERCC3P19447 782 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 DNAJC21Q5F1R6 531 aaKnown RBP18.25■□□□□ 0.51
BRD3-201ENST00000303407 NSUN7Q8NE18 718 aaKnown RBP18.25■□□□□ 0.51
BRD3-201ENST00000303407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.25■□□□□ 0.51
BRD3-201ENST00000303407 B4DLN1 442 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 KRT5P13647 590 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 ZMYND15Q9H091 742 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 TNFAIP3P21580 790 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 HERC4Q5GLZ8 1057 aaPredicted RBP18.25■□□□□ 0.51
BRD3-201ENST00000303407 SLF1Q9BQI6 1058 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 CCDC77Q9BR77 488 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 RTEL1Q9NZ71 1219 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 BTBD18B2RXH4 712 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 SEL1L2Q5TEA6 688 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 DPH6Q7L8W6 267 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 DNM3Q9UQ16 869 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 SMIM23A6NLE4 172 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 PTPN12Q05209 780 aaKnown RBP18.25■□□□□ 0.51
BRD3-201ENST00000303407 MFSD14BQ5SR56 506 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 GPIHBP1Q8IV16 184 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 NELFCDQ8IXH7 590 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 NOX5Q96PH1 765 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
BRD3-201ENST00000303407 IGSF3O75054 1194 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 USP40Q9NVE5 1235 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 FRMPD2Q68DX3 1309 aaPredicted RBP18.24■□□□□ 0.51
BRD3-201ENST00000303407 LARGE1O95461 756 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 RAD51AP2Q09MP3 1159 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 PPP1R7Q15435 360 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 H0YIN7 160 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 DDX39AO00148 427 aaKnown RBP18.24■□□□□ 0.51
BRD3-201ENST00000303407 SCG2P13521 617 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 GTF2IP78347 998 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 NBPF14Q5TI25 921 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 GPKOWQ92917 476 aaPredicted RBP eCLIP18.24■□□□□ 0.51
BRD3-201ENST00000303407 CCDC169A6NNP5 214 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 KCNJ18B7U540 433 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 SASH1O94885 1247 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 POLD1P28340 1107 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 MORC3Q14149 939 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 KCNJ12Q14500 433 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 FAM76AQ8TAV0 307 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 WDR17Q8IZU2 1322 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
BRD3-201ENST00000303407 LRMPQ12912 555 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 ARHGEF35A5YM69 484 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 SLC9C1Q4G0N8 1177 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 CFAP58Q5T655 872 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 FBXO18Q8NFZ0 1043 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 UBLCP1Q8WVY7 318 aaPredicted RBP18.23■□□□□ 0.51
BRD3-201ENST00000303407 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 RBM6P78332 1123 aaKnown RBP18.23■□□□□ 0.51
BRD3-201ENST00000303407 LRRC8AQ8IWT6 810 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 LOC102724428A0A0B4J2F2 783 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 ADD2P35612 726 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 SIK1P57059 783 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 C8orf74Q6P047 294 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 PAXIP1Q6ZW49 1069 aaPredicted RBP18.23■□□□□ 0.51
BRD3-201ENST00000303407 PNMA1Q8ND90 353 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 ZNF827Q17R98 1081 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 ATG3Q9NT62 314 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 MTUS1Q9ULD2 1270 aa18.23■□□□□ 0.51
BRD3-201ENST00000303407 ATP10DQ9P241 1426 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 FMNL1O95466 1100 aaPredicted RBP18.22■□□□□ 0.51
BRD3-201ENST00000303407 SMTNP53814 917 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 CCDC26Q8TAB7 109 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 MTRF1LQ9UGC7 380 aaKnown RBP18.22■□□□□ 0.51
BRD3-201ENST00000303407 LRRIQ1Q96JM4 1722 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 RNASE9P60153 205 aaKnown RBP18.22■□□□□ 0.51
BRD3-201ENST00000303407 INF2Q27J81 1249 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 MAEAQ7L5Y9 396 aa18.22■□□□□ 0.51
BRD3-201ENST00000303407 KIFAP3Q92845 792 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms