RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SPTY2D1Q68D10 685 aaPredicted RBP25.18■■□□□ 1.62
TPM4-201ENST00000300933 USP17L1Q7RTZ2 530 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 WDR66Q8TBY9 1149 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 FEZ1Q99689 392 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 WNT7AO00755 349 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 ADAMTS3O15072 1205 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 PLA2G4DQ86XP0 818 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 OGFRQ9NZT2 677 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 PDILTQ8N807 584 aa25.17■■□□□ 1.62
TPM4-201ENST00000300933 PPP6R2O75170 966 aa25.17■■□□□ 1.62
TPM4-201ENST00000300933 USP49Q70CQ1 688 aa25.17■■□□□ 1.62
TPM4-201ENST00000300933 CEP57L1Q8IYX8 460 aa25.17■■□□□ 1.62
TPM4-201ENST00000300933 NID2Q14112 1375 aa25.17■■□□□ 1.62
TPM4-201ENST00000300933 PDE4BQ07343 736 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 ARID5BQ14865 1188 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 CCDC144BQ3MJ40 725 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 MTA3Q9BTC8 594 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 RNF26Q9BY78 433 aaPredicted RBP25.16■■□□□ 1.62
TPM4-201ENST00000300933 ARPP21Q9UBL0 812 aaPredicted RBP25.16■■□□□ 1.62
TPM4-201ENST00000300933 CLIP2Q9UDT6 1046 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 GGA1Q9UJY5 639 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 PDS5AQ29RF7 1337 aaKnown RBP25.16■■□□□ 1.62
TPM4-201ENST00000300933 SMTNL1A8MU46 457 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 ADRA2BP18089 450 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 TXNRD1Q16881 649 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 TPD52L1Q16890 204 aaPredicted RBP25.16■■□□□ 1.62
TPM4-201ENST00000300933 CRY2Q49AN0 593 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 RCSD1Q6JBY9 416 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 JMYQ8N9B5 988 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 IL17RBQ9NRM6 502 aa25.16■■□□□ 1.62
TPM4-201ENST00000300933 RASGRP2Q7LDG7 609 aa25.15■■□□□ 1.62
TPM4-201ENST00000300933 FOXP1Q9H334 677 aaPredicted RBP25.15■■□□□ 1.62
TPM4-201ENST00000300933 MKNK2Q9HBH9 465 aa25.15■■□□□ 1.62
TPM4-201ENST00000300933 ORC4O43929 436 aa25.15■■□□□ 1.62
TPM4-201ENST00000300933 RESP18Q5W5W9 173 aa25.15■■□□□ 1.62
TPM4-201ENST00000300933 CCDC112Q8NEF3 446 aa25.15■■□□□ 1.62
TPM4-201ENST00000300933 KCNH3Q9ULD8 1083 aa25.15■■□□□ 1.62
TPM4-201ENST00000300933 HPSEQ9Y251 543 aa25.15■■□□□ 1.62
TPM4-201ENST00000300933 C12orf60Q5U649 245 aa25.14■■□□□ 1.62
TPM4-201ENST00000300933 KRI1Q8N9T8 703 aaKnown RBP25.14■■□□□ 1.62
TPM4-201ENST00000300933 RBM17Q96I25 401 aaKnown RBP25.14■■□□□ 1.62
TPM4-201ENST00000300933 MKRN1Q9UHC7 482 aaKnown RBP25.14■■□□□ 1.62
TPM4-201ENST00000300933 F8W031 263 aaPredicted RBP25.14■■□□□ 1.61
TPM4-201ENST00000300933 POLRMTO00411 1230 aaKnown RBP25.14■■□□□ 1.61
TPM4-201ENST00000300933 TMTC3Q6ZXV5 915 aa25.14■■□□□ 1.61
TPM4-201ENST00000300933 CTCFLQ8NI51 663 aaPredicted RBP25.14■■□□□ 1.61
TPM4-201ENST00000300933 MFSD14BQ5SR56 506 aa25.13■■□□□ 1.61
TPM4-201ENST00000300933 FOXP4Q8IVH2 680 aaPredicted RBP25.13■■□□□ 1.61
TPM4-201ENST00000300933 GRAMD1CQ8IYS0 662 aa25.13■■□□□ 1.61
TPM4-201ENST00000300933 STAG2Q8N3U4 1231 aa25.13■■□□□ 1.61
TPM4-201ENST00000300933 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.13■■□□□ 1.61
TPM4-201ENST00000300933 MYH6P13533 1939 aa25.13■■□□□ 1.61
TPM4-201ENST00000300933 BTDP43251 543 aa25.13■■□□□ 1.61
TPM4-201ENST00000300933 TBC1D16Q8TBP0 767 aa25.13■■□□□ 1.61
TPM4-201ENST00000300933 CACTINQ8WUQ7 758 aaKnown RBP25.13■■□□□ 1.61
TPM4-201ENST00000300933 SBK1Q52WX2 424 aa25.12■■□□□ 1.61
TPM4-201ENST00000300933 CGNQ9P2M7 1197 aaKnown RBP25.12■■□□□ 1.61
TPM4-201ENST00000300933 PRPF3O43395 683 aaKnown RBP25.12■■□□□ 1.61
TPM4-201ENST00000300933 CUTAO60888 179 aa25.12■■□□□ 1.61
TPM4-201ENST00000300933 RILPL1Q5EBL4 403 aa25.12■■□□□ 1.61
TPM4-201ENST00000300933 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.12■■□□□ 1.61
TPM4-201ENST00000300933 FBXO2Q9UK22 296 aaPredicted RBP25.12■■□□□ 1.61
TPM4-201ENST00000300933 V9GYY5 206 aaPredicted RBP25.12■■□□□ 1.61
TPM4-201ENST00000300933 CCDC88AQ3V6T2 1871 aa25.12■■□□□ 1.61
TPM4-201ENST00000300933 FILIP1Q7Z7B0 1213 aa25.11■■□□□ 1.61
TPM4-201ENST00000300933 METTL16Q86W50 562 aaKnown RBP25.11■■□□□ 1.61
TPM4-201ENST00000300933 CNNM3Q8NE01 707 aa25.11■■□□□ 1.61
TPM4-201ENST00000300933 PHF20Q9BVI0 1012 aa25.11■■□□□ 1.61
TPM4-201ENST00000300933 MXD3Q9BW11 206 aa25.11■■□□□ 1.61
TPM4-201ENST00000300933 CPVLQ9H3G5 476 aa25.11■■□□□ 1.61
TPM4-201ENST00000300933 STX8Q9UNK0 236 aa25.11■■□□□ 1.61
TPM4-201ENST00000300933 POLR2DO15514 142 aaKnown RBP25.11■■□□□ 1.61
TPM4-201ENST00000300933 CAVIN2O95810 425 aa25.11■■□□□ 1.61
TPM4-201ENST00000300933 ZNF827Q17R98 1081 aa25.11■■□□□ 1.61
TPM4-201ENST00000300933 RTFDC1Q9BY42 306 aaPredicted RBP25.11■■□□□ 1.61
TPM4-201ENST00000300933 UBR3Q6ZT12 1888 aa25.11■■□□□ 1.61
TPM4-201ENST00000300933 BAG3O95817 575 aa25.1■■□□□ 1.61
TPM4-201ENST00000300933 RCAN1P53805 252 aa25.1■■□□□ 1.61
TPM4-201ENST00000300933 ZNF174Q15697 407 aa25.1■■□□□ 1.61
TPM4-201ENST00000300933 CNTNAP5Q8WYK1 1306 aa25.1■■□□□ 1.61
TPM4-201ENST00000300933 GTF2IP78347 998 aa25.1■■□□□ 1.61
TPM4-201ENST00000300933 MSL1Q68DK7 614 aa25.1■■□□□ 1.61
TPM4-201ENST00000300933 GPKOWQ92917 476 aaPredicted RBP eCLIP25.1■■□□□ 1.611e-6■■□□□ 12.4
TPM4-201ENST00000300933 NOL10Q9BSC4 688 aaKnown RBP25.1■■□□□ 1.61
TPM4-201ENST00000300933 KRT2P35908 639 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 SLC27A3Q5K4L6 730 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 NAT10Q9H0A0 1025 aaKnown RBP25.09■■□□□ 1.61
TPM4-201ENST00000300933 CSRNP2Q9H175 543 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 KAT14Q9H8E8 782 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 GOLGA8HP0CJ92 632 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 PCP11498 1178 aaKnown RBP25.09■■□□□ 1.61
TPM4-201ENST00000300933 ATP2B4P23634 1241 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 HSP90AA4PQ58FG1 418 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 RBM28Q9NW13 759 aaKnown RBP25.09■■□□□ 1.61
TPM4-201ENST00000300933 DDAH1O94760 285 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 TSPY3P0CV98 308 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 TSPY8P0CW00 308 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 XBP1P17861 261 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 LMOD1P29536 600 aaPredicted RBP25.09■■□□□ 1.61
TPM4-201ENST00000300933 NLRP12P59046 1061 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms