RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 AGTPBP1Q9UPW5 1226 aa14.4□□□□□ -0.1
HMGB2-201ENST00000296503 DDX60LQ5H9U9 1706 aaKnown RBP14.39□□□□□ -0.11
HMGB2-201ENST00000296503 SLC3A2P08195 630 aaKnown RBP14.39□□□□□ -0.11
HMGB2-201ENST00000296503 GSPT1P15170 499 aaKnown RBP14.39□□□□□ -0.11
HMGB2-201ENST00000296503 GUCY1A2P33402 732 aa14.39□□□□□ -0.11
HMGB2-201ENST00000296503 ZYXQ15942 572 aaKnown RBP14.39□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L2Q6R6M4 530 aa14.39□□□□□ -0.11
HMGB2-201ENST00000296503 TMEM179Q6ZVK1 233 aa14.39□□□□□ -0.11
HMGB2-201ENST00000296503 CTU1Q7Z7A3 348 aaKnown RBP14.39□□□□□ -0.11
HMGB2-201ENST00000296503 ZNF444Q8N0Y2 327 aaPredicted RBP14.39□□□□□ -0.11
HMGB2-201ENST00000296503 ZNF287Q9HBT7 754 aa14.39□□□□□ -0.11
HMGB2-201ENST00000296503 CPA4Q9UI42 421 aa14.39□□□□□ -0.11
HMGB2-201ENST00000296503 SLC45A1Q9Y2W3 748 aa14.39□□□□□ -0.11
HMGB2-201ENST00000296503 OSBPP22059 807 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 ZNF589Q86UQ0 364 aaPredicted RBP14.38□□□□□ -0.11
HMGB2-201ENST00000296503 ACER1Q8TDN7 264 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 ERO1AQ96HE7 468 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 CCDC171Q6TFL3 1326 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 HSPD1P10809 573 aaKnown RBP14.38□□□□□ -0.11
HMGB2-201ENST00000296503 USP14P54578 494 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 ATP2B2Q01814 1243 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 PDE4BQ07343 736 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 PPARAQ07869 468 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 CD99L2Q8TCZ2 262 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 SMCR8Q8TEV9 937 aaPredicted RBP14.38□□□□□ -0.11
HMGB2-201ENST00000296503 MCOLN1Q9GZU1 580 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 EMILIN3Q9NT22 766 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 PNMA3Q9UL41 463 aa14.38□□□□□ -0.11
HMGB2-201ENST00000296503 PRDM1O75626 825 aa14.37□□□□□ -0.11
HMGB2-201ENST00000296503 ECM2O94769 699 aaPredicted RBP14.37□□□□□ -0.11
HMGB2-201ENST00000296503 FGAP02671 866 aa14.37□□□□□ -0.11
HMGB2-201ENST00000296503 KIF22Q14807 665 aa14.37□□□□□ -0.11
HMGB2-201ENST00000296503 ALX1Q15699 326 aa14.37□□□□□ -0.11
HMGB2-201ENST00000296503 C17orf99Q6UX52 265 aa14.37□□□□□ -0.11
HMGB2-201ENST00000296503 FOXP2O15409 715 aa14.36□□□□□ -0.11
HMGB2-201ENST00000296503 RASA1P20936 1047 aa14.36□□□□□ -0.11
HMGB2-201ENST00000296503 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
HMGB2-201ENST00000296503 ARHGEF6Q15052 776 aa14.36□□□□□ -0.11
HMGB2-201ENST00000296503 KIAA1683Q9H0B3 1180 aa14.36□□□□□ -0.11
HMGB2-201ENST00000296503 KANSL2Q9H9L4 492 aa14.36□□□□□ -0.11
HMGB2-201ENST00000296503 ARHGEF10LQ9HCE6 1279 aa14.36□□□□□ -0.11
HMGB2-201ENST00000296503 PTPRFP10586 1907 aa14.36□□□□□ -0.11
HMGB2-201ENST00000296503 MYH8P13535 1937 aa14.36□□□□□ -0.11
HMGB2-201ENST00000296503 IRX3P78415 501 aaPredicted RBP14.35□□□□□ -0.11
HMGB2-201ENST00000296503 ICA1Q05084 483 aa14.35□□□□□ -0.11
HMGB2-201ENST00000296503 ASCC2Q9H1I8 757 aaPredicted RBP14.35□□□□□ -0.11
HMGB2-201ENST00000296503 EFCC1Q9HA90 598 aa14.35□□□□□ -0.11
HMGB2-201ENST00000296503 TRIM17Q9Y577 477 aa14.35□□□□□ -0.11
HMGB2-201ENST00000296503 A0A1W2PRG0 241 aa14.35□□□□□ -0.11
HMGB2-201ENST00000296503 SKAP1Q86WV1 359 aa14.35□□□□□ -0.11
HMGB2-201ENST00000296503 CLEC10AQ8IUN9 316 aa14.35□□□□□ -0.11
HMGB2-201ENST00000296503 RUFY2Q8WXA3 655 aa14.35□□□□□ -0.11
HMGB2-201ENST00000296503 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
HMGB2-201ENST00000296503 EEF2P13639 858 aaKnown RBP14.34□□□□□ -0.11
HMGB2-201ENST00000296503 HOXA7P31268 230 aaPredicted RBP14.34□□□□□ -0.11
HMGB2-201ENST00000296503 PKN2Q16513 984 aaKnown RBP14.34□□□□□ -0.11
HMGB2-201ENST00000296503 P2RX7Q99572 595 aaKnown RBP14.34□□□□□ -0.11
HMGB2-201ENST00000296503 SH2D4AQ9H788 454 aa14.34□□□□□ -0.11
HMGB2-201ENST00000296503 TOMM22Q9NS69 142 aa14.34□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L15C9J2P7 530 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L13C9JLJ4 530 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L11C9JVI0 530 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L18D6R9N7 530 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L22D6RA61 530 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L17D6RBQ6 530 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L19D6RCP7 530 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L20D6RJB6 530 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 TSPY3P0CV98 308 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 TSPY8P0CW00 308 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 CHMLP26374 656 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 LACTBP83111 547 aaPredicted RBP14.33□□□□□ -0.11
HMGB2-201ENST00000296503 USP17L24Q0WX57 530 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 FAM47AQ5JRC9 791 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 OTOP1Q7RTM1 612 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 SIAH1Q8IUQ4 282 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 C12orf42Q96LP6 360 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 INCENPQ9NQS7 918 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 TMX2Q9Y320 296 aa14.33□□□□□ -0.11
HMGB2-201ENST00000296503 ADGRA2Q96PE1 1338 aa14.33□□□□□ -0.12
HMGB2-201ENST00000296503 RAD21O60216 631 aa14.33□□□□□ -0.12
HMGB2-201ENST00000296503 FMNL1O95466 1100 aaPredicted RBP14.33□□□□□ -0.12
HMGB2-201ENST00000296503 BCRP11274 1271 aa14.33□□□□□ -0.12
HMGB2-201ENST00000296503 GCLCP48506 637 aaPredicted RBP14.33□□□□□ -0.12
HMGB2-201ENST00000296503 HAND2P61296 217 aa14.33□□□□□ -0.12
HMGB2-201ENST00000296503 TFAP4Q01664 338 aa14.33□□□□□ -0.12
HMGB2-201ENST00000296503 ANKRD13CQ8N6S4 541 aa14.33□□□□□ -0.12
HMGB2-201ENST00000296503 ABHD8Q96I13 439 aa14.33□□□□□ -0.12
HMGB2-201ENST00000296503 ANAPC4Q9UJX5 808 aa14.33□□□□□ -0.12
HMGB2-201ENST00000296503 RANBP6O60518 1105 aaKnown RBP14.32□□□□□ -0.12
HMGB2-201ENST00000296503 VCAM1P19320 739 aa14.32□□□□□ -0.12
HMGB2-201ENST00000296503 PSMC4P43686 418 aa14.32□□□□□ -0.12
HMGB2-201ENST00000296503 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.32□□□□□ -0.12
HMGB2-201ENST00000296503 ARHGAP39Q9C0H5 1083 aa14.32□□□□□ -0.12
HMGB2-201ENST00000296503 RPAP3Q9H6T3 665 aaPredicted RBP14.32□□□□□ -0.12
HMGB2-201ENST00000296503 CLIP2Q9UDT6 1046 aa14.32□□□□□ -0.12
HMGB2-201ENST00000296503 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 ZNF213O14771 459 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 CAPN15O75808 1086 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 HERVK_113P62684 666 aa14.31□□□□□ -0.12
HMGB2-201ENST00000296503 RRP12Q5JTH9 1297 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms