RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 IMPACTQ9P2X3 320 aa19.24■□□□□ 0.67
CDCP1-201ENST00000296129 MTMR6Q9Y217 621 aa19.24■□□□□ 0.67
CDCP1-201ENST00000296129 STRN3Q13033 797 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 PKP1Q13835 747 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 FANCBQ8NB91 859 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 STMN4Q9H169 189 aaPredicted RBP19.23■□□□□ 0.67
CDCP1-201ENST00000296129 PDE8BO95263 885 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 EVCP57679 992 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 MAPK8IP2Q13387 824 aaPredicted RBP19.23■□□□□ 0.67
CDCP1-201ENST00000296129 BTDP43251 543 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 GPIHBP1Q8IV16 184 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 USP28Q96RU2 1077 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 ZNF408Q9H9D4 720 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.23■□□□□ 0.67
CDCP1-201ENST00000296129 VAV2P52735 878 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 DOK7Q18PE1 504 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 NUP58Q9BVL2 599 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 NSRP1Q9H0G5 558 aaKnown RBP19.23■□□□□ 0.67
CDCP1-201ENST00000296129 SCNN1DP51172 638 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 LONRF3Q496Y0 759 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 NSMFQ6X4W1 530 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 CCDC25Q86WR0 208 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 FNBP4Q8N3X1 1017 aaPredicted RBP19.23■□□□□ 0.67
CDCP1-201ENST00000296129 GIMAP7Q8NHV1 300 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 LRRC45Q96CN5 670 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 ZBTB1Q9Y2K1 713 aa19.23■□□□□ 0.67
CDCP1-201ENST00000296129 VPS18Q9P253 973 aa19.22■□□□□ 0.67
CDCP1-201ENST00000296129 M0R2C6 588 aa19.22■□□□□ 0.67
CDCP1-201ENST00000296129 NR1I2O75469 434 aa19.22■□□□□ 0.67
CDCP1-201ENST00000296129 GCNT3O95395 438 aa19.22■□□□□ 0.67
CDCP1-201ENST00000296129 ZNF853P0CG23 659 aa19.22■□□□□ 0.67
CDCP1-201ENST00000296129 BLIDQ8IZY5 108 aa19.22■□□□□ 0.67
CDCP1-201ENST00000296129 TTC16Q8NEE8 873 aa19.22■□□□□ 0.67
CDCP1-201ENST00000296129 ATRIPQ8WXE1 791 aa19.22■□□□□ 0.67
CDCP1-201ENST00000296129 MTUS1Q9ULD2 1270 aa19.22■□□□□ 0.67
CDCP1-201ENST00000296129 MTX1Q13505 466 aa19.21■□□□□ 0.67
CDCP1-201ENST00000296129 MRPL44Q9H9J2 332 aaKnown RBP19.21■□□□□ 0.67
CDCP1-201ENST00000296129 ADCK5Q3MIX3 580 aa19.21■□□□□ 0.67
CDCP1-201ENST00000296129 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.21■□□□□ 0.67
CDCP1-201ENST00000296129 SCRN1Q12765 414 aa19.21■□□□□ 0.67
CDCP1-201ENST00000296129 GOLGA8HP0CJ92 632 aa19.21■□□□□ 0.67
CDCP1-201ENST00000296129 LRRC47Q8N1G4 583 aaKnown RBP19.21■□□□□ 0.67
CDCP1-201ENST00000296129 ZHX1Q9UKY1 873 aaPredicted RBP19.21■□□□□ 0.67
CDCP1-201ENST00000296129 WDR17Q8IZU2 1322 aa19.21■□□□□ 0.67
CDCP1-201ENST00000296129 NOP56O00567 594 aaKnown RBP19.21■□□□□ 0.67
CDCP1-201ENST00000296129 UBE3CQ15386 1083 aa19.21■□□□□ 0.67
CDCP1-201ENST00000296129 PNMA1Q8ND90 353 aa19.21■□□□□ 0.67
CDCP1-201ENST00000296129 MAP4K1Q92918 833 aa19.21■□□□□ 0.67
CDCP1-201ENST00000296129 HOOK2Q96ED9 719 aa19.21■□□□□ 0.67
CDCP1-201ENST00000296129 ZNF804BA4D1E1 1349 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 PDIA3P30101 505 aaKnown RBP19.2■□□□□ 0.66
CDCP1-201ENST00000296129 KRT9P35527 623 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 GPKOWQ92917 476 aaPredicted RBP eCLIP19.2■□□□□ 0.66
CDCP1-201ENST00000296129 IQGAP3Q86VI3 1631 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 DKC1O60832 514 aaKnown RBP eCLIP19.2■□□□□ 0.66
CDCP1-201ENST00000296129 PPM1FP49593 454 aaPredicted RBP19.2■□□□□ 0.66
CDCP1-201ENST00000296129 MTRF1LQ9UGC7 380 aaKnown RBP19.2■□□□□ 0.66
CDCP1-201ENST00000296129 RSPH14Q9UHP6 348 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 PLA2R1Q13018 1463 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 ANKARQ7Z5J8 1434 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 SPOPO43791 374 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 CALRP27797 417 aaKnown RBP19.2■□□□□ 0.66
CDCP1-201ENST00000296129 IL6STP40189 918 aaPredicted RBP19.2■□□□□ 0.66
CDCP1-201ENST00000296129 ZMYM1Q5SVZ6 1142 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 GPR108Q9NPR9 543 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 APBB1IPQ7Z5R6 666 aaPredicted RBP19.2■□□□□ 0.66
CDCP1-201ENST00000296129 OTUD6BQ8N6M0 293 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 C2CD5Q86YS7 1000 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 ERO1AQ96HE7 468 aa19.2■□□□□ 0.66
CDCP1-201ENST00000296129 ERBB3P21860 1342 aa19.19■□□□□ 0.66
CDCP1-201ENST00000296129 RASEFQ8IZ41 740 aa19.19■□□□□ 0.66
CDCP1-201ENST00000296129 OSBPL3Q9H4L5 887 aa19.19■□□□□ 0.66
CDCP1-201ENST00000296129 RNASE9P60153 205 aaKnown RBP19.19■□□□□ 0.66
CDCP1-201ENST00000296129 ZNF589Q86UQ0 364 aaPredicted RBP19.19■□□□□ 0.66
CDCP1-201ENST00000296129 SREK1Q8WXA9 508 aaKnown RBP19.19■□□□□ 0.66
CDCP1-201ENST00000296129 SECISBP2LQ93073 1101 aaKnown RBP19.19■□□□□ 0.66
CDCP1-201ENST00000296129 DNAJC21Q5F1R6 531 aaKnown RBP19.19■□□□□ 0.66
CDCP1-201ENST00000296129 DDAH1O94760 285 aa19.19■□□□□ 0.66
CDCP1-201ENST00000296129 ATP8A2Q9NTI2 1148 aa19.19■□□□□ 0.66
CDCP1-201ENST00000296129 CDC42BPAQ5VT25 1732 aa19.19■□□□□ 0.66
CDCP1-201ENST00000296129 PABPN1LA6NDY0 278 aaKnown RBP19.19■□□□□ 0.66
CDCP1-201ENST00000296129 MAP3K9P80192 1104 aa19.19■□□□□ 0.66
CDCP1-201ENST00000296129 UBLCP1Q8WVY7 318 aaPredicted RBP19.19■□□□□ 0.66
CDCP1-201ENST00000296129 MAK16Q9BXY0 300 aaKnown RBP19.19■□□□□ 0.66
CDCP1-201ENST00000296129 INF2Q27J81 1249 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 SLC9C1Q4G0N8 1177 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 TPH2Q8IWU9 490 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 KIAA1468Q9P260 1216 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 CLTCL1P53675 1640 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 TLDC2A0PJX2 215 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 STX10O60499 249 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 FERP16591 822 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 TECP42680 631 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 CALCOCO2Q13137 446 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 TRPC3Q13507 836 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 TMTC1Q8IUR5 882 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 KIAA0825Q8IV33 1275 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 XPO4Q9C0E2 1151 aaKnown RBP19.18■□□□□ 0.66
CDCP1-201ENST00000296129 MAP3K4Q9Y6R4 1608 aa19.18■□□□□ 0.66
CDCP1-201ENST00000296129 TCP10L2B9ZVM9 353 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms