RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 RGS2P41220 211 aa16.99■□□□□ 0.31
TPM1-202ENST00000288398 WDR78Q5VTH9 848 aa16.99■□□□□ 0.31
TPM1-202ENST00000288398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.99■□□□□ 0.31
TPM1-202ENST00000288398 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
TPM1-202ENST00000288398 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.99■□□□□ 0.31
TPM1-202ENST00000288398 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
TPM1-202ENST00000288398 MYO5AQ9Y4I1 1855 aaKnown RBP16.99■□□□□ 0.31
TPM1-202ENST00000288398 CEP290O15078 2479 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 ZNF532Q9HCE3 1301 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 MYH1P12882 1939 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 FXR1P51114 621 aaKnown RBP eCLIP16.98■□□□□ 0.31
TPM1-202ENST00000288398 PLEKHH3Q7Z736 793 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 ANKLE1Q8NAG6 615 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 PAWRQ96IZ0 340 aaKnown RBP16.98■□□□□ 0.31
TPM1-202ENST00000288398 RIOK1Q9BRS2 568 aaKnown RBP16.98■□□□□ 0.31
TPM1-202ENST00000288398 KIAA1683Q9H0B3 1180 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 CRISPLD2Q9H0B8 497 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 TXNRD2Q9NNW7 524 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 RBPJLQ9UBG7 517 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 GJD2Q9UKL4 321 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 RABGAP1Q9Y3P9 1069 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 IVNS1ABPQ9Y6Y0 642 aa16.98■□□□□ 0.31
TPM1-202ENST00000288398 XRCC5P13010 732 aaKnown RBP16.97■□□□□ 0.31
TPM1-202ENST00000288398 PRKAR2AP13861 404 aaKnown RBP16.97■□□□□ 0.31
TPM1-202ENST00000288398 GPR142Q7Z601 462 aa16.97■□□□□ 0.31
TPM1-202ENST00000288398 TRIB2Q92519 343 aa16.97■□□□□ 0.31
TPM1-202ENST00000288398 C12orf42Q96LP6 360 aa16.97■□□□□ 0.31
TPM1-202ENST00000288398 RCAN3Q9UKA8 241 aa16.97■□□□□ 0.31
TPM1-202ENST00000288398 VCAM1P19320 739 aa16.96■□□□□ 0.31
TPM1-202ENST00000288398 PLCD1P51178 756 aa16.96■□□□□ 0.31
TPM1-202ENST00000288398 APBA2Q99767 749 aa16.96■□□□□ 0.31
TPM1-202ENST00000288398 NBPF3Q9H094 633 aa16.96■□□□□ 0.31
TPM1-202ENST00000288398 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.31
TPM1-202ENST00000288398 PAG1Q9NWQ8 432 aa16.96■□□□□ 0.31
TPM1-202ENST00000288398 PEX10O60683 326 aa16.95■□□□□ 0.3
TPM1-202ENST00000288398 SHMT1P34896 483 aa16.95■□□□□ 0.3
TPM1-202ENST00000288398 PORCNQ9H237 461 aa16.95■□□□□ 0.3
TPM1-202ENST00000288398 BOLA2Q9H3K6 86 aa16.95■□□□□ 0.3
TPM1-202ENST00000288398 SWAP70Q9UH65 585 aa16.95■□□□□ 0.3
TPM1-202ENST00000288398 TRIM32Q13049 653 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 Q3C1V9 767 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 ZSCAN25Q6NSZ9 544 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 CATSPERGQ6ZRH7 1159 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 LCORLQ8N3X6 602 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 ACER1Q8TDN7 264 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 SDR42E1Q8WUS8 393 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 TANGO6Q9C0B7 1094 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 C11orf49Q9H6J7 331 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 RPAP3Q9H6T3 665 aaPredicted RBP16.94■□□□□ 0.3
TPM1-202ENST00000288398 SH2D4AQ9H788 454 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 ARMT1Q9H993 441 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 RBM27Q9P2N5 1060 aaKnown RBP16.94■□□□□ 0.3
TPM1-202ENST00000288398 NAV1Q8NEY1 1877 aa16.94■□□□□ 0.3
TPM1-202ENST00000288398 DOCK3Q8IZD9 2030 aa16.93■□□□□ 0.3
TPM1-202ENST00000288398 MBD4O95243 580 aa16.93■□□□□ 0.3
TPM1-202ENST00000288398 SEPT2Q15019 361 aa16.93■□□□□ 0.3
TPM1-202ENST00000288398 MFSD14CQ5VZR4 134 aa16.93■□□□□ 0.3
TPM1-202ENST00000288398 TMEM179Q6ZVK1 233 aa16.93■□□□□ 0.3
TPM1-202ENST00000288398 DIS3LQ8TF46 1054 aaKnown RBP16.93■□□□□ 0.3
TPM1-202ENST00000288398 LRRCC1Q9C099 1032 aa16.93■□□□□ 0.3
TPM1-202ENST00000288398 ARHGEF10LQ9HCE6 1279 aa16.93■□□□□ 0.3
TPM1-202ENST00000288398 DCP1AQ9NPI6 582 aaPredicted RBP16.93■□□□□ 0.3
TPM1-202ENST00000288398 ATP8A2Q9NTI2 1148 aa16.93■□□□□ 0.3
TPM1-202ENST00000288398 ATP5JP18859 108 aa16.92■□□□□ 0.3
TPM1-202ENST00000288398 MAP2K5Q13163 448 aa16.92■□□□□ 0.3
TPM1-202ENST00000288398 MORN1Q5T089 497 aa16.92■□□□□ 0.3
TPM1-202ENST00000288398 SIRT2Q8IXJ6 389 aa16.92■□□□□ 0.3
TPM1-202ENST00000288398 C7orf61Q8IZ16 206 aa16.92■□□□□ 0.3
TPM1-202ENST00000288398 EDC3Q96F86 508 aaKnown RBP16.92■□□□□ 0.3
TPM1-202ENST00000288398 GPATCH3Q96I76 525 aa16.92■□□□□ 0.3
TPM1-202ENST00000288398 HOXC10Q9NYD6 342 aa16.92■□□□□ 0.3
TPM1-202ENST00000288398 TCRBV5S4A2TA0A5A2 114 aa16.91■□□□□ 0.3
TPM1-202ENST00000288398 SLC15A5A6NIM6 579 aa16.91■□□□□ 0.3
TPM1-202ENST00000288398 ADD2P35612 726 aa16.91■□□□□ 0.3
TPM1-202ENST00000288398 ATP2B2Q01814 1243 aa16.91■□□□□ 0.3
TPM1-202ENST00000288398 GABPAQ06546 454 aa16.91■□□□□ 0.3
TPM1-202ENST00000288398 CACNB2Q08289 660 aaPredicted RBP16.91■□□□□ 0.3
TPM1-202ENST00000288398 MAP3K21Q5TCX8 1036 aa16.91■□□□□ 0.3
TPM1-202ENST00000288398 HAUS7Q99871 368 aa16.91■□□□□ 0.3
TPM1-202ENST00000288398 OGDHLQ9ULD0 1010 aa16.91■□□□□ 0.3
TPM1-202ENST00000288398 A0A1W2PPC1 479 aa16.9■□□□□ 0.3
TPM1-202ENST00000288398 SPDYE16A6NNV3 312 aaPredicted RBP16.9■□□□□ 0.3
TPM1-202ENST00000288398 COG2Q14746 738 aa16.9■□□□□ 0.3
TPM1-202ENST00000288398 CCL14Q16627 93 aa16.9■□□□□ 0.3
TPM1-202ENST00000288398 LBX2Q6XYB7 198 aa16.9■□□□□ 0.3
TPM1-202ENST00000288398 TRIOBPQ9H2D6 2365 aa16.9■□□□□ 0.3
TPM1-202ENST00000288398 CNMDO75829 334 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 CYP2D6P10635 497 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 PTPREP23469 700 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 CNGA1P29973 690 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 GUCY1A2P33402 732 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 ICA1Q05084 483 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 UBE3CQ15386 1083 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
TPM1-202ENST00000288398 DPP9Q86TI2 863 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 LPAR1Q92633 364 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 USP6NLQ92738 828 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 CCDC17Q96LX7 622 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 SLC5A4Q9NY91 659 aa16.89■□□□□ 0.29
TPM1-202ENST00000288398 SLC4A4Q9Y6R1 1079 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms