RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 TMEM232C9JQI7 657 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 H0YHG0 523 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 GADD45BO75293 160 aaPredicted RBP15.41■□□□□ 0.06
NPC1-201ENST00000269228 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
NPC1-201ENST00000269228 CNNM4Q6P4Q7 775 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 BLIDQ8IZY5 108 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 CCDC42Q96M95 316 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 TTC12Q9H892 705 aaPredicted RBP15.41■□□□□ 0.06
NPC1-201ENST00000269228 NOD1Q9Y239 953 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 FRMD4BQ9Y2L6 1034 aa15.41■□□□□ 0.06
NPC1-201ENST00000269228 PDIA3P30101 505 aaKnown RBP15.4■□□□□ 0.06
NPC1-201ENST00000269228 DALRD3Q5D0E6 543 aaKnown RBP15.4■□□□□ 0.06
NPC1-201ENST00000269228 CC2D2BQ6DHV5 1058 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 PDCL2Q8N4E4 241 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 CLSTN2Q9H4D0 955 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 DNM3Q9UQ16 869 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 PTPRMP28827 1452 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 HERC4Q5GLZ8 1057 aaPredicted RBP15.4■□□□□ 0.06
NPC1-201ENST00000269228 PIH1D3Q9NQM4 214 aaKnown RBP15.4■□□□□ 0.06
NPC1-201ENST00000269228 ADAMTS13Q76LX8 1427 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 PIK3C2BO00750 1634 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 LAMC1P11047 1609 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 C21orf2O43822 256 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 SCG2P13521 617 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 NAA15Q9BXJ9 866 aaKnown RBP15.4■□□□□ 0.06
NPC1-201ENST00000269228 DKC1O60832 514 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPC1-201ENST00000269228 HSPA1LP34931 641 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 GADL1Q6ZQY3 521 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 CABP7Q86V35 215 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 IFT74Q96LB3 600 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 CCDC113Q9H0I3 377 aa15.4■□□□□ 0.06
NPC1-201ENST00000269228 PCP11498 1178 aaKnown RBP15.39■□□□□ 0.05
NPC1-201ENST00000269228 MAP9Q49MG5 647 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 NOSTRINQ8IVI9 506 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 SPICE1Q8N0Z3 855 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 AZI2Q9H6S1 392 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 KIDINS220Q9ULH0 1771 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 FLOT1O75955 427 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 BRD1O95696 1058 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 LUC7L2Q9Y383 392 aaKnown RBP15.39■□□□□ 0.05
NPC1-201ENST00000269228 NEXMIFQ5QGS0 1516 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 DDAH1O94760 285 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 BIRC3Q13489 604 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 RAPGEF1Q13905 1077 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 TXNRD1Q16881 649 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 INF2Q27J81 1249 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 FBXO11Q86XK2 927 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 CCDC17Q96LX7 622 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 HOOK3Q86VS8 718 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 TBC1D7Q9P0N9 293 aa15.39■□□□□ 0.05
NPC1-201ENST00000269228 PPP1R2P41236 205 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 FNBP1Q96RU3 617 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 NOC4LQ9BVI4 516 aaKnown RBP15.38■□□□□ 0.05
NPC1-201ENST00000269228 BTBD18B2RXH4 712 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 EPB41P11171 864 aaKnown RBP15.38■□□□□ 0.05
NPC1-201ENST00000269228 MECOMQ03112 1051 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 VPS16Q9H269 839 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 MED14O60244 1454 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 LRRC7Q96NW7 1537 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 TESPA1A2RU30 521 aaPredicted RBP15.38■□□□□ 0.05
NPC1-201ENST00000269228 NBPF26B4DH59 902 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 NBPF10Q6P3W6 841 aaKnown RBP15.38■□□□□ 0.05
NPC1-201ENST00000269228 NBPF15Q8N660 670 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 DNAI1Q9UI46 699 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 SERPINB13Q9UIV8 391 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 GDF11O95390 407 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 IFFO1Q0D2I5 559 aa15.38■□□□□ 0.05
NPC1-201ENST00000269228 CWC15Q9P013 229 aaKnown RBP15.38■□□□□ 0.05
NPC1-201ENST00000269228 GAS7O60861 476 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 ADRA2BP18089 450 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 MCM3P25205 808 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 TBC1D8BQ0IIM8 1120 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 NLRX1Q86UT6 975 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 CSGALNACT2Q8N6G5 542 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 CELF1Q92879 486 aaKnown RBP15.37■□□□□ 0.05
NPC1-201ENST00000269228 CYP2D7A0A087X1C5 515 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 USP17L8P0C7I0 530 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 MCAMP43121 646 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 SCRN1Q12765 414 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 TPH2Q8IWU9 490 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 MRPL11Q9Y3B7 192 aaKnown RBP15.37■□□□□ 0.05
NPC1-201ENST00000269228 CCDC175P0C221 793 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 MAP3K9P80192 1104 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 PRR16Q569H4 304 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 USP17L3A6NCW0 530 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 USP17L4A6NCW7 530 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 ZBTB7AO95365 584 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 SMIM5Q71RC9 77 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 USP17L1Q7RTZ2 530 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 USP28Q96RU2 1077 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 COA1Q9GZY4 146 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 TAOK3Q9H2K8 898 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 RNF216Q9NWF9 866 aaPredicted RBP15.37■□□□□ 0.05
NPC1-201ENST00000269228 SWAP70Q9UH65 585 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 MINPP1Q9UNW1 487 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 STK24Q9Y6E0 443 aa15.37■□□□□ 0.05
NPC1-201ENST00000269228 GJC1P36383 396 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 KIF5AQ12840 1032 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 APOA5Q6Q788 366 aa15.36■□□□□ 0.05
NPC1-201ENST00000269228 RTKN2Q8IZC4 609 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms