RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 STK24Q9Y6E0 443 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 MSH6P52701 1360 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 NDC80O14777 642 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 CDC25BP30305 580 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 DTHD1Q6ZMT9 781 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 ARHGAP22Q7Z5H3 698 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 APLFQ8IW19 511 aaPredicted RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 TRIM42Q8IWZ5 723 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 ZNF653Q96CK0 615 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 C6orf50Q9HD87 102 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 NAPAP54920 295 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 PPP2R5BQ15173 497 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 HSP90AA4PQ58FG1 418 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 CNNM4Q6P4Q7 775 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 TSC22D4Q9Y3Q8 395 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 PTPDC1A2A3K4 754 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 OPHN1O60890 802 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 HOXB7P09629 217 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 APOBRQ0VD83 1088 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 PLCB1Q9NQ66 1216 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 HELLSQ9NRZ9 838 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 DENND4BO75064 1496 aaPredicted RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 CC2D1AQ6P1N0 951 aaPredicted RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 SYCE1Q8N0S2 351 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 TESK2Q96S53 571 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 MIS12Q9H081 205 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 SYNRGQ9UMZ2 1314 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 MAP3K5Q99683 1374 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 VIRMAQ69YN4 1812 aaKnown RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 EPB41P11171 864 aaKnown RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 SEL1L2Q5TEA6 688 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 TAOK1Q7L7X3 1001 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 FCHSD1Q86WN1 690 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 ARHGAP24Q8N264 748 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 C17orf50Q8WW18 174 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 PALMDQ9NP74 551 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.31□□□□□ -1.4
VCAN-201ENST00000265077 ICE1Q9Y2F5 2266 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 ZNF189O75820 626 aaPredicted RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 FBXW10Q5XX13 1052 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 AATFQ9NY61 560 aaKnown RBP eCLIP6.31□□□□□ -1.4
VCAN-201ENST00000265077 PPP1R9AQ9ULJ8 1098 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 STK38LQ9Y2H1 464 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 ACTN4O43707 911 aaKnown RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 PLCG2P16885 1265 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 GSTA5Q7RTV2 222 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 LRRC8AQ8IWT6 810 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 C8orf58Q8NAV2 365 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 ZC4H2Q9NQZ6 224 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 PTPRKQ15262 1439 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 PSDA5PKW4 1024 aaPredicted RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 PTCD1O75127 700 aaKnown RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 ANGEL1Q9UNK9 670 aaKnown RBP6.31□□□□□ -1.4
VCAN-201ENST00000265077 SKIP12755 728 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 RGL1Q9NZL6 768 aa6.31□□□□□ -1.4
VCAN-201ENST00000265077 ARHGAP18Q8N392 663 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 UBL4BQ8N7F7 174 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 BICD1Q96G01 975 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 ZNF131P52739 623 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 FANCCQ00597 558 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 P3H4Q92791 437 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 TCEANC2Q96MN5 208 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 STX8Q9UNK0 236 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 FLT4P35916 1363 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 SLC44A4Q53GD3 710 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 NPATQ14207 1427 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 RNF113AO15541 343 aaKnown RBP6.3□□□□□ -1.4
VCAN-201ENST00000265077 ICA1Q05084 483 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 SWT1Q5T5J6 900 aaKnown RBP6.3□□□□□ -1.4
VCAN-201ENST00000265077 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.3□□□□□ -1.4
VCAN-201ENST00000265077 SLC4A4Q9Y6R1 1079 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 ZNF518AQ6AHZ1 1483 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 hCG_2014768A0A024R1R8 64 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 RINLQ6ZS11 566 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 MIEF2Q96C03 454 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 GLT8D2Q9H1C3 349 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 ANKRD65E5RJM6 399 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 PSEN1P49768 467 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 PACS2Q86VP3 889 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 WDR75Q8IWA0 830 aaKnown RBP6.3□□□□□ -1.4
VCAN-201ENST00000265077 IMPG2Q9BZV3 1241 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 A2MP01023 1474 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 ZBTB7BO15156 539 aaPredicted RBP6.3□□□□□ -1.4
VCAN-201ENST00000265077 AP1G2O75843 785 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 DRP2Q13474 957 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 XAGE3Q8WTP9 111 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 MCUR1Q96AQ8 359 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 OSBPL1AQ9BXW6 950 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 TRIM35Q9UPQ4 493 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 ADGRL2O95490 1459 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 CFAP74Q9C0B2 1584 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 ZNF202O95125 648 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 NLRP12P59046 1061 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 ST5P78524 1137 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 AKAP4Q5JQC9 854 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 CCDC62Q6P9F0 684 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 LRRC43Q8N309 656 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 CCDC197Q8NCU1 140 aa6.3□□□□□ -1.4
VCAN-201ENST00000265077 PLEKHG2Q9H7P9 1386 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms