RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CHGBP05060 677 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 PDE4BQ07343 736 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 MB21D2Q8IYB1 491 aaPredicted RBP14.82□□□□□ -0.04
NUP54-201ENST00000264883 CRACR2AQ9BSW2 395 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 CAPS2Q9BXY5 557 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 RABEP2Q9H5N1 569 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 HOOK1Q9UJC3 728 aaKnown RBP14.82□□□□□ -0.04
NUP54-201ENST00000264883 EYA2O00167 538 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 EIF3HO15372 352 aaKnown RBP eCLIP14.82□□□□□ -0.04
NUP54-201ENST00000264883 FNTAP49354 379 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 RALYLQ86SE5 291 aaKnown RBP14.82□□□□□ -0.04
NUP54-201ENST00000264883 CDC5LQ99459 802 aaKnown RBP14.82□□□□□ -0.04
NUP54-201ENST00000264883 EHD4Q9H223 541 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 C4AP0C0L4 1744 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 C4BP0C0L5 1744 aa14.82□□□□□ -0.04
NUP54-201ENST00000264883 BCL9LQ86UU0 1499 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 CHUKO15111 745 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 NF2P35240 595 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 RASGRP2Q7LDG7 609 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 ZKSCAN4Q969J2 545 aaPredicted RBP14.81□□□□□ -0.04
NUP54-201ENST00000264883 CD248Q9HCU0 757 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 MYO6Q9UM54 1294 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 KIAA0754O94854 1291 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 MARCKSP29966 332 aaPredicted RBP14.81□□□□□ -0.04
NUP54-201ENST00000264883 USP14P54578 494 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 NCAPH2Q6IBW4 605 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 BARGINQ6ZT62 677 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 AMOTL1Q8IY63 956 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 N4BP2L2Q92802 583 aaPredicted RBP14.81□□□□□ -0.04
NUP54-201ENST00000264883 VEZTQ9HBM0 779 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 CWC25Q9NXE8 425 aaPredicted RBP14.81□□□□□ -0.04
NUP54-201ENST00000264883 HPS5Q9UPZ3 1129 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 NFE2L3Q9Y4A8 694 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 SAMM50Q9Y512 469 aa14.81□□□□□ -0.04
NUP54-201ENST00000264883 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.8□□□□□ -0.04
NUP54-201ENST00000264883 M0R2C6 588 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 FSBPO95073 299 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 ZNF18P17022 549 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 GNGT1P63211 74 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 MEX3CQ5U5Q3 659 aaKnown RBP14.8□□□□□ -0.04
NUP54-201ENST00000264883 OTUD6BQ8N6M0 293 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 XAGE2Q96GT9 111 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 NGLY1Q96IV0 654 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 C8orf37Q96NL8 207 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 TMOD3Q9NYL9 352 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 DACH1Q9UI36 760 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 TTF2Q9UNY4 1162 aaKnown RBP14.8□□□□□ -0.04
NUP54-201ENST00000264883 ZMYM6O95789 1325 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 ATXN2Q99700 1313 aaKnown RBP14.8□□□□□ -0.04
NUP54-201ENST00000264883 NUP188Q5SRE5 1749 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 AGPSO00116 658 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 CALRP27797 417 aaKnown RBP14.8□□□□□ -0.04
NUP54-201ENST00000264883 CDC27P30260 824 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 NR1I3Q14994 352 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 PREPLQ4J6C6 727 aaPredicted RBP14.8□□□□□ -0.04
NUP54-201ENST00000264883 B4GALNT4Q76KP1 1039 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 PPFIBP1Q86W92 1011 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 TBC1D22AQ8WUA7 517 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 PIGBQ92521 554 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 GDAP1L1Q96MZ0 367 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 TEX13AQ9BXU3 409 aaPredicted RBP14.8□□□□□ -0.04
NUP54-201ENST00000264883 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.8□□□□□ -0.04
NUP54-201ENST00000264883 GRIN2DO15399 1336 aa14.8□□□□□ -0.04
NUP54-201ENST00000264883 BCL9O00512 1426 aa14.79□□□□□ -0.04
NUP54-201ENST00000264883 TJP1Q07157 1748 aa14.79□□□□□ -0.04
NUP54-201ENST00000264883 RESP18Q5W5W9 173 aa14.79□□□□□ -0.04
NUP54-201ENST00000264883 CHST3Q7LGC8 479 aa14.79□□□□□ -0.04
NUP54-201ENST00000264883 METTL16Q86W50 562 aaKnown RBP14.79□□□□□ -0.04
NUP54-201ENST00000264883 FNBP4Q8N3X1 1017 aaPredicted RBP14.79□□□□□ -0.04
NUP54-201ENST00000264883 APPBP2Q92624 585 aa14.79□□□□□ -0.04
NUP54-201ENST00000264883 OSBP2Q969R2 916 aa14.79□□□□□ -0.04
NUP54-201ENST00000264883 PCDHA5Q9Y5H7 936 aa14.79□□□□□ -0.04
NUP54-201ENST00000264883 BMP6P22004 513 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 RBL2Q08999 1139 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 CPLX3Q8WVH0 158 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 FAXDC2Q96IV6 333 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 GOLGA6BA6NDN3 693 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 ATP5J2-PTCD1G3V325 749 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 PTCD1O75127 700 aaKnown RBP14.78□□□□□ -0.04
NUP54-201ENST00000264883 GCFC2P16383 781 aaKnown RBP14.78□□□□□ -0.04
NUP54-201ENST00000264883 TIMM10P62072 90 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 AMPD2Q01433 879 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 CCDC102BQ68D86 513 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 SHC4Q6S5L8 630 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 FOXP4Q8IVH2 680 aaPredicted RBP14.78□□□□□ -0.04
NUP54-201ENST00000264883 CEP126Q9P2H0 1117 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 MYO1AQ9UBC5 1043 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 DOT1LQ8TEK3 1739 aa14.78□□□□□ -0.04
NUP54-201ENST00000264883 KIF28PB7ZC32 967 aa14.77□□□□□ -0.04
NUP54-201ENST00000264883 ZNF213O14771 459 aa14.77□□□□□ -0.04
NUP54-201ENST00000264883 KIF3CO14782 793 aa14.77□□□□□ -0.04
NUP54-201ENST00000264883 NEBLO76041 1014 aa14.77□□□□□ -0.04
NUP54-201ENST00000264883 FMR1Q06787 632 aaKnown RBP eCLIP14.77□□□□□ -0.04
NUP54-201ENST00000264883 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.77□□□□□ -0.04
NUP54-201ENST00000264883 SGSM3Q96HU1 749 aa14.77□□□□□ -0.04
NUP54-201ENST00000264883 ODF2LQ9ULJ1 636 aa14.77□□□□□ -0.04
NUP54-201ENST00000264883 NBPF26B4DH59 902 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 MEFVO15553 781 aaPredicted RBP14.77□□□□□ -0.05
NUP54-201ENST00000264883 ABL1P00519 1130 aa14.77□□□□□ -0.05
NUP54-201ENST00000264883 FGAP02671 866 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms