RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CWC15Q9P013 229 aaKnown RBP18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 PSDA5PKW4 1024 aaPredicted RBP18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 RBL2Q08999 1139 aa18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 TPTE2Q6XPS3 522 aa18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 TRMT1LQ7Z2T5 733 aaKnown RBP18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 VSTM4Q8IW00 320 aa18.31■□□□□ 0.52
PDZRN3-201ENST00000263666 MAP3K15Q6ZN16 1313 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 MYO1BO43795 1136 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 ASIC1P78348 528 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 MRPS25P82663 173 aaKnown RBP18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 FMR1Q06787 632 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 IQUBQ8NA54 791 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 BBXQ8WY36 941 aaPredicted RBP18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 RSPH14Q9UHP6 348 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 PLEKHA8P1O95397 391 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 TAF3Q5VWG9 929 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 SRRTQ9BXP5 876 aaKnown RBP18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 LOC102724428A0A0B4J2F2 783 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 F8W031 263 aaPredicted RBP18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 PNMA6AP0CW24 399 aaPredicted RBP18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 SIK1P57059 783 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 NBPF11Q86T75 865 aa18.3■□□□□ 0.52
PDZRN3-201ENST00000263666 NMT2O60551 498 aa18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 RBM5P52756 815 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 RNASE9P60153 205 aaKnown RBP18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 QTRT2Q9H974 415 aaKnown RBP18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 GOLGA8HP0CJ92 632 aa18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 EIF6P56537 245 aaKnown RBP18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 CCDC96Q2M329 555 aa18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 LETM2Q2VYF4 491 aa18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 CCDC122Q5T0U0 273 aa18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 TRAPPC3LQ5T215 181 aa18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 MMRN2Q9H8L6 949 aa18.29■□□□□ 0.52
PDZRN3-201ENST00000263666 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 SPA17Q15506 151 aa18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 OSBPL5Q9H0X9 879 aaPredicted RBP18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 TERF2Q15554 542 aa18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 RBM43Q6ZSC3 357 aaKnown RBP18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 LY9Q9HBG7 655 aa18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 SOS2Q07890 1332 aaPredicted RBP18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 ANKRD65E5RJM6 399 aa18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 MMP1P03956 469 aa18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 IKBKBO14920 756 aa18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 CACNA2D4Q7Z3S7 1137 aa18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 SLC35F6Q8N357 371 aa18.28■□□□□ 0.52
PDZRN3-201ENST00000263666 SMIM22K7EJ46 135 aa18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 AKR1B10O60218 316 aa18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 ZNF622Q969S3 477 aaKnown RBP eCLIP18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 CRNKL1Q9BZJ0 848 aaKnown RBP18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 CPVLQ9H3G5 476 aa18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 PRDM4Q9UKN5 801 aa18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 CHRNDQ07001 517 aa18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 NELFBQ8WX92 580 aa18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 UBA5Q9GZZ9 404 aa18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 LUC7L2Q9Y383 392 aaKnown RBP18.27■□□□□ 0.52
PDZRN3-201ENST00000263666 ARHGAP23Q9P227 1491 aa18.27■□□□□ 0.51
PDZRN3-201ENST00000263666 PPP6R2O75170 966 aa18.27■□□□□ 0.51
PDZRN3-201ENST00000263666 TSPY3P0CV98 308 aa18.27■□□□□ 0.51
PDZRN3-201ENST00000263666 TSPY8P0CW00 308 aa18.27■□□□□ 0.51
PDZRN3-201ENST00000263666 PARD6BQ9BYG5 372 aa18.27■□□□□ 0.51
PDZRN3-201ENST00000263666 NCAPD2Q15021 1401 aa18.27■□□□□ 0.51
PDZRN3-201ENST00000263666 MPHOSPH10O00566 681 aaKnown RBP18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 TCP11L1Q9NUJ3 509 aa18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 PTPROQ16827 1216 aa18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 RESP18Q5W5W9 173 aa18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 NYAP1Q6ZVC0 841 aa18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 RGS22Q8NE09 1264 aa18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 CTAGE1Q96RT6 745 aa18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 FAM107BQ9H098 131 aa18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 SLIT1O75093 1534 aa18.26■□□□□ 0.51
PDZRN3-201ENST00000263666 FMNL1O95466 1100 aaPredicted RBP18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 TFRCP02786 760 aaKnown RBP18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 RAD51AP2Q09MP3 1159 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 C3P01024 1663 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 KDM6AO15550 1401 aaPredicted RBP18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 NAPAP54920 295 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 PDE11AQ9HCR9 933 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 GNAT2P19087 354 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 PAK1Q13153 545 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 UTP14CQ5TAP6 766 aaKnown RBP18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 SUSD4Q5VX71 490 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 CTR9Q6PD62 1173 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 DTHD1Q6ZMT9 781 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 CNGA4Q8IV77 575 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 CRACR2BQ8N4Y2 399 aaPredicted RBP18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 IFNAR1P17181 557 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 ANKRD13CQ8N6S4 541 aa18.25■□□□□ 0.51
PDZRN3-201ENST00000263666 KIF5BP33176 963 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 EXOC1Q9NV70 894 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 PSMA7O14818 248 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 ST5P78524 1137 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 DYMQ7RTS9 669 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 ISCA1Q9BUE6 129 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 SEC63Q9UGP8 760 aaKnown RBP18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 EFCAB8A8MWE9 144 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 PLCD1P51178 756 aa18.24■□□□□ 0.51
PDZRN3-201ENST00000263666 CASP7P55210 303 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms