RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 ICA1Q05084 483 aa17.64■□□□□ 0.41
SHANK3-201ENST00000262795 KARSQ15046 597 aaKnown RBP17.64■□□□□ 0.41
SHANK3-201ENST00000262795 GUCA1BQ9UMX6 200 aa17.64■□□□□ 0.41
SHANK3-201ENST00000262795 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
SHANK3-201ENST00000262795 TNNI3KQ59H18 835 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 LIN9Q5TKA1 542 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 ZNF653Q96CK0 615 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 FPGT-TNNI3KV9GXZ4 949 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.63■□□□□ 0.41
SHANK3-201ENST00000262795 TAB3Q8N5C8 712 aaPredicted RBP17.63■□□□□ 0.41
SHANK3-201ENST00000262795 LBHD1Q9BQE6 289 aaPredicted RBP17.63■□□□□ 0.41
SHANK3-201ENST00000262795 SPTLC2O15270 562 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 POLR2MP0CAP2 368 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 ELF1P32519 619 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 SND1Q7KZF4 910 aaKnown RBP eCLIP17.63■□□□□ 0.41
SHANK3-201ENST00000262795 KRT33BQ14525 404 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 CEP57Q86XR8 500 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 PIM2Q9P1W9 311 aa17.63■□□□□ 0.41
SHANK3-201ENST00000262795 P4HA1P13674 534 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 ITIH3Q06033 890 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 KCTD1Q719H9 257 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 GPBP1L1Q9HC44 474 aaPredicted RBP17.62■□□□□ 0.41
SHANK3-201ENST00000262795 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 PLEKHH1Q9ULM0 1364 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 SAT1P21673 171 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 NCOA5Q9HCD5 579 aaKnown RBP17.62■□□□□ 0.41
SHANK3-201ENST00000262795 ANAPC4Q9UJX5 808 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 M0R2C6 588 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 CCDC93Q567U6 631 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 CTAGE1Q96RT6 745 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 NOC4LQ9BVI4 516 aaKnown RBP17.62■□□□□ 0.41
SHANK3-201ENST00000262795 DDX21Q9NR30 783 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHANK3-201ENST00000262795 HAUS2Q9NVX0 235 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 RSPH14Q9UHP6 348 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 HSPA1LP34931 641 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
SHANK3-201ENST00000262795 PRXQ9BXM0 1461 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 SNW1Q13573 536 aaKnown RBP17.62■□□□□ 0.41
SHANK3-201ENST00000262795 MICALCLQ6ZW33 695 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 DLATP10515 647 aaKnown RBP17.62■□□□□ 0.41
SHANK3-201ENST00000262795 KRT81Q14533 505 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 HERC4Q5GLZ8 1057 aaPredicted RBP17.62■□□□□ 0.41
SHANK3-201ENST00000262795 ZNF569Q5MCW4 686 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 INPP5FQ9Y2H2 1132 aa17.62■□□□□ 0.41
SHANK3-201ENST00000262795 OSTNP61366 133 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 ZNF467Q7Z7K2 595 aaPredicted RBP17.61■□□□□ 0.41
SHANK3-201ENST00000262795 CCDC42Q96M95 316 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 ESYT1Q9BSJ8 1104 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 MMP10P09238 476 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 RAET1EQ8TD07 263 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 MRPS27Q92552 414 aaKnown RBP17.61■□□□□ 0.41
SHANK3-201ENST00000262795 LMBR1Q8WVP7 490 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 TTLL7Q6ZT98 887 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 TMX3Q96JJ7 454 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 NSD2O96028 1365 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 GCKRQ14397 625 aa17.61■□□□□ 0.41
SHANK3-201ENST00000262795 LONRF3Q496Y0 759 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 DAAM2Q86T65 1068 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 CIAPIN1Q6FI81 312 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 RRAGDQ9NQL2 400 aaPredicted RBP17.6■□□□□ 0.41
SHANK3-201ENST00000262795 IGHDP01880 384 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 DCLK2Q8N568 766 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 KCNJ14Q9UNX9 436 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 TYW5A2RUC4 315 aaKnown RBP17.6■□□□□ 0.41
SHANK3-201ENST00000262795 TNNC2P02585 160 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 ZSCAN22P10073 491 aaPredicted RBP17.6■□□□□ 0.41
SHANK3-201ENST00000262795 FOXD4Q12950 439 aaPredicted RBP17.6■□□□□ 0.41
SHANK3-201ENST00000262795 PSMD6Q15008 389 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 DDX12PQ92771 950 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 SUCLG2Q96I99 432 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 TLR3O15455 904 aaKnown RBP17.6■□□□□ 0.41
SHANK3-201ENST00000262795 TTLL6Q8N841 843 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 CFAP57Q96MR6 1250 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 TRIM7Q9C029 511 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 VPS16Q9H269 839 aa17.6■□□□□ 0.41
SHANK3-201ENST00000262795 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 BEND3Q5T5X7 828 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 NME8Q8N427 588 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 CCDC77Q9BR77 488 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 TACC1O75410 805 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 FAM49AQ9H0Q0 323 aaPredicted RBP17.59■□□□□ 0.41
SHANK3-201ENST00000262795 TTC36A6NLP5 189 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 RSRC2Q7L4I2 434 aaKnown RBP17.59■□□□□ 0.41
SHANK3-201ENST00000262795 DNAJC25Q9H1X3 360 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 NFX1Q12986 1120 aaKnown RBP17.59■□□□□ 0.41
SHANK3-201ENST00000262795 FAM160B1Q5W0V3 765 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 ACRBPQ8NEB7 543 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 STAMQ92783 540 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 TRAPPC8Q9Y2L5 1435 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 CLCN1P35523 988 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 KSR1Q8IVT5 923 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 ZNF496Q96IT1 587 aaPredicted RBP17.59■□□□□ 0.41
SHANK3-201ENST00000262795 UBN1Q9NPG3 1134 aa17.59■□□□□ 0.41
SHANK3-201ENST00000262795 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.59■□□□□ 0.41
SHANK3-201ENST00000262795 SMCO2A6NFE2 343 aa17.58■□□□□ 0.41
SHANK3-201ENST00000262795 ATF7P17544 494 aaPredicted RBP17.58■□□□□ 0.41
SHANK3-201ENST00000262795 TRIM50Q86XT4 487 aa17.58■□□□□ 0.41
SHANK3-201ENST00000262795 LZTFL1Q9NQ48 299 aa17.58■□□□□ 0.41
SHANK3-201ENST00000262795 DISC1Q9NRI5 854 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms