RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 HERC4Q5GLZ8 1057 aaPredicted RBP12.71□□□□□ -0.37
NIN-201ENST00000245441 BEND3Q5T5X7 828 aa12.71□□□□□ -0.37
NIN-201ENST00000245441 CABS1Q96KC9 395 aa12.71□□□□□ -0.37
NIN-201ENST00000245441 VCXQ9H320 206 aa12.71□□□□□ -0.37
NIN-201ENST00000245441 ADCY7P51828 1080 aa12.71□□□□□ -0.37
NIN-201ENST00000245441 USP19O94966 1318 aa12.71□□□□□ -0.37
NIN-201ENST00000245441 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
NIN-201ENST00000245441 ATP5JP18859 108 aa12.71□□□□□ -0.37
NIN-201ENST00000245441 KLHL30Q0D2K2 578 aa12.71□□□□□ -0.37
NIN-201ENST00000245441 TRPC3Q13507 836 aa12.71□□□□□ -0.37
NIN-201ENST00000245441 JDP2Q8WYK2 163 aa12.71□□□□□ -0.37
NIN-201ENST00000245441 STRN3Q13033 797 aa12.71□□□□□ -0.38
NIN-201ENST00000245441 ME3Q16798 604 aa12.71□□□□□ -0.38
NIN-201ENST00000245441 GKAP1Q5VSY0 366 aaPredicted RBP12.71□□□□□ -0.38
NIN-201ENST00000245441 E7EWF7 191 aa12.71□□□□□ -0.38
NIN-201ENST00000245441 GCKRQ14397 625 aa12.71□□□□□ -0.38
NIN-201ENST00000245441 ZNF274Q96GC6 653 aaPredicted RBP12.71□□□□□ -0.38
NIN-201ENST00000245441 JAG2Q9Y219 1238 aa12.71□□□□□ -0.38
NIN-201ENST00000245441 LGSNQ5TDP6 509 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 SDCCAG8Q86SQ7 713 aaPredicted RBP12.7□□□□□ -0.38
NIN-201ENST00000245441 SNX29Q8TEQ0 813 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 GCNT3O95395 438 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 SLC1A4P43007 532 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 NONOQ15233 471 aaKnown RBP eCLIP12.7□□□□□ -0.38
NIN-201ENST00000245441 FAM173BQ6P4H8 233 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
NIN-201ENST00000245441 MED4Q9NPJ6 270 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 CCDC169A6NNP5 214 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 C2CD5Q86YS7 1000 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 CHMP2AO43633 222 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 TXKP42681 527 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 WHAMMP3Q1A5X7 153 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 PHLDB2Q86SQ0 1253 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 TRIML1Q8N9V2 468 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 HIBADHP31937 336 aaKnown RBP12.7□□□□□ -0.38
NIN-201ENST00000245441 MAGEA1P43355 309 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 CCDC89Q8N998 374 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 LRWD1Q9UFC0 647 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.7□□□□□ -0.38
NIN-201ENST00000245441 SPATS2Q86XZ4 545 aaKnown RBP12.7□□□□□ -0.38
NIN-201ENST00000245441 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 PPANQ9NQ55 473 aaKnown RBP12.7□□□□□ -0.38
NIN-201ENST00000245441 TAB2Q9NYJ8 693 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 CEP104O60308 925 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 CRCPO75575 148 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 TTC16Q8NEE8 873 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 AATFQ9NY61 560 aaKnown RBP eCLIP12.7□□□□□ -0.38
NIN-201ENST00000245441 CTTNBP2NLQ9P2B4 639 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 JAK2O60674 1132 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 KRT71Q3SY84 523 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 SLF1Q9BQI6 1058 aa12.7□□□□□ -0.38
NIN-201ENST00000245441 SAP30BPQ9UHR5 308 aaKnown RBP12.7□□□□□ -0.38
NIN-201ENST00000245441 EFCAB8A8MWE9 144 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 XRCC5P13010 732 aaKnown RBP12.69□□□□□ -0.38
NIN-201ENST00000245441 NOSTRINQ8IVI9 506 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 ARHGEF2Q92974 986 aaKnown RBP12.69□□□□□ -0.38
NIN-201ENST00000245441 TRIM31Q9BZY9 425 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 PNOCQ13519 176 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 DCUN1D2Q6PH85 259 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 OR8K1Q8NGG5 319 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 CCT6BQ92526 530 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 ZNF532Q9HCE3 1301 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 KDRP35968 1356 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 RBM6P78332 1123 aaKnown RBP12.69□□□□□ -0.38
NIN-201ENST00000245441 EPSTI1Q96J88 318 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 KLHDC4Q8TBB5 520 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 ZNF131P52739 623 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 SP4Q02446 784 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 VSIG1Q86XK7 387 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.69□□□□□ -0.38
NIN-201ENST00000245441 MAIP1Q8WWC4 291 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 PSMB7Q99436 277 aa12.69□□□□□ -0.38
NIN-201ENST00000245441 KCNJ18B7U540 433 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 GIPC1O14908 333 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 KCNJ12Q14500 433 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 MRFAP1L1Q96HT8 127 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 PARP3Q9Y6F1 533 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 PPFIA4O75335 1185 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 RASA3Q14644 834 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 NBPF14Q5TI25 921 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 TYW1BQ6NUM6 668 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 MIPOL1Q8TD10 442 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 KCNG1Q9UIX4 513 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 GNPATO15228 680 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 TMOD4Q9NZQ9 345 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 SRGAP1Q7Z6B7 1085 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
NIN-201ENST00000245441 HAUS2Q9NVX0 235 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 ZSCAN26Q16670 478 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 LRRC8AQ8IWT6 810 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 NUF2Q9BZD4 464 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 UFL1O94874 794 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 HHATQ5VTY9 493 aa12.68□□□□□ -0.38
NIN-201ENST00000245441 FAM207AQ9NSI2 230 aaPredicted RBP12.68□□□□□ -0.38
NIN-201ENST00000245441 RRAGAQ7L523 313 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms