RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TDRD3Q9H7E2 651 aaKnown RBP22.86■■□□□ 1.25
TNFRSF1A-201ENST00000162749 RBM28Q9NW13 759 aaKnown RBP22.86■■□□□ 1.25
TNFRSF1A-201ENST00000162749 GREB1LQ9C091 1923 aaPredicted RBP22.86■■□□□ 1.25
TNFRSF1A-201ENST00000162749 GADD45BO75293 160 aaPredicted RBP22.86■■□□□ 1.25
TNFRSF1A-201ENST00000162749 NPM3O75607 178 aaKnown RBP22.86■■□□□ 1.25
TNFRSF1A-201ENST00000162749 TRIM22Q8IYM9 498 aa22.86■■□□□ 1.25
TNFRSF1A-201ENST00000162749 KAT14Q9H8E8 782 aa22.86■■□□□ 1.25
TNFRSF1A-201ENST00000162749 GUCY1A2P33402 732 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 PNMA1Q8ND90 353 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 JDP2Q8WYK2 163 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 STX8Q9UNK0 236 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 PLIN4Q96Q06 1357 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 SPDYE2BA6NHP3 402 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 HLA-DOAP06340 250 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 SPDYE6P0CI01 402 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 ZNF445P59923 1031 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 FUT2Q10981 343 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 OGFOD1Q8N543 542 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 EHD4Q9H223 541 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 DHX36Q9H2U1 1008 aaKnown RBP22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 SWAP70Q9UH65 585 aa22.85■■□□□ 1.25
TNFRSF1A-201ENST00000162749 MYH4Q9Y623 1939 aa22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 PLEKHA8P1O95397 391 aa22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 ZSCAN23Q3MJ62 389 aa22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 AGBL3Q8NEM8 1001 aa22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CTCFLQ8NI51 663 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 RNF26Q9BY78 433 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 HDAC9Q9UKV0 1011 aa22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 LTBP3Q9NS15 1303 aa22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 DDTLA6NHG4 134 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 DEXIO95424 95 aa22.84■■□□□ 1.25
TNFRSF1A-201ENST00000162749 MBD3O95983 291 aa22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 SHMT1P34896 483 aa22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CSPP1Q1MSJ5 1256 aa22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 KRT40Q6A162 431 aa22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 TMTC3Q6ZXV5 915 aa22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 SH3BP5LQ7L8J4 393 aa22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 WASF1Q92558 559 aa22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 CEP95Q96GE4 821 aa22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 TMEM47Q9BQJ4 181 aa22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 TFIP11Q9UBB9 837 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1A-201ENST00000162749 FAM43AQ8N2R8 423 aa22.82■■□□□ 1.24
TNFRSF1A-201ENST00000162749 DNAJC18Q9H819 358 aa22.82■■□□□ 1.24
TNFRSF1A-201ENST00000162749 RBM27Q9P2N5 1060 aaKnown RBP22.82■■□□□ 1.24
TNFRSF1A-201ENST00000162749 CIAPIN1Q6FI81 312 aa22.82■■□□□ 1.24
TNFRSF1A-201ENST00000162749 SCAND2PQ9GZW5 306 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF1A-201ENST00000162749 SPON1Q9HCB6 807 aa22.82■■□□□ 1.24
TNFRSF1A-201ENST00000162749 SLURP2P0DP57 97 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 NOVP48745 357 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 KIF23Q02241 960 aaPredicted RBP22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 RASSF7Q02833 373 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 MAP3K14Q99558 947 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 PI4KBQ9UBF8 816 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 TAOK2Q9UL54 1235 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 ELP1O95163 1332 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 ATRNL1Q5VV63 1379 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 AKR1B1P15121 316 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 DLGAP5Q15398 846 aa22.81■■□□□ 1.24
TNFRSF1A-201ENST00000162749 KIF28PB7ZC32 967 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 ENTPD3O75355 529 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 KIF5BP33176 963 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 PRELPP51888 382 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 UBE2HP62256 183 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 ZSCAN29Q8IWY8 852 aaPredicted RBP22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 SRBD1Q8N5C6 995 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 CNTNAP5Q8WYK1 1306 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 COL2A1P02458 1487 aaPredicted RBP22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 TRIM29Q14134 588 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 SPATA32Q96LK8 384 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 TMEM63CQ9P1W3 806 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 CFAP45Q9UL16 551 aa22.8■■□□□ 1.24
TNFRSF1A-201ENST00000162749 DICER1Q9UPY3 1922 aaKnown RBP22.79■■□□□ 1.24
TNFRSF1A-201ENST00000162749 PRPF3O43395 683 aaKnown RBP22.79■■□□□ 1.24
TNFRSF1A-201ENST00000162749 PKN1Q16512 942 aa22.79■■□□□ 1.24
TNFRSF1A-201ENST00000162749 LEO1Q8WVC0 666 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF1A-201ENST00000162749 IGKV6D-41A0A0C4DH26 115 aa22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 AKAP17AQ02040 695 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 GRM4Q14833 912 aa22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 BRAPQ7Z569 592 aa22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 MTMR14Q8NCE2 650 aa22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 MTMR4Q9NYA4 1195 aa22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 CLRN2A0PK11 232 aa22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 FAM196BA6NMK8 535 aa22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 USP28Q96RU2 1077 aa22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 FTOQ9C0B1 505 aaKnown RBP eCLIP22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 MAD2L2Q9UI95 211 aa22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 V9GY48 417 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF1A-201ENST00000162749 hCG_1642624A0A1W2PR95 340 aa22.77■■□□□ 1.24
TNFRSF1A-201ENST00000162749 TOP1P11387 765 aaKnown RBP22.77■■□□□ 1.24
TNFRSF1A-201ENST00000162749 ATL3Q6DD88 541 aa22.77■■□□□ 1.24
TNFRSF1A-201ENST00000162749 STAG2Q8N3U4 1231 aa22.77■■□□□ 1.24
TNFRSF1A-201ENST00000162749 TMOD2Q9NZR1 351 aa22.77■■□□□ 1.24
TNFRSF1A-201ENST00000162749 SBF1O95248 1867 aa22.77■■□□□ 1.24
TNFRSF1A-201ENST00000162749 TNIP1Q15025 636 aa22.77■■□□□ 1.24
TNFRSF1A-201ENST00000162749 SPDYE2Q495Y8 402 aa22.77■■□□□ 1.24
TNFRSF1A-201ENST00000162749 ZNF70Q9UC06 446 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF1A-201ENST00000162749 MMP1P03956 469 aa22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 CEBPZQ03701 1054 aaKnown RBP22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 MYSM1Q5VVJ2 828 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms