RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Eif1aQ60872 144 aaKnown RBP5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Dpf2Q61103 391 aaKnown RBP5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Fstl1Q62356 306 aa5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 WhrnQ80VW5 918 aa5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Eif1axQ8BMJ3 144 aaKnown RBP5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Fam53cQ8BXQ8 393 aa5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Dnajc22Q8CHS2 339 aa5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 GrhprQ91Z53 328 aa5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Prmt3Q922H1 532 aa5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Mtcl1Q3UHU5 1945 aa5.58□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Gm11758A2BEI6 360 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Gm11757A2BEI8 360 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Dctn1O08788 1281 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Tnnt1O88346 262 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Chrna5Q2MKA5 467 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Dennd1bQ3U1T9 766 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Klhl23Q6GQU2 558 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Fbxl21Q8BFZ4 434 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Ddx60E9PZQ1 1711 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Flt4P35917 1363 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Mrc1Q61830 1456 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Gm18596A0A1W2P860 280 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Gm7347D3YYI9 267 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Zc3h12bG3X9I7 835 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Parp2O88554 559 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Lrch1P62046 709 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Hspa8P63017 646 aaKnown RBP5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Phactr1Q2M3X8 580 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Cpa6Q5U901 438 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Vil1Q62468 827 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Znf629Q6A085 867 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Soga3Q6NZL0 945 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Mylk2Q8VCR8 613 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Pcdhb13Q91Y06 796 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Calr3Q9D9Q6 380 aa5.57□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Flt1P35969 1333 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Ssc5dQ8BV57 1371 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Zfpm1O35615 995 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 TaglnP37804 201 aaKnown RBP5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Ptpn5P54830 541 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Sema3eP70275 775 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Znf48Q3US17 591 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Tmem40Q4FJU9 225 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Tsen2Q6P7W5 460 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Atxn2lQ7TQH0 1049 aaKnown RBP5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Cnpy4Q8BQ47 245 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Tctn1Q8BZ64 593 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Srek1Q8BZX4 494 aaKnown RBP5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 HdlbpQ8VDJ3 1268 aaKnown RBP5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Tmco4Q91WU4 631 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Ddx27Q921N6 760 aaKnown RBP5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Ttc5Q99LG4 440 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Cela3bQ9CQ52 269 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Klf15Q9EPW2 415 aa5.56□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Pappa2E9PZ87 1789 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Abcc12Q80WJ6 1366 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Hspa2P17156 633 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Ggnbp2Q5SV77 696 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Cep131Q62036 1060 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Flad1Q8R123 492 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Psmd2Q8VDM4 908 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Pcdhb11Q91UZ8 797 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Capn12Q9ER56 720 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Dnajb2Q9QYI5 324 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Stau1Q9Z108 487 aaKnown RBP5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Lama4P97927 1816 aa5.55□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Scn9aQ62205 1984 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Gm3252E9PUT9 216 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Gm3002E9PW72 216 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Gm3468E9QAJ8 216 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Klhl33G3UW92 533 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Gm3739L7N296 216 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Gm3164L7N2B9 238 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Grem1O70326 184 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Cd19P25918 547 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Igfbp6P47880 238 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Rtkn2Q14B46 604 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Thrap3Q569Z6 951 aaKnown RBP5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Zc3h12cQ5DTV4 884 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Insm1Q63ZV0 521 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 U2af1Q9D883 239 aaKnown RBP5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 DmgdhQ9DBT9 869 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 TefQ9JLC6 301 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Aebp2Q9Z248 504 aaKnown RBP5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Mybbp1aQ7TPV4 1344 aaKnown RBP5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Rtf1A2AQ19 715 aaKnown RBP5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Glt1d1A4FUP9 346 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Pibf1E9Q6K3 756 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Atp6v0a2P15920 856 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 CtgfP29268 348 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Iqsec3Q3TES0 1195 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Tom1l2Q5SRX1 507 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Mfsd6Q8CBH5 775 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Igf2bp3Q9CPN8 579 aaKnown RBP5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Tomm22Q9CPQ3 142 aa5.54□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Duox1A2AQ92 1551 aa5.53□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Trpm7Q923J1 1863 aa5.53□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Zscan18E9PUD6 809 aa5.53□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Pnmal2G3X9N3 661 aa5.53□□□□□ -1.52
Hmgb1-203ENSMUST00000110505 Eif6O55135 245 aa5.53□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms