RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gja8P28236 440 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Gucy2eP52785 1108 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 MaeaQ4VC33 396 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Nacc1Q7TSZ8 514 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Diaph3Q9Z207 1171 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Mtss1lQ6P9S0 715 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Xpo4Q9ESJ0 1151 aa13.15□□□□□ -0.3
Trim56-201ENSMUST00000054384 Nlrp14Q6B966 993 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Herc4Q6PAV2 1057 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 RragaQ80X95 313 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Tbx22Q8K402 517 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Dach1Q9QYB2 751 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 CopeO89079 308 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Fam207aP58468 219 aaKnown RBP13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Taco1Q8K0Z7 294 aaKnown RBP13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Kif2cQ922S8 721 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Psma7Q9Z2U0 248 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Talpid3E9PV87 1520 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 S100a5P63084 93 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 PhexP70669 749 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Hgh1Q8C3I8 393 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Dnm2P39054 870 aaKnown RBP13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Mdh1bQ5F204 500 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Lrriq1Q0P5X1 1673 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Cct6aP80317 531 aaKnown RBP13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Gm14685Q52KH6 695 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Gm6121L7MUF1 212 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Casp2P29594 452 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Sh3bp1P55194 680 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 CalcaP70160 136 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Zbtb41Q811F1 908 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Tsc1Q9EP53 1161 aa13.14□□□□□ -0.31
Trim56-201ENSMUST00000054384 Bin2D3Z6Q9 489 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Apol7eQ3UZ24 369 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Q8BZJ8 459 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Adcy8P97490 1249 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Ano9P86044 747 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Micall2Q3TN34 1009 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Rnf168Q80XJ2 565 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Liat1Q810M6 228 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Nsmce1Q9D720 266 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Rtel1Q0VGM9 1203 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Cabcoco1Q8CDT7 208 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Ror2Q9Z138 944 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Syne3Q4FZC9 975 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 SympkQ80X82 1284 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Tpcn2Q8BWC0 731 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Kdm5cP41230 1554 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Xbp1O35426 267 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Bmp2kQ91Z96 1138 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 BC005561E9Q5E2 1589 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Plxnc1Q9QZC2 1574 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Krt9Q6RHW0 743 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Gm5169Q5M8P2 212 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Ttc4Q8R3H9 386 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Spc24Q9D083 201 aa13.13□□□□□ -0.31
Trim56-201ENSMUST00000054384 Bpifb4A2BGH0 617 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Eif6O55135 245 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Pfdn6Q03958 127 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Hace1Q3U0D9 909 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Elf1Q60775 612 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Clec16aQ80U30 1036 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 AatfQ9JKX4 526 aaKnown RBP13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Emilin2Q8K482 1074 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Galnt15Q9D2N8 638 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Rilpl1Q9JJC6 406 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 SnrkQ8VDU5 748 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Dph5Q9CWQ0 281 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Zcchc8Q9CYA6 709 aaKnown RBP13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Lonrf2B2RT44 518 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 DgkiD3YWQ0 1071 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Camsap3Q80VC9 1252 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Osbpl1aQ91XL9 950 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Mlh1Q9JK91 760 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 AU019823E9PUQ3 292 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Usp35M0QWN7 1009 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Srrm1Q52KI8 946 aaKnown RBP13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Arhgef1Q61210 920 aaKnown RBP13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 TrhQ62361 256 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Pacsin2Q9WVE8 486 aaKnown RBP13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Tmem94Q7TSH8 1360 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Itga6Q61739 1091 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Ppp2r5bQ6PD28 497 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Fam133bQ9CVI2 245 aaKnown RBP13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Stk36Q69ZM6 1316 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Prl3d2F6R3P9 224 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Igsf3Q6ZQA6 1194 aa13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Nxf1Q99JX7 618 aaKnown RBP13.12□□□□□ -0.31
Trim56-201ENSMUST00000054384 Grin2aP35436 1464 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Plb1Q3TTY0 1478 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Cnbd1B1AWM0 430 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Tmtc1Q3UV71 942 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Anapc5Q8BTZ4 740 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Serpinb12Q9D7P9 423 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Psmc2P46471 433 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Tnnc2P20801 160 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Tnni3P48787 211 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 MycbpQ9EQS3 103 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Tom1O88746 492 aa13.11□□□□□ -0.31
Trim56-201ENSMUST00000054384 Ttc14Q9CSP9 761 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms