RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Sp4Q62445 782 aa20.26■□□□□ 0.83
Trim54-201ENSMUST00000013771 Liat1Q810M6 228 aa20.26■□□□□ 0.83
Trim54-201ENSMUST00000013771 Cyp26b1Q811W2 512 aa20.26■□□□□ 0.83
Trim54-201ENSMUST00000013771 Ift74Q8BKE9 600 aa20.26■□□□□ 0.83
Trim54-201ENSMUST00000013771 MlphQ91V27 590 aa20.26■□□□□ 0.83
Trim54-201ENSMUST00000013771 Capn10Q9ESK3 666 aa20.26■□□□□ 0.83
Trim54-201ENSMUST00000013771 Gml2G5E8L7 176 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Gm3138K7N754 218 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Cyp2d9P11714 504 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Ube2q1Q7TSS2 422 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Dpp8Q80YA7 892 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Adgra1Q8C4G9 578 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 E4f1Q8CCE9 783 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Myt1Q8CFC2 1127 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Dlk2Q8K1E3 382 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Defb15Q8R2I5 79 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Ivns1abpQ920Q8 642 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Alpk1Q9CXB8 1231 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Tbc1d7Q9D0K0 293 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Add2Q9QYB8 725 aa20.25■□□□□ 0.83
Trim54-201ENSMUST00000013771 Parp2O88554 559 aa20.24■□□□□ 0.83
Trim54-201ENSMUST00000013771 Atp11aP98197 1187 aa20.24■□□□□ 0.83
Trim54-201ENSMUST00000013771 Samd11Q1RNF8 542 aa20.24■□□□□ 0.83
Trim54-201ENSMUST00000013771 Supt20hQ7TT00 530 aaKnown RBP20.24■□□□□ 0.83
Trim54-201ENSMUST00000013771 Cdk8Q8R3L8 464 aa20.24■□□□□ 0.83
Trim54-201ENSMUST00000013771 Ctu1Q99J10 420 aa20.24■□□□□ 0.83
Trim54-201ENSMUST00000013771 Prkab1Q9R078 270 aa20.24■□□□□ 0.83
Trim54-201ENSMUST00000013771 Atg4a-psA0A0G2JFS9 396 aa20.23■□□□□ 0.83
Trim54-201ENSMUST00000013771 LtkP08923 888 aa20.23■□□□□ 0.83
Trim54-201ENSMUST00000013771 Hoxc10P31257 342 aa20.23■□□□□ 0.83
Trim54-201ENSMUST00000013771 Znf667Q2TL60 609 aa20.23■□□□□ 0.83
Trim54-201ENSMUST00000013771 Fscn2Q32M02 492 aa20.23■□□□□ 0.83
Trim54-201ENSMUST00000013771 Ehmt1Q5DW34 1296 aa20.23■□□□□ 0.83
Trim54-201ENSMUST00000013771 Entpd3Q8BFW6 529 aa20.23■□□□□ 0.83
Trim54-201ENSMUST00000013771 Atg4aQ8C9S8 396 aa20.23■□□□□ 0.83
Trim54-201ENSMUST00000013771 Eid1Q9DCR4 169 aa20.23■□□□□ 0.83
Trim54-201ENSMUST00000013771 Kmt2eQ3UG20 1868 aa20.22■□□□□ 0.83
Trim54-201ENSMUST00000013771 AoahO35298 574 aa20.22■□□□□ 0.83
Trim54-201ENSMUST00000013771 Csf2raQ00941 388 aa20.22■□□□□ 0.83
Trim54-201ENSMUST00000013771 Col19a1Q0VF58 1136 aa20.22■□□□□ 0.83
Trim54-201ENSMUST00000013771 Gm10392Q3V3I3 114 aa20.22■□□□□ 0.83
Trim54-201ENSMUST00000013771 HelbQ6NVF4 1074 aa20.22■□□□□ 0.83
Trim54-201ENSMUST00000013771 Pqbp1Q91VJ5 263 aaKnown RBP20.22■□□□□ 0.83
Trim54-201ENSMUST00000013771 Il6stQ00560 917 aa20.21■□□□□ 0.83
Trim54-201ENSMUST00000013771 Aak1Q3UHJ0 959 aa20.21■□□□□ 0.83
Trim54-201ENSMUST00000013771 Babam1Q3UI43 333 aa20.21■□□□□ 0.83
Trim54-201ENSMUST00000013771 Ccdc85aQ5SP85 500 aa20.21■□□□□ 0.83
Trim54-201ENSMUST00000013771 Ctr9Q62018 1173 aaKnown RBP20.21■□□□□ 0.83
Trim54-201ENSMUST00000013771 FanclQ9CR14 375 aa20.21■□□□□ 0.83
Trim54-201ENSMUST00000013771 Sapcd2Q9D818 391 aa20.21■□□□□ 0.83
Trim54-201ENSMUST00000013771 Pidd1Q9ERV7 915 aa20.21■□□□□ 0.83
Trim54-201ENSMUST00000013771 Fkbp1bQ9Z2I2 108 aa20.21■□□□□ 0.83
Trim54-201ENSMUST00000013771 Pnmal2G3X9N3 661 aa20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 Pitpnm1O35954 1243 aa20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 Slc6a20bO88575 635 aa20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 TxnP10639 105 aaKnown RBP20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 Serpinb13Q8CDC0 389 aa20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 Bclaf1Q8K019 919 aaKnown RBP20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 Ttc8Q8VD72 515 aa20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 Syt17Q920M7 470 aa20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 Ddx50Q99MJ9 734 aaKnown RBP20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 Appbp2Q9DAX9 585 aa20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 Pus3Q9JI38 481 aa20.2■□□□□ 0.82
Trim54-201ENSMUST00000013771 A0A1W2P6Q8 802 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Gm9048A0A1W2P7H4 802 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 A0A1W2P7Z8 802 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Gm9046A0A1W2P855 802 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Wfdc16A2A5H4 111 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Ano3A2AHL1 981 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Flot1O08917 428 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Sema3fO88632 785 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Slc4a3P16283 1227 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Fxr1Q61584 677 aaKnown RBP20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Smc5Q8CG46 1101 aaKnown RBP20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Cluap1Q8R3P7 413 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Duxf3A0A0N4SV92 674 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Pcdhb9E9Q5G2 828 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 PomkQ3TUA9 349 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Tpd52Q62393 224 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Ttll4Q80UG8 1193 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Siglec10Q80ZE3 688 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Smoc2Q8CD91 447 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Dppa3Q8QZY3 150 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 EspnQ9ET47 871 aa20.19■□□□□ 0.82
Trim54-201ENSMUST00000013771 Abl1P00520 1123 aa20.18■□□□□ 0.82
Trim54-201ENSMUST00000013771 Tex2Q6ZPJ0 1128 aaKnown RBP20.18■□□□□ 0.82
Trim54-201ENSMUST00000013771 Taco1Q8K0Z7 294 aaKnown RBP20.18■□□□□ 0.82
Trim54-201ENSMUST00000013771 Ces1dQ8VCT4 565 aa20.18■□□□□ 0.82
Trim54-201ENSMUST00000013771 Rbm43Q99J64 343 aa20.18■□□□□ 0.82
Trim54-201ENSMUST00000013771 SmapQ9R0P4 181 aaKnown RBP20.18■□□□□ 0.82
Trim54-201ENSMUST00000013771 SrcapA0A087WQ44 3271 aa20.18■□□□□ 0.82
Trim54-201ENSMUST00000013771 PhipQ8VDD9 1821 aaKnown RBP20.17■□□□□ 0.82
Trim54-201ENSMUST00000013771 Rabgap1A2AWA9 1064 aa20.17■□□□□ 0.82
Trim54-201ENSMUST00000013771 Skint3A7TZF0 458 aa20.17■□□□□ 0.82
Trim54-201ENSMUST00000013771 Hoxc6P10629 235 aa20.17■□□□□ 0.82
Trim54-201ENSMUST00000013771 Gnat2P50149 354 aa20.17■□□□□ 0.82
Trim54-201ENSMUST00000013771 StamP70297 548 aa20.17■□□□□ 0.82
Trim54-201ENSMUST00000013771 HmgcrQ01237 887 aa20.17■□□□□ 0.82
Trim54-201ENSMUST00000013771 Pls1Q3V0K9 630 aa20.17■□□□□ 0.82
Trim54-201ENSMUST00000013771 Rhot2Q8JZN7 620 aa20.17■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms