RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Krtap4-9B1AQA9 244 aa7.49□□□□□ -1.21
Ubp1-203ENSMUST00000116492 Lce1fB9EJP6 147 aa7.48□□□□□ -1.21
Ubp1-203ENSMUST00000116492 Lce1a1Q9CQH5 143 aa7.48□□□□□ -1.21
Ubp1-203ENSMUST00000116492 Mt4P47945 62 aa7.43□□□□□ -1.22
Ubp1-203ENSMUST00000116492 Gm10142J3KMP7 120 aa7.41□□□□□ -1.22
Ubp1-203ENSMUST00000116492 Lce1bQ9D149 137 aa7.39□□□□□ -1.23
Ubp1-203ENSMUST00000116492 Gm38119A0A0A6YX29 146 aa7.33□□□□□ -1.24
Ubp1-203ENSMUST00000116492 Lce3cQ91V05 98 aa7.26□□□□□ -1.25
Ubp1-203ENSMUST00000116492 Lce3eF8VQJ0 98 aa7.23□□□□□ -1.25
Ubp1-203ENSMUST00000116492 Lce3fQ6PAI4 98 aa7.23□□□□□ -1.25
Ubp1-203ENSMUST00000116492 Krtap4-13Q9D7P3 165 aa7.23□□□□□ -1.25
Ubp1-203ENSMUST00000116492 Sprr2hO70559 108 aa7.19□□□□□ -1.26
Ubp1-203ENSMUST00000116492 Lce3dE9Q8V1 98 aa7.16□□□□□ -1.26
Ubp1-203ENSMUST00000116492 Sprr2iO70560 76 aa7.07□□□□□ -1.28
Ubp1-203ENSMUST00000116492 2300003K06RikA2A4M0 262 aa7.04□□□□□ -1.28
Ubp1-203ENSMUST00000116492 ObscnA2AAJ9 8891 aaKnown RBP7.01□□□□□ -1.29
Ubp1-203ENSMUST00000116492 Sprr2kO70562 68 aa7□□□□□ -1.29
Ubp1-203ENSMUST00000116492 Sprr2eO70556 76 aa6.98□□□□□ -1.29
Ubp1-203ENSMUST00000116492 Krtap6-3A0A087WQL6 57 aa6.97□□□□□ -1.29
Ubp1-203ENSMUST00000116492 Mt1P02802 61 aaKnown RBP6.94□□□□□ -1.3
Ubp1-203ENSMUST00000116492 Lce3aQ497I5 98 aa6.92□□□□□ -1.3
Ubp1-203ENSMUST00000116492 Lce1kJ3QP15 125 aa6.88□□□□□ -1.31
Ubp1-203ENSMUST00000116492 Lce1lQ9D1G7 135 aa6.88□□□□□ -1.31
Ubp1-203ENSMUST00000116492 Krtap4-7Q9D732 168 aa6.86□□□□□ -1.31
Ubp1-203ENSMUST00000116492 Sprr2fO70557 76 aa6.71□□□□□ -1.33
Ubp1-203ENSMUST00000116492 A0A1Y7VJH8 109 aa6.7□□□□□ -1.34
Ubp1-203ENSMUST00000116492 Gm11568A2A4M2 211 aa6.64□□□□□ -1.35
Ubp1-203ENSMUST00000116492 Krtap9-1Q64526 186 aa6.64□□□□□ -1.35
Ubp1-203ENSMUST00000116492 Krtap31-1Q9D644 177 aa6.58□□□□□ -1.36
Ubp1-203ENSMUST00000116492 Krtap5-2Q9D5Z7 189 aa6.54□□□□□ -1.36
Ubp1-203ENSMUST00000116492 Krtap20-2E9Q0A8 60 aa6.52□□□□□ -1.37
Ubp1-203ENSMUST00000116492 Krtap28-10A0A1Y7VP58 119 aa6.36□□□□□ -1.39
Ubp1-203ENSMUST00000116492 Gm10153A0A1B0GRL1 320 aa6.31□□□□□ -1.4
Ubp1-203ENSMUST00000116492 Mt3P28184 68 aa6.16□□□□□ -1.42
Ubp1-203ENSMUST00000116492 Krtap4-16Q91W93 202 aa6.13□□□□□ -1.43
Ubp1-203ENSMUST00000116492 Macf1Q9QXZ0 7354 aaKnown RBP6.12□□□□□ -1.43
Ubp1-203ENSMUST00000116492 A0A1Y7VLE6 161 aa6.11□□□□□ -1.43
Ubp1-203ENSMUST00000116492 Gm10024A0A0A0MQA4 119 aa6.1□□□□□ -1.43
Ubp1-203ENSMUST00000116492 Gm11559Q9D3H7 191 aa6.01□□□□□ -1.45
Ubp1-203ENSMUST00000116492 Krtap28-13A0A087WQP5 138 aa5.99□□□□□ -1.45
Ubp1-203ENSMUST00000116492 Gm4553A0A1B0GSA9 284 aa5.99□□□□□ -1.45
Ubp1-203ENSMUST00000116492 Gm45337A0A1B0GS71 263 aa5.98□□□□□ -1.45
Ubp1-203ENSMUST00000116492 A030005L19RikA0A1Y7VIU2 113 aa5.95□□□□□ -1.46
Ubp1-203ENSMUST00000116492 Gm11554B1AQB2 190 aa5.93□□□□□ -1.46
Ubp1-203ENSMUST00000116492 Eppk1Q8R0W0 6548 aa5.84□□□□□ -1.47
Ubp1-203ENSMUST00000116492 A030005K14RikA0A1Y7VNY1 122 aa5.83□□□□□ -1.48
Ubp1-203ENSMUST00000116492 Gm40460A0A1B0GR10 244 aa5.82□□□□□ -1.48
Ubp1-203ENSMUST00000116492 Gm7579A0A1B0GRJ4 243 aa5.82□□□□□ -1.48
Ubp1-203ENSMUST00000116492 Krtap5-5Q2TA51 241 aa5.82□□□□□ -1.48
Ubp1-203ENSMUST00000116492 Krtap5-4Q62220 223 aa5.82□□□□□ -1.48
Ubp1-203ENSMUST00000116492 Gm7544A0A1Y7VJ58 118 aa5.81□□□□□ -1.48
Ubp1-203ENSMUST00000116492 Hmcn1D3YXG0 5634 aa5.78□□□□□ -1.48
Ubp1-203ENSMUST00000116492 Gm2431E9Q8S1 172 aa5.77□□□□□ -1.49
Ubp1-203ENSMUST00000116492 Kmt2dQ6PDK2 5588 aa5.72□□□□□ -1.49
Ubp1-203ENSMUST00000116492 Muc19Q6PZE0 7524 aa5.56□□□□□ -1.52
Ubp1-203ENSMUST00000116492 Gm11639A0A1D5RLM8 5808 aa5.52□□□□□ -1.53
Ubp1-203ENSMUST00000116492 Muc16A0A140LJ72 8478 aa5.34□□□□□ -1.55
Ubp1-203ENSMUST00000116492 1110025L11RikO09048 78 aa5.33□□□□□ -1.56
Ubp1-203ENSMUST00000116492 Krtap6-5Q925H3 78 aa5.33□□□□□ -1.56
Ubp1-203ENSMUST00000116492 DstQ91ZU6 7393 aaKnown RBP5.32□□□□□ -1.56
Ubp1-203ENSMUST00000116492 Gm39115A0A1B0GSH7 232 aa5.32□□□□□ -1.56
Ubp1-203ENSMUST00000116492 A0A1Y7VJ07 166 aa5.17□□□□□ -1.58
Ubp1-203ENSMUST00000116492 Gpr98Q8VHN7 6298 aaKnown RBP5.08□□□□□ -1.6
Ubp1-203ENSMUST00000116492 A030003K21RikA0A1Y7VIM3 128 aa5.08□□□□□ -1.6
Ubp1-203ENSMUST00000116492 NebE9Q1W3 7152 aa5.08□□□□□ -1.6
Ubp1-203ENSMUST00000116492 A030014E15RikA0A1Y7VJV2 120 aa5.04□□□□□ -1.6
Ubp1-203ENSMUST00000116492 Krtap31-2Q8CAY5 177 aa5.02□□□□□ -1.61
Ubp1-203ENSMUST00000116492 Sprr2bO70554 98 aa4.93□□□□□ -1.62
Ubp1-203ENSMUST00000116492 A0A286YCP9 139 aa4.93□□□□□ -1.62
Ubp1-203ENSMUST00000116492 Gm6217A0A1Y7VJK9 128 aa4.91□□□□□ -1.62
Ubp1-203ENSMUST00000116492 AhnakE9Q616 5656 aaKnown RBP4.88□□□□□ -1.63
Ubp1-203ENSMUST00000116492 Gm45618A0A1B0GSA0 219 aa4.87□□□□□ -1.63
Ubp1-203ENSMUST00000116492 Gm10229O08631 77 aa4.71□□□□□ -1.66
Ubp1-203ENSMUST00000116492 Gm11567Q9D141 195 aa4.45□□□□□ -1.7
Ubp1-203ENSMUST00000116492 Gm29735A0A1B0GT06 219 aa4.42□□□□□ -1.7
Ubp1-203ENSMUST00000116492 Krtap21-1Q925H4 128 aa4.39□□□□□ -1.71
Ubp1-203ENSMUST00000116492 Phgr1Q8K0G7 91 aa4.24□□□□□ -1.73
Ubp1-203ENSMUST00000116492 Krtap6-2O08884 159 aa3.96□□□□□ -1.78
Ubp1-203ENSMUST00000116492 Krtap5-1Q64507 230 aa3□□□□□ -1.93
Ubp1-203ENSMUST00000116492 Gm4559A4IF42 199 aa2.53□□□□□ -2.01
Retrieved 80 of 22,080 RNA–protein pairs in 8.9 ms