RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Krtap4-2B1AQ85 167 aa4.84□□□□□ -1.63
Sptbn4-204ENSMUST00000108364 Sprr2eO70556 76 aa4.81□□□□□ -1.64
Sptbn4-204ENSMUST00000108364 Muc5bE9Q5I3 4800 aa4.81□□□□□ -1.64
Sptbn4-204ENSMUST00000108364 Krtap4-6Q3V4B7 195 aa4.8□□□□□ -1.64
Sptbn4-204ENSMUST00000108364 Gm11562A0PK51 136 aa4.8□□□□□ -1.64
Sptbn4-204ENSMUST00000108364 Gm10024A0A0A0MQA4 119 aa4.78□□□□□ -1.64
Sptbn4-204ENSMUST00000108364 Sprr2fO70557 76 aa4.75□□□□□ -1.65
Sptbn4-204ENSMUST00000108364 Sprr2hO70559 108 aa4.71□□□□□ -1.66
Sptbn4-204ENSMUST00000108364 SspoQ8CG65 4998 aa4.7□□□□□ -1.66
Sptbn4-204ENSMUST00000108364 Krtap4-1Q3UUY3 169 aa4.64□□□□□ -1.67
Sptbn4-204ENSMUST00000108364 Mt4P47945 62 aa4.64□□□□□ -1.67
Sptbn4-204ENSMUST00000108364 Fsip2A2ARZ3 6995 aa4.62□□□□□ -1.67
Sptbn4-204ENSMUST00000108364 Lce1a1Q9CQH5 143 aa4.6□□□□□ -1.67
Sptbn4-204ENSMUST00000108364 Gm11596B1AQB0 205 aa4.6□□□□□ -1.67
Sptbn4-204ENSMUST00000108364 Krtap4-16Q91W93 202 aa4.55□□□□□ -1.68
Sptbn4-204ENSMUST00000108364 Syne2Q6ZWQ0 6874 aaKnown RBP4.52□□□□□ -1.69
Sptbn4-204ENSMUST00000108364 Gm11564A2A4L9 201 aa4.52□□□□□ -1.69
Sptbn4-204ENSMUST00000108364 Gm11563B1AQ90 168 aa4.52□□□□□ -1.69
Sptbn4-204ENSMUST00000108364 Gm11595B1AQA7 289 aa4.52□□□□□ -1.69
Sptbn4-204ENSMUST00000108364 Krtap4-8B1AQA8 209 aa4.52□□□□□ -1.69
Sptbn4-204ENSMUST00000108364 Krtap4-9B1AQA9 244 aa4.48□□□□□ -1.69
Sptbn4-204ENSMUST00000108364 ObscnA2AAJ9 8891 aaKnown RBP4.37□□□□□ -1.71
Sptbn4-204ENSMUST00000108364 Krtap4-13Q9D7P3 165 aa4.35□□□□□ -1.71
Sptbn4-204ENSMUST00000108364 2300003K06RikA2A4M0 262 aa4.32□□□□□ -1.72
Sptbn4-204ENSMUST00000108364 Lce1kJ3QP15 125 aa4.32□□□□□ -1.72
Sptbn4-204ENSMUST00000108364 Krtap31-2Q8CAY5 177 aa4.3□□□□□ -1.72
Sptbn4-204ENSMUST00000108364 Krtap4-7Q9D732 168 aa4.24□□□□□ -1.73
Sptbn4-204ENSMUST00000108364 Gm11555B1AQ89 175 aa4.16□□□□□ -1.74
Sptbn4-204ENSMUST00000108364 Macf1Q9QXZ0 7354 aaKnown RBP4.14□□□□□ -1.75
Sptbn4-204ENSMUST00000108364 Mt1P02802 61 aaKnown RBP4.07□□□□□ -1.76
Sptbn4-204ENSMUST00000108364 Mt3P28184 68 aa4.04□□□□□ -1.76
Sptbn4-204ENSMUST00000108364 Krtap6-3A0A087WQL6 57 aa3.96□□□□□ -1.77
Sptbn4-204ENSMUST00000108364 DstQ91ZU6 7393 aaKnown RBP3.96□□□□□ -1.78
Sptbn4-204ENSMUST00000108364 Muc19Q6PZE0 7524 aa3.86□□□□□ -1.79
Sptbn4-204ENSMUST00000108364 Krtap20-2E9Q0A8 60 aa3.84□□□□□ -1.79
Sptbn4-204ENSMUST00000108364 Gm11554B1AQB2 190 aa3.77□□□□□ -1.81
Sptbn4-204ENSMUST00000108364 NebE9Q1W3 7152 aa3.74□□□□□ -1.81
Sptbn4-204ENSMUST00000108364 Sprr2bO70554 98 aa3.7□□□□□ -1.82
Sptbn4-204ENSMUST00000108364 Kmt2dQ6PDK2 5588 aa3.62□□□□□ -1.83
Sptbn4-204ENSMUST00000108364 Eppk1Q8R0W0 6548 aa3.53□□□□□ -1.84
Sptbn4-204ENSMUST00000108364 Gm11568A2A4M2 211 aa3.39□□□□□ -1.87
Sptbn4-204ENSMUST00000108364 Krtap9-1Q64526 186 aa3.39□□□□□ -1.87
Sptbn4-204ENSMUST00000108364 1110025L11RikO09048 78 aa3.33□□□□□ -1.88
Sptbn4-204ENSMUST00000108364 Krtap6-5Q925H3 78 aa3.33□□□□□ -1.88
Sptbn4-204ENSMUST00000108364 Gm11559Q9D3H7 191 aa3.28□□□□□ -1.88
Sptbn4-204ENSMUST00000108364 Krtap5-2Q9D5Z7 189 aa3.21□□□□□ -1.89
Sptbn4-204ENSMUST00000108364 Gm11639A0A1D5RLM8 5808 aa3.16□□□□□ -1.9
Sptbn4-204ENSMUST00000108364 Hmcn1D3YXG0 5634 aa3.15□□□□□ -1.91
Sptbn4-204ENSMUST00000108364 Gpr98Q8VHN7 6298 aaKnown RBP3.13□□□□□ -1.91
Sptbn4-204ENSMUST00000108364 Gm10229O08631 77 aa3.05□□□□□ -1.92
Sptbn4-204ENSMUST00000108364 Gm4553A0A1B0GSA9 284 aa3.01□□□□□ -1.93
Sptbn4-204ENSMUST00000108364 A0A1Y7VJH8 109 aa2.99□□□□□ -1.93
Sptbn4-204ENSMUST00000108364 Phgr1Q8K0G7 91 aa2.99□□□□□ -1.93
Sptbn4-204ENSMUST00000108364 Gm2431E9Q8S1 172 aa2.92□□□□□ -1.94
Sptbn4-204ENSMUST00000108364 Gm10153A0A1B0GRL1 320 aa2.88□□□□□ -1.95
Sptbn4-204ENSMUST00000108364 A030005L19RikA0A1Y7VIU2 113 aa2.79□□□□□ -1.96
Sptbn4-204ENSMUST00000108364 Gm45337A0A1B0GS71 263 aa2.79□□□□□ -1.96
Sptbn4-204ENSMUST00000108364 AhnakE9Q616 5656 aaKnown RBP2.71□□□□□ -1.97
Sptbn4-204ENSMUST00000108364 Gm40460A0A1B0GR10 244 aa2.7□□□□□ -1.98
Sptbn4-204ENSMUST00000108364 Gm7579A0A1B0GRJ4 243 aa2.7□□□□□ -1.98
Sptbn4-204ENSMUST00000108364 Krtap5-5Q2TA51 241 aa2.7□□□□□ -1.98
Sptbn4-204ENSMUST00000108364 Krtap5-4Q62220 223 aa2.7□□□□□ -1.98
Sptbn4-204ENSMUST00000108364 Gm39115A0A1B0GSH7 232 aa2.55□□□□□ -2
Sptbn4-204ENSMUST00000108364 Krtap21-1Q925H4 128 aa2.52□□□□□ -2.01
Sptbn4-204ENSMUST00000108364 Gm11567Q9D141 195 aa2.52□□□□□ -2.01
Sptbn4-204ENSMUST00000108364 Krtap6-2O08884 159 aa2.48□□□□□ -2.01
Sptbn4-204ENSMUST00000108364 A0A1Y7VLE6 161 aa2.45□□□□□ -2.02
Sptbn4-204ENSMUST00000108364 Gm45618A0A1B0GSA0 219 aa2.23□□□□□ -2.05
Sptbn4-204ENSMUST00000108364 Gm29735A0A1B0GT06 219 aa2.01□□□□□ -2.09
Sptbn4-204ENSMUST00000108364 A0A1Y7VJ07 166 aa1.7□□□□□ -2.14
Sptbn4-204ENSMUST00000108364 A030003K21RikA0A1Y7VIM3 128 aa1.52□□□□□ -2.17
Sptbn4-204ENSMUST00000108364 Krtap5-1Q64507 230 aa1.52□□□□□ -2.17
Sptbn4-204ENSMUST00000108364 A0A286YCP9 139 aa1.52□□□□□ -2.17
Sptbn4-204ENSMUST00000108364 A030005K14RikA0A1Y7VNY1 122 aa1.47□□□□□ -2.17
Sptbn4-204ENSMUST00000108364 Krtap28-13A0A087WQP5 138 aa1.47□□□□□ -2.17
Sptbn4-204ENSMUST00000108364 Krtap28-10A0A1Y7VP58 119 aa1.45□□□□□ -2.18
Sptbn4-204ENSMUST00000108364 Gm6217A0A1Y7VJK9 128 aa1.44□□□□□ -2.18
Sptbn4-204ENSMUST00000108364 Gm7544A0A1Y7VJ58 118 aa1.38□□□□□ -2.19
Sptbn4-204ENSMUST00000108364 A030014E15RikA0A1Y7VJV2 120 aa1.33□□□□□ -2.2
Sptbn4-204ENSMUST00000108364 Gm4559A4IF42 199 aa1.12□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 153.1 ms