RNA–Protein interactions for RNA: ENSMUST00000106149.7

Ssx2ip-202, Transcript of Afadin- and alpha-actinin-binding protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssx2ip, Length 2,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ip-202ENSMUST00000106149 Mt4P47945 62 aa7.7□□□□□ -1.18
Ssx2ip-202ENSMUST00000106149 Gm38119A0A0A6YX29 146 aa7.64□□□□□ -1.19
Ssx2ip-202ENSMUST00000106149 Syne2Q6ZWQ0 6874 aaKnown RBP7.63□□□□□ -1.19
Ssx2ip-202ENSMUST00000106149 Lce1bQ9D149 137 aa7.62□□□□□ -1.19
Ssx2ip-202ENSMUST00000106149 Gm10142J3KMP7 120 aa7.62□□□□□ -1.19
Ssx2ip-202ENSMUST00000106149 Krtap4-9B1AQA9 244 aa7.59□□□□□ -1.19
Ssx2ip-202ENSMUST00000106149 Fsip2A2ARZ3 6995 aa7.46□□□□□ -1.21
Ssx2ip-202ENSMUST00000106149 Lce3cQ91V05 98 aa7.43□□□□□ -1.22
Ssx2ip-202ENSMUST00000106149 Lce3eF8VQJ0 98 aa7.38□□□□□ -1.23
Ssx2ip-202ENSMUST00000106149 Lce3fQ6PAI4 98 aa7.38□□□□□ -1.23
Ssx2ip-202ENSMUST00000106149 Lce3dE9Q8V1 98 aa7.36□□□□□ -1.23
Ssx2ip-202ENSMUST00000106149 Sprr2hO70559 108 aa7.35□□□□□ -1.23
Ssx2ip-202ENSMUST00000106149 2300003K06RikA2A4M0 262 aa7.33□□□□□ -1.24
Ssx2ip-202ENSMUST00000106149 Krtap4-13Q9D7P3 165 aa7.32□□□□□ -1.24
Ssx2ip-202ENSMUST00000106149 Sprr2iO70560 76 aa7.25□□□□□ -1.25
Ssx2ip-202ENSMUST00000106149 Sprr2kO70562 68 aa7.22□□□□□ -1.25
Ssx2ip-202ENSMUST00000106149 ObscnA2AAJ9 8891 aaKnown RBP7.21□□□□□ -1.26
Ssx2ip-202ENSMUST00000106149 Sprr2eO70556 76 aa7.13□□□□□ -1.27
Ssx2ip-202ENSMUST00000106149 Lce1kJ3QP15 125 aa7.12□□□□□ -1.27
Ssx2ip-202ENSMUST00000106149 Mt1P02802 61 aaKnown RBP7.11□□□□□ -1.27
Ssx2ip-202ENSMUST00000106149 Lce1lQ9D1G7 135 aa7.08□□□□□ -1.28
Ssx2ip-202ENSMUST00000106149 Krtap4-7Q9D732 168 aa7.07□□□□□ -1.28
Ssx2ip-202ENSMUST00000106149 Lce3aQ497I5 98 aa7.06□□□□□ -1.28
Ssx2ip-202ENSMUST00000106149 Sprr2fO70557 76 aa6.91□□□□□ -1.3
Ssx2ip-202ENSMUST00000106149 A0A1Y7VJH8 109 aa6.9□□□□□ -1.3
Ssx2ip-202ENSMUST00000106149 Gm11568A2A4M2 211 aa6.86□□□□□ -1.31
Ssx2ip-202ENSMUST00000106149 Krtap9-1Q64526 186 aa6.86□□□□□ -1.31
Ssx2ip-202ENSMUST00000106149 Krtap31-1Q9D644 177 aa6.84□□□□□ -1.31
Ssx2ip-202ENSMUST00000106149 Krtap20-2E9Q0A8 60 aa6.78□□□□□ -1.32
Ssx2ip-202ENSMUST00000106149 Krtap5-2Q9D5Z7 189 aa6.73□□□□□ -1.33
Ssx2ip-202ENSMUST00000106149 Krtap6-3A0A087WQL6 57 aa6.66□□□□□ -1.34
Ssx2ip-202ENSMUST00000106149 Gm10153A0A1B0GRL1 320 aa6.48□□□□□ -1.37
Ssx2ip-202ENSMUST00000106149 Krtap4-16Q91W93 202 aa6.45□□□□□ -1.38
Ssx2ip-202ENSMUST00000106149 Mt3P28184 68 aa6.29□□□□□ -1.4
Ssx2ip-202ENSMUST00000106149 A0A1Y7VLE6 161 aa6.25□□□□□ -1.41
Ssx2ip-202ENSMUST00000106149 Gm10024A0A0A0MQA4 119 aa6.23□□□□□ -1.41
Ssx2ip-202ENSMUST00000106149 Macf1Q9QXZ0 7354 aaKnown RBP6.2□□□□□ -1.42
Ssx2ip-202ENSMUST00000106149 Gm4553A0A1B0GSA9 284 aa6.16□□□□□ -1.42
Ssx2ip-202ENSMUST00000106149 Gm45337A0A1B0GS71 263 aa6.14□□□□□ -1.43
Ssx2ip-202ENSMUST00000106149 Gm11559Q9D3H7 191 aa6.1□□□□□ -1.43
Ssx2ip-202ENSMUST00000106149 Hmcn1D3YXG0 5634 aa6.04□□□□□ -1.44
Ssx2ip-202ENSMUST00000106149 Gm2431E9Q8S1 172 aa5.98□□□□□ -1.45
Ssx2ip-202ENSMUST00000106149 Gm40460A0A1B0GR10 244 aa5.96□□□□□ -1.46
Ssx2ip-202ENSMUST00000106149 Gm7579A0A1B0GRJ4 243 aa5.96□□□□□ -1.46
Ssx2ip-202ENSMUST00000106149 Krtap5-5Q2TA51 241 aa5.96□□□□□ -1.46
Ssx2ip-202ENSMUST00000106149 Krtap5-4Q62220 223 aa5.96□□□□□ -1.46
Ssx2ip-202ENSMUST00000106149 Gm11554B1AQB2 190 aa5.91□□□□□ -1.46
Ssx2ip-202ENSMUST00000106149 Kmt2dQ6PDK2 5588 aa5.85□□□□□ -1.47
Ssx2ip-202ENSMUST00000106149 Muc16A0A140LJ72 8478 aa5.81□□□□□ -1.48
Ssx2ip-202ENSMUST00000106149 Gm39115A0A1B0GSH7 232 aa5.47□□□□□ -1.53
Ssx2ip-202ENSMUST00000106149 1110025L11RikO09048 78 aa5.43□□□□□ -1.54
Ssx2ip-202ENSMUST00000106149 Krtap6-5Q925H3 78 aa5.43□□□□□ -1.54
Ssx2ip-202ENSMUST00000106149 A030005L19RikA0A1Y7VIU2 113 aa5.39□□□□□ -1.55
Ssx2ip-202ENSMUST00000106149 Muc19Q6PZE0 7524 aa5.27□□□□□ -1.57
Ssx2ip-202ENSMUST00000106149 DstQ91ZU6 7393 aaKnown RBP5.22□□□□□ -1.57
Ssx2ip-202ENSMUST00000106149 Gm11639A0A1D5RLM8 5808 aa5.1□□□□□ -1.59
Ssx2ip-202ENSMUST00000106149 Krtap31-2Q8CAY5 177 aa5.03□□□□□ -1.6
Ssx2ip-202ENSMUST00000106149 A0A1Y7VJ07 166 aa4.98□□□□□ -1.61
Ssx2ip-202ENSMUST00000106149 AhnakE9Q616 5656 aaKnown RBP4.97□□□□□ -1.61
Ssx2ip-202ENSMUST00000106149 Eppk1Q8R0W0 6548 aa4.96□□□□□ -1.62
Ssx2ip-202ENSMUST00000106149 Sprr2bO70554 98 aa4.93□□□□□ -1.62
Ssx2ip-202ENSMUST00000106149 Gm10229O08631 77 aa4.8□□□□□ -1.64
Ssx2ip-202ENSMUST00000106149 Gm45618A0A1B0GSA0 219 aa4.66□□□□□ -1.66
Ssx2ip-202ENSMUST00000106149 Gm11567Q9D141 195 aa4.58□□□□□ -1.68
Ssx2ip-202ENSMUST00000106149 NebE9Q1W3 7152 aa4.56□□□□□ -1.68
Ssx2ip-202ENSMUST00000106149 Gm29735A0A1B0GT06 219 aa4.51□□□□□ -1.69
Ssx2ip-202ENSMUST00000106149 Krtap21-1Q925H4 128 aa4.46□□□□□ -1.69
Ssx2ip-202ENSMUST00000106149 Phgr1Q8K0G7 91 aa4.34□□□□□ -1.72
Ssx2ip-202ENSMUST00000106149 Gpr98Q8VHN7 6298 aaKnown RBP4.3□□□□□ -1.72
Ssx2ip-202ENSMUST00000106149 A0A286YCP9 139 aa4.29□□□□□ -1.72
Ssx2ip-202ENSMUST00000106149 Krtap6-2O08884 159 aa4.05□□□□□ -1.76
Ssx2ip-202ENSMUST00000106149 Krtap28-13A0A087WQP5 138 aa3.09□□□□□ -1.91
Ssx2ip-202ENSMUST00000106149 A030005K14RikA0A1Y7VNY1 122 aa3.08□□□□□ -1.92
Ssx2ip-202ENSMUST00000106149 Krtap28-10A0A1Y7VP58 119 aa3.01□□□□□ -1.93
Ssx2ip-202ENSMUST00000106149 Gm7544A0A1Y7VJ58 118 aa2.9□□□□□ -1.95
Ssx2ip-202ENSMUST00000106149 A030003K21RikA0A1Y7VIM3 128 aa2.84□□□□□ -1.95
Ssx2ip-202ENSMUST00000106149 A030014E15RikA0A1Y7VJV2 120 aa2.84□□□□□ -1.95
Ssx2ip-202ENSMUST00000106149 Krtap5-1Q64507 230 aa2.72□□□□□ -1.97
Ssx2ip-202ENSMUST00000106149 Gm6217A0A1Y7VJK9 128 aa2.62□□□□□ -1.99
Ssx2ip-202ENSMUST00000106149 Gm4559A4IF42 199 aa2.59□□□□□ -2
Retrieved 80 of 22,080 RNA–protein pairs in 84.4 ms