RNA–Protein interactions for RNA: ENSMUST00000102754.10

Pkp4-202, Transcript of Plakophilin-4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pkp4, Length 4,614 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-202ENSMUST00000102754 Krtap4-6Q3V4B7 195 aa5.53□□□□□ -1.52
Pkp4-202ENSMUST00000102754 Fsip2A2ARZ3 6995 aa5.5□□□□□ -1.53
Pkp4-202ENSMUST00000102754 Krtap4-2B1AQ85 167 aa5.44□□□□□ -1.54
Pkp4-202ENSMUST00000102754 Muc5bE9Q5I3 4800 aa5.39□□□□□ -1.55
Pkp4-202ENSMUST00000102754 SspoQ8CG65 4998 aa5.32□□□□□ -1.56
Pkp4-202ENSMUST00000102754 Gm11938Q9D3H4 131 aa5.31□□□□□ -1.56
Pkp4-202ENSMUST00000102754 Sprr2dO70555 85 aa5.29□□□□□ -1.56
Pkp4-202ENSMUST00000102754 ObscnA2AAJ9 8891 aaKnown RBP5.28□□□□□ -1.56
Pkp4-202ENSMUST00000102754 Sprr2fO70557 76 aa5.27□□□□□ -1.57
Pkp4-202ENSMUST00000102754 Krtap4-1Q3UUY3 169 aa5.27□□□□□ -1.57
Pkp4-202ENSMUST00000102754 Macf1Q9QXZ0 7354 aaKnown RBP5.2□□□□□ -1.58
Pkp4-202ENSMUST00000102754 Krtap4-9B1AQA9 244 aa5.19□□□□□ -1.58
Pkp4-202ENSMUST00000102754 2300003K06RikA2A4M0 262 aa5.14□□□□□ -1.59
Pkp4-202ENSMUST00000102754 Gm11564A2A4L9 201 aa5.14□□□□□ -1.59
Pkp4-202ENSMUST00000102754 Gm11563B1AQ90 168 aa5.14□□□□□ -1.59
Pkp4-202ENSMUST00000102754 Gm11595B1AQA7 289 aa5.14□□□□□ -1.59
Pkp4-202ENSMUST00000102754 Krtap4-8B1AQA8 209 aa5.14□□□□□ -1.59
Pkp4-202ENSMUST00000102754 Gm11596B1AQB0 205 aa5.11□□□□□ -1.59
Pkp4-202ENSMUST00000102754 Syne2Q6ZWQ0 6874 aaKnown RBP5.11□□□□□ -1.59
Pkp4-202ENSMUST00000102754 Gm11562A0PK51 136 aa5.1□□□□□ -1.59
Pkp4-202ENSMUST00000102754 Krtap31-1Q9D644 177 aa5.09□□□□□ -1.59
Pkp4-202ENSMUST00000102754 Krtap4-7Q9D732 168 aa5.06□□□□□ -1.6
Pkp4-202ENSMUST00000102754 Krtap4-13Q9D7P3 165 aa5.06□□□□□ -1.6
Pkp4-202ENSMUST00000102754 Sprr2hO70559 108 aa5.03□□□□□ -1.6
Pkp4-202ENSMUST00000102754 Lce1kJ3QP15 125 aa5.02□□□□□ -1.61
Pkp4-202ENSMUST00000102754 Lce1a1Q9CQH5 143 aa4.85□□□□□ -1.63
Pkp4-202ENSMUST00000102754 Krtap4-16Q91W93 202 aa4.82□□□□□ -1.64
Pkp4-202ENSMUST00000102754 DstQ91ZU6 7393 aaKnown RBP4.77□□□□□ -1.65
Pkp4-202ENSMUST00000102754 Mt3P28184 68 aa4.69□□□□□ -1.66
Pkp4-202ENSMUST00000102754 Muc19Q6PZE0 7524 aa4.58□□□□□ -1.68
Pkp4-202ENSMUST00000102754 NebE9Q1W3 7152 aa4.53□□□□□ -1.68
Pkp4-202ENSMUST00000102754 Gm11554B1AQB2 190 aa4.53□□□□□ -1.68
Pkp4-202ENSMUST00000102754 Krtap20-2E9Q0A8 60 aa4.44□□□□□ -1.7
Pkp4-202ENSMUST00000102754 Mt1P02802 61 aaKnown RBP4.41□□□□□ -1.7
Pkp4-202ENSMUST00000102754 Krtap6-3A0A087WQL6 57 aa4.4□□□□□ -1.71
Pkp4-202ENSMUST00000102754 Gm11555B1AQ89 175 aa4.39□□□□□ -1.71
Pkp4-202ENSMUST00000102754 Kmt2dQ6PDK2 5588 aa4.33□□□□□ -1.72
Pkp4-202ENSMUST00000102754 Sprr2bO70554 98 aa4.14□□□□□ -1.75
Pkp4-202ENSMUST00000102754 Eppk1Q8R0W0 6548 aa3.89□□□□□ -1.79
Pkp4-202ENSMUST00000102754 Gm11568A2A4M2 211 aa3.84□□□□□ -1.79
Pkp4-202ENSMUST00000102754 Krtap9-1Q64526 186 aa3.84□□□□□ -1.79
Pkp4-202ENSMUST00000102754 Gpr98Q8VHN7 6298 aaKnown RBP3.72□□□□□ -1.81
Pkp4-202ENSMUST00000102754 Krtap31-2Q8CAY5 177 aa3.7□□□□□ -1.82
Pkp4-202ENSMUST00000102754 1110025L11RikO09048 78 aa3.66□□□□□ -1.82
Pkp4-202ENSMUST00000102754 Krtap6-5Q925H3 78 aa3.66□□□□□ -1.82
Pkp4-202ENSMUST00000102754 Hmcn1D3YXG0 5634 aa3.59□□□□□ -1.84
Pkp4-202ENSMUST00000102754 Gm11639A0A1D5RLM8 5808 aa3.56□□□□□ -1.84
Pkp4-202ENSMUST00000102754 Krtap5-2Q9D5Z7 189 aa3.53□□□□□ -1.84
Pkp4-202ENSMUST00000102754 Gm11559Q9D3H7 191 aa3.52□□□□□ -1.85
Pkp4-202ENSMUST00000102754 Gm10229O08631 77 aa3.42□□□□□ -1.86
Pkp4-202ENSMUST00000102754 Gm10153A0A1B0GRL1 320 aa3.26□□□□□ -1.89
Pkp4-202ENSMUST00000102754 Gm4553A0A1B0GSA9 284 aa3.25□□□□□ -1.89
Pkp4-202ENSMUST00000102754 A0A1Y7VJH8 109 aa3.25□□□□□ -1.89
Pkp4-202ENSMUST00000102754 Phgr1Q8K0G7 91 aa3.25□□□□□ -1.89
Pkp4-202ENSMUST00000102754 A0A1Y7VLE6 161 aa3.21□□□□□ -1.9
Pkp4-202ENSMUST00000102754 Gm2431E9Q8S1 172 aa3.15□□□□□ -1.91
Pkp4-202ENSMUST00000102754 Gm45337A0A1B0GS71 263 aa3.04□□□□□ -1.92
Pkp4-202ENSMUST00000102754 AhnakE9Q616 5656 aaKnown RBP3□□□□□ -1.93
Pkp4-202ENSMUST00000102754 Krtap28-10A0A1Y7VP58 119 aa2.98□□□□□ -1.93
Pkp4-202ENSMUST00000102754 Gm40460A0A1B0GR10 244 aa2.95□□□□□ -1.94
Pkp4-202ENSMUST00000102754 Gm7579A0A1B0GRJ4 243 aa2.95□□□□□ -1.94
Pkp4-202ENSMUST00000102754 Krtap5-5Q2TA51 241 aa2.95□□□□□ -1.94
Pkp4-202ENSMUST00000102754 Krtap5-4Q62220 223 aa2.95□□□□□ -1.94
Pkp4-202ENSMUST00000102754 A030003K21RikA0A1Y7VIM3 128 aa2.86□□□□□ -1.95
Pkp4-202ENSMUST00000102754 Krtap28-13A0A087WQP5 138 aa2.81□□□□□ -1.96
Pkp4-202ENSMUST00000102754 A030005L19RikA0A1Y7VIU2 113 aa2.81□□□□□ -1.96
Pkp4-202ENSMUST00000102754 Krtap6-2O08884 159 aa2.8□□□□□ -1.96
Pkp4-202ENSMUST00000102754 Gm7544A0A1Y7VJ58 118 aa2.78□□□□□ -1.96
Pkp4-202ENSMUST00000102754 A030005K14RikA0A1Y7VNY1 122 aa2.75□□□□□ -1.97
Pkp4-202ENSMUST00000102754 Krtap21-1Q925H4 128 aa2.71□□□□□ -1.98
Pkp4-202ENSMUST00000102754 Gm39115A0A1B0GSH7 232 aa2.7□□□□□ -1.98
Pkp4-202ENSMUST00000102754 Gm6217A0A1Y7VJK9 128 aa2.66□□□□□ -1.98
Pkp4-202ENSMUST00000102754 A0A1Y7VJ07 166 aa2.6□□□□□ -1.99
Pkp4-202ENSMUST00000102754 Gm11567Q9D141 195 aa2.55□□□□□ -2
Pkp4-202ENSMUST00000102754 A030014E15RikA0A1Y7VJV2 120 aa2.37□□□□□ -2.03
Pkp4-202ENSMUST00000102754 Gm45618A0A1B0GSA0 219 aa2.24□□□□□ -2.05
Pkp4-202ENSMUST00000102754 Gm29735A0A1B0GT06 219 aa2.22□□□□□ -2.05
Pkp4-202ENSMUST00000102754 A0A286YCP9 139 aa1.97□□□□□ -2.09
Pkp4-202ENSMUST00000102754 Krtap5-1Q64507 230 aa1.54□□□□□ -2.16
Pkp4-202ENSMUST00000102754 Gm4559A4IF42 199 aa1.23□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 62.3 ms