RNA–Protein interactions for RNA: ENSMUST00000090823.7

Sema6c-202, Transcript of Semaphorin-6C, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sema6c, Length 4,029 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sema6c-202ENSMUST00000090823 Krtap4-13Q9D7P3 165 aa4.73□□□□□ -1.65
Sema6c-202ENSMUST00000090823 Lce1dQ9D731 133 aa4.69□□□□□ -1.66
Sema6c-202ENSMUST00000090823 Gm10100J3QK64 120 aa4.66□□□□□ -1.66
Sema6c-202ENSMUST00000090823 Macf1Q9QXZ0 7354 aaKnown RBP4.64□□□□□ -1.67
Sema6c-202ENSMUST00000090823 2300003K06RikA2A4M0 262 aa4.61□□□□□ -1.67
Sema6c-202ENSMUST00000090823 Lce3eF8VQJ0 98 aa4.6□□□□□ -1.67
Sema6c-202ENSMUST00000090823 Lce3fQ6PAI4 98 aa4.6□□□□□ -1.67
Sema6c-202ENSMUST00000090823 Krtap4-7Q9D732 168 aa4.58□□□□□ -1.68
Sema6c-202ENSMUST00000090823 Lce1bQ9D149 137 aa4.58□□□□□ -1.68
Sema6c-202ENSMUST00000090823 Gm11555B1AQ89 175 aa4.55□□□□□ -1.68
Sema6c-202ENSMUST00000090823 Sprr2iO70560 76 aa4.55□□□□□ -1.68
Sema6c-202ENSMUST00000090823 Lce1fB9EJP6 147 aa4.53□□□□□ -1.68
Sema6c-202ENSMUST00000090823 Lce1cQ9D1C5 147 aa4.53□□□□□ -1.68
Sema6c-202ENSMUST00000090823 Gm10142J3KMP7 120 aa4.52□□□□□ -1.69
Sema6c-202ENSMUST00000090823 Krtap6-3A0A087WQL6 57 aa4.5□□□□□ -1.69
Sema6c-202ENSMUST00000090823 Gm11938Q9D3H4 131 aa4.5□□□□□ -1.69
Sema6c-202ENSMUST00000090823 Lce3dE9Q8V1 98 aa4.49□□□□□ -1.69
Sema6c-202ENSMUST00000090823 Lce1eQ9D139 143 aa4.47□□□□□ -1.69
Sema6c-202ENSMUST00000090823 Krtap31-2Q8CAY5 177 aa4.45□□□□□ -1.7
Sema6c-202ENSMUST00000090823 Lce3aQ497I5 98 aa4.42□□□□□ -1.7
Sema6c-202ENSMUST00000090823 Lce1a1Q9CQH5 143 aa4.4□□□□□ -1.71
Sema6c-202ENSMUST00000090823 Sprr2dO70555 85 aa4.32□□□□□ -1.72
Sema6c-202ENSMUST00000090823 ObscnA2AAJ9 8891 aaKnown RBP4.27□□□□□ -1.73
Sema6c-202ENSMUST00000090823 Lce1kJ3QP15 125 aa4.2□□□□□ -1.74
Sema6c-202ENSMUST00000090823 Sprr2fO70557 76 aa4.18□□□□□ -1.74
Sema6c-202ENSMUST00000090823 Krtap19-4Q925H7 84 aa4.18□□□□□ -1.74
Sema6c-202ENSMUST00000090823 Sprr2eO70556 76 aa4.14□□□□□ -1.75
Sema6c-202ENSMUST00000090823 DstQ91ZU6 7393 aaKnown RBP4.12□□□□□ -1.75
Sema6c-202ENSMUST00000090823 Gm11554B1AQB2 190 aa4.12□□□□□ -1.75
Sema6c-202ENSMUST00000090823 Eppk1Q8R0W0 6548 aa4.12□□□□□ -1.75
Sema6c-202ENSMUST00000090823 Krtap4-16Q91W93 202 aa4.08□□□□□ -1.76
Sema6c-202ENSMUST00000090823 Krtap20-2E9Q0A8 60 aa4.05□□□□□ -1.76
Sema6c-202ENSMUST00000090823 NebE9Q1W3 7152 aa4.04□□□□□ -1.76
Sema6c-202ENSMUST00000090823 Muc19Q6PZE0 7524 aa4.01□□□□□ -1.77
Sema6c-202ENSMUST00000090823 Gm10024A0A0A0MQA4 119 aa3.99□□□□□ -1.77
Sema6c-202ENSMUST00000090823 Sprr2hO70559 108 aa3.93□□□□□ -1.78
Sema6c-202ENSMUST00000090823 Gpr98Q8VHN7 6298 aaKnown RBP3.84□□□□□ -1.79
Sema6c-202ENSMUST00000090823 Gm11639A0A1D5RLM8 5808 aa3.74□□□□□ -1.81
Sema6c-202ENSMUST00000090823 Mt1P02802 61 aaKnown RBP3.71□□□□□ -1.82
Sema6c-202ENSMUST00000090823 Mt3P28184 68 aa3.67□□□□□ -1.82
Sema6c-202ENSMUST00000090823 Gm11568A2A4M2 211 aa3.59□□□□□ -1.83
Sema6c-202ENSMUST00000090823 Krtap9-1Q64526 186 aa3.59□□□□□ -1.83
Sema6c-202ENSMUST00000090823 Kmt2dQ6PDK2 5588 aa3.56□□□□□ -1.84
Sema6c-202ENSMUST00000090823 Gm11559Q9D3H7 191 aa3.54□□□□□ -1.84
Sema6c-202ENSMUST00000090823 A0A1Y7VJH8 109 aa3.52□□□□□ -1.85
Sema6c-202ENSMUST00000090823 Krtap5-2Q9D5Z7 189 aa3.49□□□□□ -1.85
Sema6c-202ENSMUST00000090823 Hmcn1D3YXG0 5634 aa3.31□□□□□ -1.88
Sema6c-202ENSMUST00000090823 Gm10153A0A1B0GRL1 320 aa3.28□□□□□ -1.88
Sema6c-202ENSMUST00000090823 A030005L19RikA0A1Y7VIU2 113 aa3.23□□□□□ -1.89
Sema6c-202ENSMUST00000090823 Gm4553A0A1B0GSA9 284 aa3.22□□□□□ -1.89
Sema6c-202ENSMUST00000090823 Gm2431E9Q8S1 172 aa3.14□□□□□ -1.91
Sema6c-202ENSMUST00000090823 Gm45337A0A1B0GS71 263 aa3.14□□□□□ -1.91
Sema6c-202ENSMUST00000090823 Sprr2bO70554 98 aa3.1□□□□□ -1.91
Sema6c-202ENSMUST00000090823 A0A1Y7VLE6 161 aa3.07□□□□□ -1.92
Sema6c-202ENSMUST00000090823 Gm40460A0A1B0GR10 244 aa3.04□□□□□ -1.92
Sema6c-202ENSMUST00000090823 Gm7579A0A1B0GRJ4 243 aa3.04□□□□□ -1.92
Sema6c-202ENSMUST00000090823 Krtap5-5Q2TA51 241 aa3.04□□□□□ -1.92
Sema6c-202ENSMUST00000090823 Krtap5-4Q62220 223 aa3.04□□□□□ -1.92
Sema6c-202ENSMUST00000090823 AhnakE9Q616 5656 aaKnown RBP2.88□□□□□ -1.95
Sema6c-202ENSMUST00000090823 1110025L11RikO09048 78 aa2.87□□□□□ -1.95
Sema6c-202ENSMUST00000090823 Krtap6-5Q925H3 78 aa2.87□□□□□ -1.95
Sema6c-202ENSMUST00000090823 Gm39115A0A1B0GSH7 232 aa2.83□□□□□ -1.96
Sema6c-202ENSMUST00000090823 Gm10229O08631 77 aa2.65□□□□□ -1.98
Sema6c-202ENSMUST00000090823 Phgr1Q8K0G7 91 aa2.53□□□□□ -2
Sema6c-202ENSMUST00000090823 Gm45618A0A1B0GSA0 219 aa2.52□□□□□ -2.01
Sema6c-202ENSMUST00000090823 A0A1Y7VJ07 166 aa2.39□□□□□ -2.03
Sema6c-202ENSMUST00000090823 Gm11567Q9D141 195 aa2.38□□□□□ -2.03
Sema6c-202ENSMUST00000090823 Gm29735A0A1B0GT06 219 aa2.28□□□□□ -2.04
Sema6c-202ENSMUST00000090823 Krtap21-1Q925H4 128 aa2.28□□□□□ -2.04
Sema6c-202ENSMUST00000090823 Krtap6-2O08884 159 aa2.24□□□□□ -2.05
Sema6c-202ENSMUST00000090823 A0A286YCP9 139 aa2□□□□□ -2.09
Sema6c-202ENSMUST00000090823 Krtap5-1Q64507 230 aa1.77□□□□□ -2.13
Sema6c-202ENSMUST00000090823 A030003K21RikA0A1Y7VIM3 128 aa1.5□□□□□ -2.17
Sema6c-202ENSMUST00000090823 Gm4559A4IF42 199 aa1.31□□□□□ -2.2
Sema6c-202ENSMUST00000090823 Gm6217A0A1Y7VJK9 128 aa1.14□□□□□ -2.23
Sema6c-202ENSMUST00000090823 Krtap28-13A0A087WQP5 138 aa1.01□□□□□ -2.25
Sema6c-202ENSMUST00000090823 Krtap28-10A0A1Y7VP58 119 aa0.97□□□□□ -2.25
Sema6c-202ENSMUST00000090823 A030005K14RikA0A1Y7VNY1 122 aa0.61□□□□□ -2.31
Sema6c-202ENSMUST00000090823 A030014E15RikA0A1Y7VJV2 120 aa0.48□□□□□ -2.33
Sema6c-202ENSMUST00000090823 Gm7544A0A1Y7VJ58 118 aa0.35□□□□□ -2.35
Retrieved 80 of 22,080 RNA–protein pairs in 12.5 ms