RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 Fsip2A2ARZ3 6995 aa4.64□□□□□ -1.67
Nkx6-3-201ENSMUST00000071588 A0A1Y7VJ07 166 aa4.62□□□□□ -1.67
Nkx6-3-201ENSMUST00000071588 Krtap28-13A0A087WQP5 138 aa4.6□□□□□ -1.67
Nkx6-3-201ENSMUST00000071588 Gm7544A0A1Y7VJ58 118 aa4.6□□□□□ -1.67
Nkx6-3-201ENSMUST00000071588 Lce1cQ9D1C5 147 aa4.54□□□□□ -1.68
Nkx6-3-201ENSMUST00000071588 Krtap4-13Q9D7P3 165 aa4.54□□□□□ -1.68
Nkx6-3-201ENSMUST00000071588 Gm38119A0A0A6YX29 146 aa4.47□□□□□ -1.69
Nkx6-3-201ENSMUST00000071588 Sprr2kO70562 68 aa4.46□□□□□ -1.7
Nkx6-3-201ENSMUST00000071588 Lce1bQ9D149 137 aa4.45□□□□□ -1.7
Nkx6-3-201ENSMUST00000071588 Gm10272F7CZ33 110 aa4.44□□□□□ -1.7
Nkx6-3-201ENSMUST00000071588 Gm10100J3QK64 120 aa4.41□□□□□ -1.7
Nkx6-3-201ENSMUST00000071588 2300003K06RikA2A4M0 262 aa4.4□□□□□ -1.7
Nkx6-3-201ENSMUST00000071588 Lce1fB9EJP6 147 aa4.4□□□□□ -1.71
Nkx6-3-201ENSMUST00000071588 Lce1a1Q9CQH5 143 aa4.4□□□□□ -1.71
Nkx6-3-201ENSMUST00000071588 Krtap6-3A0A087WQL6 57 aa4.38□□□□□ -1.71
Nkx6-3-201ENSMUST00000071588 Sprr2fO70557 76 aa4.38□□□□□ -1.71
Nkx6-3-201ENSMUST00000071588 Gm10142J3KMP7 120 aa4.36□□□□□ -1.71
Nkx6-3-201ENSMUST00000071588 Lce1lQ9D1G7 135 aa4.33□□□□□ -1.72
Nkx6-3-201ENSMUST00000071588 Krtap19-4Q925H7 84 aa4.31□□□□□ -1.72
Nkx6-3-201ENSMUST00000071588 Sprr2eO70556 76 aa4.29□□□□□ -1.72
Nkx6-3-201ENSMUST00000071588 Lce3bQ9CQM7 98 aa4.27□□□□□ -1.73
Nkx6-3-201ENSMUST00000071588 A030003K21RikA0A1Y7VIM3 128 aa4.27□□□□□ -1.73
Nkx6-3-201ENSMUST00000071588 Gm6217A0A1Y7VJK9 128 aa4.27□□□□□ -1.73
Nkx6-3-201ENSMUST00000071588 Sprr2hO70559 108 aa4.24□□□□□ -1.73
Nkx6-3-201ENSMUST00000071588 Krtap31-2Q8CAY5 177 aa4.24□□□□□ -1.73
Nkx6-3-201ENSMUST00000071588 Lce3dE9Q8V1 98 aa4.18□□□□□ -1.74
Nkx6-3-201ENSMUST00000071588 Lce3cQ91V05 98 aa4.18□□□□□ -1.74
Nkx6-3-201ENSMUST00000071588 Syne1Q6ZWR6 8799 aa4.16□□□□□ -1.74
Nkx6-3-201ENSMUST00000071588 A030005K14RikA0A1Y7VNY1 122 aa4.15□□□□□ -1.75
Nkx6-3-201ENSMUST00000071588 Lce3eF8VQJ0 98 aa4.11□□□□□ -1.75
Nkx6-3-201ENSMUST00000071588 Lce3fQ6PAI4 98 aa4.11□□□□□ -1.75
Nkx6-3-201ENSMUST00000071588 Lce3aQ497I5 98 aa4.05□□□□□ -1.76
Nkx6-3-201ENSMUST00000071588 A0A1Y7VJH8 109 aa4.04□□□□□ -1.76
Nkx6-3-201ENSMUST00000071588 Krtap4-16Q91W93 202 aa4.03□□□□□ -1.76
Nkx6-3-201ENSMUST00000071588 Krtap20-2E9Q0A8 60 aa4.01□□□□□ -1.77
Nkx6-3-201ENSMUST00000071588 Lce1kJ3QP15 125 aa3.99□□□□□ -1.77
Nkx6-3-201ENSMUST00000071588 Krtap28-10A0A1Y7VP58 119 aa3.97□□□□□ -1.77
Nkx6-3-201ENSMUST00000071588 A030005L19RikA0A1Y7VIU2 113 aa3.89□□□□□ -1.79
Nkx6-3-201ENSMUST00000071588 Krtap5-2Q9D5Z7 189 aa3.86□□□□□ -1.79
Nkx6-3-201ENSMUST00000071588 Gm11568A2A4M2 211 aa3.85□□□□□ -1.79
Nkx6-3-201ENSMUST00000071588 Krtap9-1Q64526 186 aa3.85□□□□□ -1.79
Nkx6-3-201ENSMUST00000071588 ObscnA2AAJ9 8891 aaKnown RBP3.82□□□□□ -1.8
Nkx6-3-201ENSMUST00000071588 Mt1P02802 61 aaKnown RBP3.8□□□□□ -1.8
Nkx6-3-201ENSMUST00000071588 Gm11559Q9D3H7 191 aa3.75□□□□□ -1.81
Nkx6-3-201ENSMUST00000071588 Gm11554B1AQB2 190 aa3.73□□□□□ -1.81
Nkx6-3-201ENSMUST00000071588 Macf1Q9QXZ0 7354 aaKnown RBP3.72□□□□□ -1.81
Nkx6-3-201ENSMUST00000071588 Gm4553A0A1B0GSA9 284 aa3.65□□□□□ -1.83
Nkx6-3-201ENSMUST00000071588 Eppk1Q8R0W0 6548 aa3.64□□□□□ -1.83
Nkx6-3-201ENSMUST00000071588 A030014E15RikA0A1Y7VJV2 120 aa3.64□□□□□ -1.83
Nkx6-3-201ENSMUST00000071588 Gm10153A0A1B0GRL1 320 aa3.59□□□□□ -1.83
Nkx6-3-201ENSMUST00000071588 Gm10024A0A0A0MQA4 119 aa3.58□□□□□ -1.84
Nkx6-3-201ENSMUST00000071588 Gm2431E9Q8S1 172 aa3.57□□□□□ -1.84
Nkx6-3-201ENSMUST00000071588 Kmt2dQ6PDK2 5588 aa3.55□□□□□ -1.84
Nkx6-3-201ENSMUST00000071588 Gm45337A0A1B0GS71 263 aa3.52□□□□□ -1.85
Nkx6-3-201ENSMUST00000071588 Hmcn1D3YXG0 5634 aa3.48□□□□□ -1.85
Nkx6-3-201ENSMUST00000071588 Mt3P28184 68 aa3.44□□□□□ -1.86
Nkx6-3-201ENSMUST00000071588 Gm40460A0A1B0GR10 244 aa3.4□□□□□ -1.86
Nkx6-3-201ENSMUST00000071588 Gm7579A0A1B0GRJ4 243 aa3.4□□□□□ -1.86
Nkx6-3-201ENSMUST00000071588 Krtap5-5Q2TA51 241 aa3.4□□□□□ -1.86
Nkx6-3-201ENSMUST00000071588 Krtap5-4Q62220 223 aa3.4□□□□□ -1.86
Nkx6-3-201ENSMUST00000071588 Gm11639A0A1D5RLM8 5808 aa3.4□□□□□ -1.87
Nkx6-3-201ENSMUST00000071588 Muc19Q6PZE0 7524 aa3.39□□□□□ -1.87
Nkx6-3-201ENSMUST00000071588 Gm39115A0A1B0GSH7 232 aa3.29□□□□□ -1.88
Nkx6-3-201ENSMUST00000071588 DstQ91ZU6 7393 aaKnown RBP3.27□□□□□ -1.89
Nkx6-3-201ENSMUST00000071588 Gpr98Q8VHN7 6298 aaKnown RBP3.2□□□□□ -1.9
Nkx6-3-201ENSMUST00000071588 Muc16A0A140LJ72 8478 aa3.18□□□□□ -1.9
Nkx6-3-201ENSMUST00000071588 NebE9Q1W3 7152 aa3.11□□□□□ -1.91
Nkx6-3-201ENSMUST00000071588 Gm45618A0A1B0GSA0 219 aa3.06□□□□□ -1.92
Nkx6-3-201ENSMUST00000071588 AhnakE9Q616 5656 aaKnown RBP3.03□□□□□ -1.92
Nkx6-3-201ENSMUST00000071588 1110025L11RikO09048 78 aa2.84□□□□□ -1.95
Nkx6-3-201ENSMUST00000071588 Krtap6-5Q925H3 78 aa2.84□□□□□ -1.95
Nkx6-3-201ENSMUST00000071588 Sprr2bO70554 98 aa2.7□□□□□ -1.98
Nkx6-3-201ENSMUST00000071588 Gm29735A0A1B0GT06 219 aa2.54□□□□□ -2
Nkx6-3-201ENSMUST00000071588 Gm10229O08631 77 aa2.52□□□□□ -2.01
Nkx6-3-201ENSMUST00000071588 Gm11567Q9D141 195 aa2.52□□□□□ -2.01
Nkx6-3-201ENSMUST00000071588 Phgr1Q8K0G7 91 aa2.48□□□□□ -2.01
Nkx6-3-201ENSMUST00000071588 Krtap21-1Q925H4 128 aa2.33□□□□□ -2.04
Nkx6-3-201ENSMUST00000071588 Krtap6-2O08884 159 aa2.18□□□□□ -2.06
Nkx6-3-201ENSMUST00000071588 Krtap5-1Q64507 230 aa1.87□□□□□ -2.11
Nkx6-3-201ENSMUST00000071588 Gm4559A4IF42 199 aa1.6□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 113 ms