RNA–Protein interactions for RNA: ENSMUST00000050029.7

Six1-201, Transcript of Homeobox protein SIX1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Six1, Length 3,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six1-201ENSMUST00000050029 Sprr2fO70557 76 aa5.06□□□□□ -1.6
Six1-201ENSMUST00000050029 Krtap4-9B1AQA9 244 aa5□□□□□ -1.61
Six1-201ENSMUST00000050029 Gm10024A0A0A0MQA4 119 aa4.96□□□□□ -1.62
Six1-201ENSMUST00000050029 Syne1Q6ZWR6 8799 aa4.95□□□□□ -1.62
Six1-201ENSMUST00000050029 Krtap4-7Q9D732 168 aa4.93□□□□□ -1.62
Six1-201ENSMUST00000050029 Krtap4-13Q9D7P3 165 aa4.87□□□□□ -1.63
Six1-201ENSMUST00000050029 Sprr2kO70562 68 aa4.85□□□□□ -1.63
Six1-201ENSMUST00000050029 Sprr2dO70555 85 aa4.8□□□□□ -1.64
Six1-201ENSMUST00000050029 Krtap4-16Q91W93 202 aa4.77□□□□□ -1.65
Six1-201ENSMUST00000050029 Gm10100J3QK64 120 aa4.72□□□□□ -1.65
Six1-201ENSMUST00000050029 Lce1lQ9D1G7 135 aa4.72□□□□□ -1.65
Six1-201ENSMUST00000050029 Lce3bQ9CQM7 98 aa4.69□□□□□ -1.66
Six1-201ENSMUST00000050029 Gm10142J3KMP7 120 aa4.68□□□□□ -1.66
Six1-201ENSMUST00000050029 Lce1bQ9D149 137 aa4.66□□□□□ -1.66
Six1-201ENSMUST00000050029 Sprr2eO70556 76 aa4.62□□□□□ -1.67
Six1-201ENSMUST00000050029 Lce1cQ9D1C5 147 aa4.61□□□□□ -1.67
Six1-201ENSMUST00000050029 Gm11568A2A4M2 211 aa4.5□□□□□ -1.69
Six1-201ENSMUST00000050029 Macf1Q9QXZ0 7354 aaKnown RBP4.49□□□□□ -1.69
Six1-201ENSMUST00000050029 Lce1kJ3QP15 125 aa4.49□□□□□ -1.69
Six1-201ENSMUST00000050029 Lce1fB9EJP6 147 aa4.46□□□□□ -1.7
Six1-201ENSMUST00000050029 Lce3dE9Q8V1 98 aa4.46□□□□□ -1.7
Six1-201ENSMUST00000050029 Krtap19-4Q925H7 84 aa4.46□□□□□ -1.7
Six1-201ENSMUST00000050029 Lce1a1Q9CQH5 143 aa4.46□□□□□ -1.7
Six1-201ENSMUST00000050029 Lce3cQ91V05 98 aa4.45□□□□□ -1.7
Six1-201ENSMUST00000050029 Lce3eF8VQJ0 98 aa4.39□□□□□ -1.71
Six1-201ENSMUST00000050029 Lce3fQ6PAI4 98 aa4.39□□□□□ -1.71
Six1-201ENSMUST00000050029 ObscnA2AAJ9 8891 aaKnown RBP4.37□□□□□ -1.71
Six1-201ENSMUST00000050029 Sprr2hO70559 108 aa4.36□□□□□ -1.71
Six1-201ENSMUST00000050029 Krtap20-2E9Q0A8 60 aa4.36□□□□□ -1.71
Six1-201ENSMUST00000050029 Lce3aQ497I5 98 aa4.34□□□□□ -1.71
Six1-201ENSMUST00000050029 Krtap6-3A0A087WQL6 57 aa4.27□□□□□ -1.73
Six1-201ENSMUST00000050029 A0A1Y7VJH8 109 aa4.25□□□□□ -1.73
Six1-201ENSMUST00000050029 Krtap9-1Q64526 186 aa4.2□□□□□ -1.74
Six1-201ENSMUST00000050029 Muc16A0A140LJ72 8478 aa4.15□□□□□ -1.75
Six1-201ENSMUST00000050029 Mt1P02802 61 aaKnown RBP4.14□□□□□ -1.75
Six1-201ENSMUST00000050029 Krtap28-10A0A1Y7VP58 119 aa4.1□□□□□ -1.75
Six1-201ENSMUST00000050029 Gm11554B1AQB2 190 aa4.04□□□□□ -1.76
Six1-201ENSMUST00000050029 Kmt2dQ6PDK2 5588 aa4.01□□□□□ -1.77
Six1-201ENSMUST00000050029 Gm11559Q9D3H7 191 aa3.98□□□□□ -1.77
Six1-201ENSMUST00000050029 Krtap5-2Q9D5Z7 189 aa3.96□□□□□ -1.77
Six1-201ENSMUST00000050029 A0A1Y7VLE6 161 aa3.95□□□□□ -1.78
Six1-201ENSMUST00000050029 Hmcn1D3YXG0 5634 aa3.92□□□□□ -1.78
Six1-201ENSMUST00000050029 Krtap28-13A0A087WQP5 138 aa3.88□□□□□ -1.79
Six1-201ENSMUST00000050029 Muc19Q6PZE0 7524 aa3.88□□□□□ -1.79
Six1-201ENSMUST00000050029 A030005L19RikA0A1Y7VIU2 113 aa3.84□□□□□ -1.79
Six1-201ENSMUST00000050029 A030005K14RikA0A1Y7VNY1 122 aa3.75□□□□□ -1.81
Six1-201ENSMUST00000050029 Gm10153A0A1B0GRL1 320 aa3.73□□□□□ -1.81
Six1-201ENSMUST00000050029 Mt3P28184 68 aa3.71□□□□□ -1.82
Six1-201ENSMUST00000050029 DstQ91ZU6 7393 aaKnown RBP3.7□□□□□ -1.82
Six1-201ENSMUST00000050029 Gm7544A0A1Y7VJ58 118 aa3.7□□□□□ -1.82
Six1-201ENSMUST00000050029 Gm4553A0A1B0GSA9 284 aa3.67□□□□□ -1.82
Six1-201ENSMUST00000050029 Gm2431E9Q8S1 172 aa3.65□□□□□ -1.83
Six1-201ENSMUST00000050029 NebE9Q1W3 7152 aa3.59□□□□□ -1.83
Six1-201ENSMUST00000050029 Gm45337A0A1B0GS71 263 aa3.55□□□□□ -1.84
Six1-201ENSMUST00000050029 Eppk1Q8R0W0 6548 aa3.5□□□□□ -1.85
Six1-201ENSMUST00000050029 Gm11639A0A1D5RLM8 5808 aa3.45□□□□□ -1.86
Six1-201ENSMUST00000050029 Gm40460A0A1B0GR10 244 aa3.4□□□□□ -1.87
Six1-201ENSMUST00000050029 Gm7579A0A1B0GRJ4 243 aa3.4□□□□□ -1.87
Six1-201ENSMUST00000050029 Krtap5-5Q2TA51 241 aa3.4□□□□□ -1.87
Six1-201ENSMUST00000050029 Krtap5-4Q62220 223 aa3.4□□□□□ -1.87
Six1-201ENSMUST00000050029 A0A1Y7VJ07 166 aa3.35□□□□□ -1.87
Six1-201ENSMUST00000050029 A030003K21RikA0A1Y7VIM3 128 aa3.25□□□□□ -1.89
Six1-201ENSMUST00000050029 Gm6217A0A1Y7VJK9 128 aa3.25□□□□□ -1.89
Six1-201ENSMUST00000050029 Gm39115A0A1B0GSH7 232 aa3.2□□□□□ -1.9
Six1-201ENSMUST00000050029 A030014E15RikA0A1Y7VJV2 120 aa3.2□□□□□ -1.9
Six1-201ENSMUST00000050029 A0A286YCP9 139 aa3.2□□□□□ -1.9
Six1-201ENSMUST00000050029 Gpr98Q8VHN7 6298 aaKnown RBP3.12□□□□□ -1.91
Six1-201ENSMUST00000050029 AhnakE9Q616 5656 aaKnown RBP3.12□□□□□ -1.91
Six1-201ENSMUST00000050029 1110025L11RikO09048 78 aa3.09□□□□□ -1.92
Six1-201ENSMUST00000050029 Krtap6-5Q925H3 78 aa3.09□□□□□ -1.92
Six1-201ENSMUST00000050029 Gm11567Q9D141 195 aa3.06□□□□□ -1.92
Six1-201ENSMUST00000050029 Sprr2bO70554 98 aa2.98□□□□□ -1.93
Six1-201ENSMUST00000050029 Gm45618A0A1B0GSA0 219 aa2.76□□□□□ -1.97
Six1-201ENSMUST00000050029 Gm10229O08631 77 aa2.76□□□□□ -1.97
Six1-201ENSMUST00000050029 Phgr1Q8K0G7 91 aa2.75□□□□□ -1.97
Six1-201ENSMUST00000050029 Gm29735A0A1B0GT06 219 aa2.52□□□□□ -2.01
Six1-201ENSMUST00000050029 Krtap21-1Q925H4 128 aa2.5□□□□□ -2.01
Six1-201ENSMUST00000050029 Krtap6-2O08884 159 aa2.38□□□□□ -2.03
Six1-201ENSMUST00000050029 Krtap5-1Q64507 230 aa1.81□□□□□ -2.12
Six1-201ENSMUST00000050029 Gm4559A4IF42 199 aa1.52□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 6.5 ms