RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 2310046K23RikA0A0A6YVW6 87 aa7.63□□□□□ -1.19
Ssbp4-201ENSMUST00000049908 Krtap5-2Q9D5Z7 189 aa7.49□□□□□ -1.21
Ssbp4-201ENSMUST00000049908 Sprr2iO70560 76 aa7.41□□□□□ -1.22
Ssbp4-201ENSMUST00000049908 Lce1kJ3QP15 125 aa7.39□□□□□ -1.23
Ssbp4-201ENSMUST00000049908 Tnp1P10856 55 aa7.39□□□□□ -1.23
Ssbp4-201ENSMUST00000049908 Syne1Q6ZWR6 8799 aa7.34□□□□□ -1.23
Ssbp4-201ENSMUST00000049908 Ndufaf8A2AMZ4 74 aa7.33□□□□□ -1.24
Ssbp4-201ENSMUST00000049908 Gm11559Q9D3H7 191 aa7.31□□□□□ -1.24
Ssbp4-201ENSMUST00000049908 Lce3bQ9CQM7 98 aa7.25□□□□□ -1.25
Ssbp4-201ENSMUST00000049908 Eppk1Q8R0W0 6548 aa7.23□□□□□ -1.25
Ssbp4-201ENSMUST00000049908 Gm10272F7CZ33 110 aa7.23□□□□□ -1.25
Ssbp4-201ENSMUST00000049908 A030005L19RikA0A1Y7VIU2 113 aa7.2□□□□□ -1.26
Ssbp4-201ENSMUST00000049908 Gm11568A2A4M2 211 aa7.17□□□□□ -1.26
Ssbp4-201ENSMUST00000049908 Krtap9-1Q64526 186 aa7.17□□□□□ -1.26
Ssbp4-201ENSMUST00000049908 Gm4553A0A1B0GSA9 284 aa7.15□□□□□ -1.27
Ssbp4-201ENSMUST00000049908 Gm11554B1AQB2 190 aa7.11□□□□□ -1.27
Ssbp4-201ENSMUST00000049908 Macf1Q9QXZ0 7354 aaKnown RBP7.06□□□□□ -1.28
Ssbp4-201ENSMUST00000049908 Kmt2dQ6PDK2 5588 aa6.99□□□□□ -1.29
Ssbp4-201ENSMUST00000049908 Lce1fB9EJP6 147 aa6.94□□□□□ -1.3
Ssbp4-201ENSMUST00000049908 Lce1cQ9D1C5 147 aa6.94□□□□□ -1.3
Ssbp4-201ENSMUST00000049908 Gm2431E9Q8S1 172 aa6.91□□□□□ -1.3
Ssbp4-201ENSMUST00000049908 Gm45337A0A1B0GS71 263 aa6.85□□□□□ -1.31
Ssbp4-201ENSMUST00000049908 Gm11938Q9D3H4 131 aa6.79□□□□□ -1.32
Ssbp4-201ENSMUST00000049908 Gm11639A0A1D5RLM8 5808 aa6.77□□□□□ -1.33
Ssbp4-201ENSMUST00000049908 Gm10153A0A1B0GRL1 320 aa6.71□□□□□ -1.34
Ssbp4-201ENSMUST00000049908 Mt1P02802 61 aaKnown RBP6.7□□□□□ -1.34
Ssbp4-201ENSMUST00000049908 Krtap19-4Q925H7 84 aa6.65□□□□□ -1.35
Ssbp4-201ENSMUST00000049908 Gm40460A0A1B0GR10 244 aa6.62□□□□□ -1.35
Ssbp4-201ENSMUST00000049908 Gm7579A0A1B0GRJ4 243 aa6.62□□□□□ -1.35
Ssbp4-201ENSMUST00000049908 Krtap5-5Q2TA51 241 aa6.62□□□□□ -1.35
Ssbp4-201ENSMUST00000049908 Krtap5-4Q62220 223 aa6.62□□□□□ -1.35
Ssbp4-201ENSMUST00000049908 Muc19Q6PZE0 7524 aa6.58□□□□□ -1.36
Ssbp4-201ENSMUST00000049908 Hmcn1D3YXG0 5634 aa6.57□□□□□ -1.36
Ssbp4-201ENSMUST00000049908 Gm9112A2AI92 75 aa6.53□□□□□ -1.36
Ssbp4-201ENSMUST00000049908 Gm39115A0A1B0GSH7 232 aa6.49□□□□□ -1.37
Ssbp4-201ENSMUST00000049908 Lce3cQ91V05 98 aa6.49□□□□□ -1.37
Ssbp4-201ENSMUST00000049908 Lce3dE9Q8V1 98 aa6.39□□□□□ -1.39
Ssbp4-201ENSMUST00000049908 Gpr98Q8VHN7 6298 aaKnown RBP6.38□□□□□ -1.39
Ssbp4-201ENSMUST00000049908 DstQ91ZU6 7393 aaKnown RBP6.33□□□□□ -1.4
Ssbp4-201ENSMUST00000049908 Sprr2dO70555 85 aa6.3□□□□□ -1.4
Ssbp4-201ENSMUST00000049908 ObscnA2AAJ9 8891 aaKnown RBP6.24□□□□□ -1.41
Ssbp4-201ENSMUST00000049908 Lce3eF8VQJ0 98 aa6.23□□□□□ -1.41
Ssbp4-201ENSMUST00000049908 Lce3fQ6PAI4 98 aa6.23□□□□□ -1.41
Ssbp4-201ENSMUST00000049908 Mt3P28184 68 aa6.2□□□□□ -1.42
Ssbp4-201ENSMUST00000049908 4933428G20RikQ9D3X4 101 aa6.18□□□□□ -1.42
Ssbp4-201ENSMUST00000049908 Krtap4-16Q91W93 202 aa6.09□□□□□ -1.44
Ssbp4-201ENSMUST00000049908 NebE9Q1W3 7152 aa6.07□□□□□ -1.44
Ssbp4-201ENSMUST00000049908 Gm45618A0A1B0GSA0 219 aa6.04□□□□□ -1.44
Ssbp4-201ENSMUST00000049908 Sprr2fO70557 76 aa6.01□□□□□ -1.45
Ssbp4-201ENSMUST00000049908 Lce3aQ497I5 98 aa5.96□□□□□ -1.45
Ssbp4-201ENSMUST00000049908 AhnakE9Q616 5656 aaKnown RBP5.89□□□□□ -1.47
Ssbp4-201ENSMUST00000049908 A0A1Y7VLE6 161 aa5.89□□□□□ -1.47
Ssbp4-201ENSMUST00000049908 Gm10100J3QK64 120 aa5.88□□□□□ -1.47
Ssbp4-201ENSMUST00000049908 Gm10142J3KMP7 120 aa5.58□□□□□ -1.52
Ssbp4-201ENSMUST00000049908 Sprr2eO70556 76 aa5.45□□□□□ -1.54
Ssbp4-201ENSMUST00000049908 Sprr2hO70559 108 aa5.44□□□□□ -1.54
Ssbp4-201ENSMUST00000049908 Gm10024A0A0A0MQA4 119 aa5.31□□□□□ -1.56
Ssbp4-201ENSMUST00000049908 A0A1Y7VJ07 166 aa4.97□□□□□ -1.61
Ssbp4-201ENSMUST00000049908 Muc16A0A140LJ72 8478 aa4.91□□□□□ -1.62
Ssbp4-201ENSMUST00000049908 Gm29735A0A1B0GT06 219 aa4.88□□□□□ -1.63
Ssbp4-201ENSMUST00000049908 Krtap31-1Q9D644 177 aa4.87□□□□□ -1.63
Ssbp4-201ENSMUST00000049908 1110025L11RikO09048 78 aa4.81□□□□□ -1.64
Ssbp4-201ENSMUST00000049908 Krtap6-5Q925H3 78 aa4.81□□□□□ -1.64
Ssbp4-201ENSMUST00000049908 Gm11567Q9D141 195 aa4.57□□□□□ -1.68
Ssbp4-201ENSMUST00000049908 Krtap31-2Q8CAY5 177 aa4.51□□□□□ -1.69
Ssbp4-201ENSMUST00000049908 Gm10229O08631 77 aa4.32□□□□□ -1.72
Ssbp4-201ENSMUST00000049908 A0A286YCP9 139 aa4.27□□□□□ -1.73
Ssbp4-201ENSMUST00000049908 Gm7544A0A1Y7VJ58 118 aa4.18□□□□□ -1.74
Ssbp4-201ENSMUST00000049908 Krtap28-13A0A087WQP5 138 aa4.1□□□□□ -1.75
Ssbp4-201ENSMUST00000049908 A030005K14RikA0A1Y7VNY1 122 aa3.96□□□□□ -1.78
Ssbp4-201ENSMUST00000049908 A030003K21RikA0A1Y7VIM3 128 aa3.91□□□□□ -1.78
Ssbp4-201ENSMUST00000049908 Gm6217A0A1Y7VJK9 128 aa3.91□□□□□ -1.78
Ssbp4-201ENSMUST00000049908 Krtap21-1Q925H4 128 aa3.88□□□□□ -1.79
Ssbp4-201ENSMUST00000049908 Krtap28-10A0A1Y7VP58 119 aa3.86□□□□□ -1.79
Ssbp4-201ENSMUST00000049908 Sprr2bO70554 98 aa3.86□□□□□ -1.79
Ssbp4-201ENSMUST00000049908 Krtap6-2O08884 159 aa3.86□□□□□ -1.79
Ssbp4-201ENSMUST00000049908 Krtap5-1Q64507 230 aa3.7□□□□□ -1.82
Ssbp4-201ENSMUST00000049908 A030014E15RikA0A1Y7VJV2 120 aa3.48□□□□□ -1.85
Ssbp4-201ENSMUST00000049908 Phgr1Q8K0G7 91 aa3.27□□□□□ -1.89
Ssbp4-201ENSMUST00000049908 Gm4559A4IF42 199 aa2.82□□□□□ -1.96
Retrieved 80 of 22,080 RNA–protein pairs in 75.4 ms