RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Lce1a1Q9CQH5 143 aa4.32□□□□□ -1.72
Lime1-201ENSMUST00000048077 Syne1Q6ZWR6 8799 aa4.31□□□□□ -1.72
Lime1-201ENSMUST00000048077 Krtap4-9B1AQA9 244 aa4.28□□□□□ -1.72
Lime1-201ENSMUST00000048077 Fsip2A2ARZ3 6995 aa4.26□□□□□ -1.73
Lime1-201ENSMUST00000048077 Sprr2hO70559 108 aa4.22□□□□□ -1.73
Lime1-201ENSMUST00000048077 Sprr2iO70560 76 aa4.22□□□□□ -1.73
Lime1-201ENSMUST00000048077 Lce3cQ91V05 98 aa4.19□□□□□ -1.74
Lime1-201ENSMUST00000048077 Lce1bQ9D149 137 aa4.18□□□□□ -1.74
Lime1-201ENSMUST00000048077 Krtap6-3A0A087WQL6 57 aa4.17□□□□□ -1.74
Lime1-201ENSMUST00000048077 Mt4P47945 62 aa4.17□□□□□ -1.74
Lime1-201ENSMUST00000048077 Krtap31-1Q9D644 177 aa4.17□□□□□ -1.74
Lime1-201ENSMUST00000048077 Lce3dE9Q8V1 98 aa4.16□□□□□ -1.74
Lime1-201ENSMUST00000048077 Lce3eF8VQJ0 98 aa4.16□□□□□ -1.74
Lime1-201ENSMUST00000048077 Lce3fQ6PAI4 98 aa4.16□□□□□ -1.74
Lime1-201ENSMUST00000048077 Sprr2eO70556 76 aa4.14□□□□□ -1.75
Lime1-201ENSMUST00000048077 Sprr2kO70562 68 aa4.13□□□□□ -1.75
Lime1-201ENSMUST00000048077 Krtap4-13Q9D7P3 165 aa4.13□□□□□ -1.75
Lime1-201ENSMUST00000048077 Gm38119A0A0A6YX29 146 aa4.07□□□□□ -1.76
Lime1-201ENSMUST00000048077 ObscnA2AAJ9 8891 aaKnown RBP4.06□□□□□ -1.76
Lime1-201ENSMUST00000048077 2300003K06RikA2A4M0 262 aa4.05□□□□□ -1.76
Lime1-201ENSMUST00000048077 Lce3aQ497I5 98 aa4.01□□□□□ -1.77
Lime1-201ENSMUST00000048077 Lce1lQ9D1G7 135 aa4.01□□□□□ -1.77
Lime1-201ENSMUST00000048077 Sprr2fO70557 76 aa4□□□□□ -1.77
Lime1-201ENSMUST00000048077 Mt1P02802 61 aaKnown RBP3.98□□□□□ -1.77
Lime1-201ENSMUST00000048077 Lce1kJ3QP15 125 aa3.87□□□□□ -1.79
Lime1-201ENSMUST00000048077 Krtap4-7Q9D732 168 aa3.87□□□□□ -1.79
Lime1-201ENSMUST00000048077 Krtap31-2Q8CAY5 177 aa3.85□□□□□ -1.79
Lime1-201ENSMUST00000048077 Krtap20-2E9Q0A8 60 aa3.81□□□□□ -1.8
Lime1-201ENSMUST00000048077 A0A1Y7VJH8 109 aa3.8□□□□□ -1.8
Lime1-201ENSMUST00000048077 Gm11568A2A4M2 211 aa3.76□□□□□ -1.81
Lime1-201ENSMUST00000048077 Krtap9-1Q64526 186 aa3.76□□□□□ -1.81
Lime1-201ENSMUST00000048077 Eppk1Q8R0W0 6548 aa3.74□□□□□ -1.81
Lime1-201ENSMUST00000048077 Krtap5-2Q9D5Z7 189 aa3.72□□□□□ -1.81
Lime1-201ENSMUST00000048077 Gm11639A0A1D5RLM8 5808 aa3.62□□□□□ -1.83
Lime1-201ENSMUST00000048077 Gm10153A0A1B0GRL1 320 aa3.62□□□□□ -1.83
Lime1-201ENSMUST00000048077 Krtap4-16Q91W93 202 aa3.57□□□□□ -1.84
Lime1-201ENSMUST00000048077 Gm10024A0A0A0MQA4 119 aa3.54□□□□□ -1.84
Lime1-201ENSMUST00000048077 Mt3P28184 68 aa3.52□□□□□ -1.85
Lime1-201ENSMUST00000048077 A0A1Y7VLE6 161 aa3.51□□□□□ -1.85
Lime1-201ENSMUST00000048077 Macf1Q9QXZ0 7354 aaKnown RBP3.48□□□□□ -1.85
Lime1-201ENSMUST00000048077 A030005L19RikA0A1Y7VIU2 113 aa3.47□□□□□ -1.85
Lime1-201ENSMUST00000048077 Gpr98Q8VHN7 6298 aaKnown RBP3.46□□□□□ -1.86
Lime1-201ENSMUST00000048077 Gm11559Q9D3H7 191 aa3.43□□□□□ -1.86
Lime1-201ENSMUST00000048077 Gm11554B1AQB2 190 aa3.43□□□□□ -1.86
Lime1-201ENSMUST00000048077 Gm45337A0A1B0GS71 263 aa3.42□□□□□ -1.86
Lime1-201ENSMUST00000048077 Kmt2dQ6PDK2 5588 aa3.41□□□□□ -1.86
Lime1-201ENSMUST00000048077 Gm4553A0A1B0GSA9 284 aa3.4□□□□□ -1.87
Lime1-201ENSMUST00000048077 Gm40460A0A1B0GR10 244 aa3.33□□□□□ -1.88
Lime1-201ENSMUST00000048077 Gm7579A0A1B0GRJ4 243 aa3.33□□□□□ -1.88
Lime1-201ENSMUST00000048077 Krtap5-5Q2TA51 241 aa3.33□□□□□ -1.88
Lime1-201ENSMUST00000048077 Krtap5-4Q62220 223 aa3.33□□□□□ -1.88
Lime1-201ENSMUST00000048077 Muc19Q6PZE0 7524 aa3.33□□□□□ -1.88
Lime1-201ENSMUST00000048077 Gm2431E9Q8S1 172 aa3.25□□□□□ -1.89
Lime1-201ENSMUST00000048077 Hmcn1D3YXG0 5634 aa3.24□□□□□ -1.89
Lime1-201ENSMUST00000048077 1110025L11RikO09048 78 aa3.08□□□□□ -1.92
Lime1-201ENSMUST00000048077 Krtap6-5Q925H3 78 aa3.08□□□□□ -1.92
Lime1-201ENSMUST00000048077 DstQ91ZU6 7393 aaKnown RBP3.08□□□□□ -1.92
Lime1-201ENSMUST00000048077 NebE9Q1W3 7152 aa3.07□□□□□ -1.92
Lime1-201ENSMUST00000048077 Gm39115A0A1B0GSH7 232 aa3.03□□□□□ -1.92
Lime1-201ENSMUST00000048077 Muc16A0A140LJ72 8478 aa3.02□□□□□ -1.93
Lime1-201ENSMUST00000048077 Sprr2bO70554 98 aa2.92□□□□□ -1.94
Lime1-201ENSMUST00000048077 Gm45618A0A1B0GSA0 219 aa2.88□□□□□ -1.95
Lime1-201ENSMUST00000048077 AhnakE9Q616 5656 aaKnown RBP2.86□□□□□ -1.95
Lime1-201ENSMUST00000048077 A0A1Y7VJ07 166 aa2.78□□□□□ -1.96
Lime1-201ENSMUST00000048077 Gm10229O08631 77 aa2.71□□□□□ -1.98
Lime1-201ENSMUST00000048077 Gm29735A0A1B0GT06 219 aa2.54□□□□□ -2
Lime1-201ENSMUST00000048077 Krtap21-1Q925H4 128 aa2.54□□□□□ -2
Lime1-201ENSMUST00000048077 Gm11567Q9D141 195 aa2.52□□□□□ -2.01
Lime1-201ENSMUST00000048077 Phgr1Q8K0G7 91 aa2.48□□□□□ -2.01
Lime1-201ENSMUST00000048077 A0A286YCP9 139 aa2.46□□□□□ -2.02
Lime1-201ENSMUST00000048077 Krtap28-10A0A1Y7VP58 119 aa2.41□□□□□ -2.02
Lime1-201ENSMUST00000048077 Krtap28-13A0A087WQP5 138 aa2.35□□□□□ -2.03
Lime1-201ENSMUST00000048077 A030005K14RikA0A1Y7VNY1 122 aa2.29□□□□□ -2.04
Lime1-201ENSMUST00000048077 Krtap6-2O08884 159 aa2.27□□□□□ -2.05
Lime1-201ENSMUST00000048077 Gm7544A0A1Y7VJ58 118 aa2.09□□□□□ -2.08
Lime1-201ENSMUST00000048077 A030014E15RikA0A1Y7VJV2 120 aa2.03□□□□□ -2.08
Lime1-201ENSMUST00000048077 A030003K21RikA0A1Y7VIM3 128 aa1.94□□□□□ -2.1
Lime1-201ENSMUST00000048077 Krtap5-1Q64507 230 aa1.83□□□□□ -2.12
Lime1-201ENSMUST00000048077 Gm6217A0A1Y7VJK9 128 aa1.74□□□□□ -2.13
Lime1-201ENSMUST00000048077 Gm4559A4IF42 199 aa1.45□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 11.5 ms