RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Lce3bQ9CQM7 98 aa4□□□□□ -1.77
Rnf4-201ENSMUST00000030992 Gm10100J3QK64 120 aa3.97□□□□□ -1.77
Rnf4-201ENSMUST00000030992 Syne2Q6ZWQ0 6874 aaKnown RBP3.97□□□□□ -1.77
Rnf4-201ENSMUST00000030992 A0A286YCP9 139 aa3.97□□□□□ -1.77
Rnf4-201ENSMUST00000030992 Gm11596B1AQB0 205 aa3.93□□□□□ -1.78
Rnf4-201ENSMUST00000030992 Lce1bQ9D149 137 aa3.92□□□□□ -1.78
Rnf4-201ENSMUST00000030992 Gm11564A2A4L9 201 aa3.91□□□□□ -1.78
Rnf4-201ENSMUST00000030992 Gm11563B1AQ90 168 aa3.91□□□□□ -1.78
Rnf4-201ENSMUST00000030992 Gm11595B1AQA7 289 aa3.91□□□□□ -1.78
Rnf4-201ENSMUST00000030992 Krtap4-8B1AQA8 209 aa3.91□□□□□ -1.78
Rnf4-201ENSMUST00000030992 Gm10142J3KMP7 120 aa3.89□□□□□ -1.79
Rnf4-201ENSMUST00000030992 Mt4P47945 62 aa3.88□□□□□ -1.79
Rnf4-201ENSMUST00000030992 A030003K21RikA0A1Y7VIM3 128 aa3.88□□□□□ -1.79
Rnf4-201ENSMUST00000030992 Gm6217A0A1Y7VJK9 128 aa3.88□□□□□ -1.79
Rnf4-201ENSMUST00000030992 Gm38119A0A0A6YX29 146 aa3.84□□□□□ -1.79
Rnf4-201ENSMUST00000030992 Krtap4-9B1AQA9 244 aa3.82□□□□□ -1.8
Rnf4-201ENSMUST00000030992 Sprr2hO70559 108 aa3.82□□□□□ -1.8
Rnf4-201ENSMUST00000030992 Fsip2A2ARZ3 6995 aa3.8□□□□□ -1.8
Rnf4-201ENSMUST00000030992 Lce3cQ91V05 98 aa3.8□□□□□ -1.8
Rnf4-201ENSMUST00000030992 Lce3eF8VQJ0 98 aa3.79□□□□□ -1.8
Rnf4-201ENSMUST00000030992 Lce3fQ6PAI4 98 aa3.79□□□□□ -1.8
Rnf4-201ENSMUST00000030992 Lce3dE9Q8V1 98 aa3.77□□□□□ -1.81
Rnf4-201ENSMUST00000030992 ObscnA2AAJ9 8891 aaKnown RBP3.74□□□□□ -1.81
Rnf4-201ENSMUST00000030992 Sprr2iO70560 76 aa3.74□□□□□ -1.81
Rnf4-201ENSMUST00000030992 A0A1Y7VJ07 166 aa3.72□□□□□ -1.81
Rnf4-201ENSMUST00000030992 2300003K06RikA2A4M0 262 aa3.71□□□□□ -1.82
Rnf4-201ENSMUST00000030992 Sprr2eO70556 76 aa3.7□□□□□ -1.82
Rnf4-201ENSMUST00000030992 Krtap4-13Q9D7P3 165 aa3.69□□□□□ -1.82
Rnf4-201ENSMUST00000030992 Mt1P02802 61 aaKnown RBP3.68□□□□□ -1.82
Rnf4-201ENSMUST00000030992 Sprr2kO70562 68 aa3.63□□□□□ -1.83
Rnf4-201ENSMUST00000030992 Lce1kJ3QP15 125 aa3.63□□□□□ -1.83
Rnf4-201ENSMUST00000030992 Lce3aQ497I5 98 aa3.62□□□□□ -1.83
Rnf4-201ENSMUST00000030992 Lce1lQ9D1G7 135 aa3.59□□□□□ -1.83
Rnf4-201ENSMUST00000030992 Krtap4-7Q9D732 168 aa3.57□□□□□ -1.84
Rnf4-201ENSMUST00000030992 A030014E15RikA0A1Y7VJV2 120 aa3.55□□□□□ -1.84
Rnf4-201ENSMUST00000030992 Gm11568A2A4M2 211 aa3.54□□□□□ -1.84
Rnf4-201ENSMUST00000030992 Sprr2fO70557 76 aa3.54□□□□□ -1.84
Rnf4-201ENSMUST00000030992 Krtap9-1Q64526 186 aa3.54□□□□□ -1.84
Rnf4-201ENSMUST00000030992 Krtap31-1Q9D644 177 aa3.49□□□□□ -1.85
Rnf4-201ENSMUST00000030992 Krtap5-2Q9D5Z7 189 aa3.48□□□□□ -1.85
Rnf4-201ENSMUST00000030992 Krtap6-3A0A087WQL6 57 aa3.44□□□□□ -1.86
Rnf4-201ENSMUST00000030992 Krtap20-2E9Q0A8 60 aa3.44□□□□□ -1.86
Rnf4-201ENSMUST00000030992 Gm10153A0A1B0GRL1 320 aa3.38□□□□□ -1.87
Rnf4-201ENSMUST00000030992 Krtap4-16Q91W93 202 aa3.26□□□□□ -1.89
Rnf4-201ENSMUST00000030992 Mt3P28184 68 aa3.22□□□□□ -1.89
Rnf4-201ENSMUST00000030992 Gm45337A0A1B0GS71 263 aa3.19□□□□□ -1.9
Rnf4-201ENSMUST00000030992 Gm10024A0A0A0MQA4 119 aa3.18□□□□□ -1.9
Rnf4-201ENSMUST00000030992 Gm4553A0A1B0GSA9 284 aa3.18□□□□□ -1.9
Rnf4-201ENSMUST00000030992 Macf1Q9QXZ0 7354 aaKnown RBP3.15□□□□□ -1.9
Rnf4-201ENSMUST00000030992 Gm11559Q9D3H7 191 aa3.11□□□□□ -1.91
Rnf4-201ENSMUST00000030992 Hmcn1D3YXG0 5634 aa3.1□□□□□ -1.91
Rnf4-201ENSMUST00000030992 Gm40460A0A1B0GR10 244 aa3.1□□□□□ -1.91
Rnf4-201ENSMUST00000030992 Gm7579A0A1B0GRJ4 243 aa3.1□□□□□ -1.91
Rnf4-201ENSMUST00000030992 Krtap5-5Q2TA51 241 aa3.1□□□□□ -1.91
Rnf4-201ENSMUST00000030992 Krtap5-4Q62220 223 aa3.1□□□□□ -1.91
Rnf4-201ENSMUST00000030992 Gm2431E9Q8S1 172 aa3.07□□□□□ -1.92
Rnf4-201ENSMUST00000030992 Eppk1Q8R0W0 6548 aa3.04□□□□□ -1.92
Rnf4-201ENSMUST00000030992 Kmt2dQ6PDK2 5588 aa3.01□□□□□ -1.93
Rnf4-201ENSMUST00000030992 Gm11554B1AQB2 190 aa2.96□□□□□ -1.94
Rnf4-201ENSMUST00000030992 Gm11639A0A1D5RLM8 5808 aa2.86□□□□□ -1.95
Rnf4-201ENSMUST00000030992 Muc16A0A140LJ72 8478 aa2.85□□□□□ -1.95
Rnf4-201ENSMUST00000030992 Gm39115A0A1B0GSH7 232 aa2.83□□□□□ -1.96
Rnf4-201ENSMUST00000030992 1110025L11RikO09048 78 aa2.81□□□□□ -1.96
Rnf4-201ENSMUST00000030992 Krtap6-5Q925H3 78 aa2.81□□□□□ -1.96
Rnf4-201ENSMUST00000030992 Gpr98Q8VHN7 6298 aaKnown RBP2.77□□□□□ -1.97
Rnf4-201ENSMUST00000030992 Muc19Q6PZE0 7524 aa2.71□□□□□ -1.97
Rnf4-201ENSMUST00000030992 DstQ91ZU6 7393 aaKnown RBP2.66□□□□□ -1.98
Rnf4-201ENSMUST00000030992 AhnakE9Q616 5656 aaKnown RBP2.57□□□□□ -2
Rnf4-201ENSMUST00000030992 Sprr2bO70554 98 aa2.57□□□□□ -2
Rnf4-201ENSMUST00000030992 Gm45618A0A1B0GSA0 219 aa2.52□□□□□ -2.01
Rnf4-201ENSMUST00000030992 Gm10229O08631 77 aa2.47□□□□□ -2.01
Rnf4-201ENSMUST00000030992 NebE9Q1W3 7152 aa2.44□□□□□ -2.02
Rnf4-201ENSMUST00000030992 Gm11567Q9D141 195 aa2.38□□□□□ -2.03
Rnf4-201ENSMUST00000030992 Krtap31-2Q8CAY5 177 aa2.36□□□□□ -2.03
Rnf4-201ENSMUST00000030992 Gm29735A0A1B0GT06 219 aa2.35□□□□□ -2.03
Rnf4-201ENSMUST00000030992 Krtap21-1Q925H4 128 aa2.33□□□□□ -2.04
Rnf4-201ENSMUST00000030992 Phgr1Q8K0G7 91 aa2.25□□□□□ -2.05
Rnf4-201ENSMUST00000030992 Krtap6-2O08884 159 aa2.09□□□□□ -2.08
Rnf4-201ENSMUST00000030992 Krtap5-1Q64507 230 aa1.78□□□□□ -2.12
Rnf4-201ENSMUST00000030992 Gm4559A4IF42 199 aa1.68□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 8.1 ms